RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 HIST1H4GQ99525 98 aa5.61□□□□□ -1.51
SF3A3-204ENST00000462258 F8WEM9 126 aa5.6□□□□□ -1.51
SF3A3-204ENST00000462258 LINC00575Q6W349 94 aa5.6□□□□□ -1.51
SF3A3-204ENST00000462258 A0A0G2JQZ4 141 aa5.59□□□□□ -1.51
SF3A3-204ENST00000462258 hADV29S1A0JD25 119 aa5.59□□□□□ -1.51
SF3A3-204ENST00000462258 Q5XG85 94 aa5.59□□□□□ -1.51
SF3A3-204ENST00000462258 Q6ZQY7 126 aa5.59□□□□□ -1.51
SF3A3-204ENST00000462258 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
SF3A3-204ENST00000462258 DLEU1O43261 78 aa5.58□□□□□ -1.52
SF3A3-204ENST00000462258 BVES-AS1Q5T3Y7 98 aa5.58□□□□□ -1.52
SF3A3-204ENST00000462258 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
SF3A3-204ENST00000462258 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
SF3A3-204ENST00000462258 PAM16Q9Y3D7 125 aa5.57□□□□□ -1.52
SF3A3-204ENST00000462258 C14orf144Q96I85 54 aa5.56□□□□□ -1.52
SF3A3-204ENST00000462258 C1orf195Q5TG92 126 aa5.55□□□□□ -1.52
SF3A3-204ENST00000462258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-204ENST00000462258 CLEC2BQ92478 149 aa5.55□□□□□ -1.52
SF3A3-204ENST00000462258 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
SF3A3-204ENST00000462258 HIGD1BQ9P298 99 aa5.55□□□□□ -1.52
SF3A3-204ENST00000462258 TCL1BO95988 128 aa5.54□□□□□ -1.52
SF3A3-204ENST00000462258 Q6JHZ5 121 aa5.54□□□□□ -1.52
SF3A3-204ENST00000462258 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
SF3A3-204ENST00000462258 RAB37Q96AX2 223 aa5.54□□□□□ -1.52
SF3A3-204ENST00000462258 IGLV8-61A0A075B6I0 122 aa5.53□□□□□ -1.52
SF3A3-204ENST00000462258 A0A0B4J2C4 111 aa5.53□□□□□ -1.52
SF3A3-204ENST00000462258 CFC1BP0CG36 223 aa5.53□□□□□ -1.52
SF3A3-204ENST00000462258 CFC1P0CG37 223 aa5.53□□□□□ -1.52
SF3A3-204ENST00000462258 IGFL1Q6UW32 110 aa5.53□□□□□ -1.52
SF3A3-204ENST00000462258 PPDPFLQ8WWR9 84 aa5.53□□□□□ -1.52
SF3A3-204ENST00000462258 PCOTHQ58A44 107 aa5.52□□□□□ -1.53
SF3A3-204ENST00000462258 TRBV7-7A0A0K0K1E9 115 aa5.51□□□□□ -1.53
SF3A3-204ENST00000462258 OCIAD2Q56VL3 154 aa5.5□□□□□ -1.53
SF3A3-204ENST00000462258 CEND1Q8N111 149 aa5.5□□□□□ -1.53
SF3A3-204ENST00000462258 H3BUT2 72 aa5.49□□□□□ -1.53
SF3A3-204ENST00000462258 SNHG12Q9BXW3 62 aa5.49□□□□□ -1.53
SF3A3-204ENST00000462258 H0YGX0 51 aa5.48□□□□□ -1.53
SF3A3-204ENST00000462258 SNCGO76070 127 aa5.48□□□□□ -1.53
SF3A3-204ENST00000462258 RPL37P61927 97 aaKnown RBP5.48□□□□□ -1.53
SF3A3-204ENST00000462258 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
SF3A3-204ENST00000462258 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
SF3A3-204ENST00000462258 FXYD2P54710 66 aa5.47□□□□□ -1.53
SF3A3-204ENST00000462258 PRO1854Q9UHT4 67 aa5.46□□□□□ -1.54
SF3A3-204ENST00000462258 PYY3Q5JQD4 70 aa5.45□□□□□ -1.54
SF3A3-204ENST00000462258 A0A1B0GX51 115 aa5.44□□□□□ -1.54
SF3A3-204ENST00000462258 TRIAP1O43715 76 aa5.44□□□□□ -1.54
SF3A3-204ENST00000462258 HSD52Q0P140 79 aa5.44□□□□□ -1.54
SF3A3-204ENST00000462258 SS18L2Q9UHA2 77 aa5.44□□□□□ -1.54
SF3A3-204ENST00000462258 LST1O00453 97 aa5.43□□□□□ -1.54
SF3A3-204ENST00000462258 NDUFV3P56181 108 aaKnown RBP5.43□□□□□ -1.54
SF3A3-204ENST00000462258 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
SF3A3-204ENST00000462258 Q6Q795 121 aa5.43□□□□□ -1.54
SF3A3-204ENST00000462258 K7ERJ3 54 aa5.42□□□□□ -1.54
SF3A3-204ENST00000462258 TMA7Q9Y2S6 64 aaKnown RBP5.42□□□□□ -1.54
SF3A3-204ENST00000462258 H3BMG7 143 aa5.41□□□□□ -1.54
SF3A3-204ENST00000462258 FABP2P12104 132 aa5.41□□□□□ -1.54
SF3A3-204ENST00000462258 TEN1Q86WV5 123 aa5.41□□□□□ -1.54
SF3A3-204ENST00000462258 OBSCN-AS1Q96MR7 158 aa5.41□□□□□ -1.54
SF3A3-204ENST00000462258 A0A087WSZ3 146 aa5.4□□□□□ -1.54
SF3A3-204ENST00000462258 DNAL4O96015 105 aa5.4□□□□□ -1.54
SF3A3-204ENST00000462258 PSMB2P49721 201 aa5.39□□□□□ -1.55
SF3A3-204ENST00000462258 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
SF3A3-204ENST00000462258 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
SF3A3-204ENST00000462258 MT1HP80294 61 aa5.38□□□□□ -1.55
SF3A3-204ENST00000462258 ORMDL1Q9P0S3 153 aa5.38□□□□□ -1.55
SF3A3-204ENST00000462258 A0A1B0GV72 72 aa5.37□□□□□ -1.55
SF3A3-204ENST00000462258 Q75L30 129 aa5.37□□□□□ -1.55
SF3A3-204ENST00000462258 A0A1W2PNM2 257 aa5.36□□□□□ -1.55
SF3A3-204ENST00000462258 COX6CP09669 75 aa5.36□□□□□ -1.55
SF3A3-204ENST00000462258 Q96NJ1 140 aa5.36□□□□□ -1.55
SF3A3-204ENST00000462258 H3BQ85 93 aa5.35□□□□□ -1.55
SF3A3-204ENST00000462258 H3BS24 57 aa5.35□□□□□ -1.55
SF3A3-204ENST00000462258 COX6B2Q6YFQ2 88 aa5.35□□□□□ -1.55
SF3A3-204ENST00000462258 ATP11AUNQ6ZP68 121 aa5.35□□□□□ -1.55
SF3A3-204ENST00000462258 SIGMAR1Q99720 223 aa5.35□□□□□ -1.55
SF3A3-204ENST00000462258 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-204ENST00000462258 ANKRD29Q8N6D5 301 aa5.34□□□□□ -1.55
SF3A3-204ENST00000462258 TMEM256-PLSCR3K7ERE1 68 aa5.33□□□□□ -1.56
SF3A3-204ENST00000462258 TRBV7-4A0A0J9YYF1 115 aa5.32□□□□□ -1.56
SF3A3-204ENST00000462258 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
SF3A3-204ENST00000462258 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-204ENST00000462258 TRACP01848 142 aa5.31□□□□□ -1.56
SF3A3-204ENST00000462258 DSCR10P59022 87 aa5.31□□□□□ -1.56
SF3A3-204ENST00000462258 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
SF3A3-204ENST00000462258 A8MUU9 505 aa5.3□□□□□ -1.56
SF3A3-204ENST00000462258 CCKP06307 115 aa5.3□□□□□ -1.56
SF3A3-204ENST00000462258 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
SF3A3-204ENST00000462258 M0R2T5 61 aa5.29□□□□□ -1.56
SF3A3-204ENST00000462258 IGKV4-1P06312 121 aa5.29□□□□□ -1.56
SF3A3-204ENST00000462258 SCGB1C2P0DMR2 95 aa5.29□□□□□ -1.56
SF3A3-204ENST00000462258 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
SF3A3-204ENST00000462258 VPS25Q9BRG1 176 aa5.27□□□□□ -1.57
SF3A3-204ENST00000462258 M0R143 59 aa5.26□□□□□ -1.57
SF3A3-204ENST00000462258 LINC00313P59037 77 aa5.26□□□□□ -1.57
SF3A3-204ENST00000462258 LINC00472Q9H8W2 130 aa5.26□□□□□ -1.57
SF3A3-204ENST00000462258 RBM3P98179 157 aaKnown RBP5.25□□□□□ -1.57
SF3A3-204ENST00000462258 DEFB116Q30KQ4 102 aa5.25□□□□□ -1.57
SF3A3-204ENST00000462258 DSCR8Q96T75 97 aa5.25□□□□□ -1.57
SF3A3-204ENST00000462258 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
SF3A3-204ENST00000462258 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
SF3A3-204ENST00000462258 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms