RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 VAMP3Q15836 100 aa8.36□□□□□ -1.07
NUP50-213ENST00000461437 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
NUP50-213ENST00000461437 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
NUP50-213ENST00000461437 F8WEM9 126 aa8.34□□□□□ -1.07
NUP50-213ENST00000461437 COX8AP10176 69 aa8.33□□□□□ -1.08
NUP50-213ENST00000461437 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
NUP50-213ENST00000461437 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
NUP50-213ENST00000461437 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
NUP50-213ENST00000461437 C14orf144Q96I85 54 aa8.32□□□□□ -1.08
NUP50-213ENST00000461437 H3BUT2 72 aa8.29□□□□□ -1.08
NUP50-213ENST00000461437 TCL1BO95988 128 aa8.29□□□□□ -1.08
NUP50-213ENST00000461437 PAM16Q9Y3D7 125 aa8.29□□□□□ -1.08
NUP50-213ENST00000461437 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
NUP50-213ENST00000461437 CFC1P0CG37 223 aa8.28□□□□□ -1.08
NUP50-213ENST00000461437 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
NUP50-213ENST00000461437 OCIAD2Q56VL3 154 aa8.28□□□□□ -1.08
NUP50-213ENST00000461437 CLEC2BQ92478 149 aa8.28□□□□□ -1.08
NUP50-213ENST00000461437 TRBV7-7A0A0K0K1E9 115 aa8.27□□□□□ -1.09
NUP50-213ENST00000461437 MT1HP80294 61 aa8.27□□□□□ -1.09
NUP50-213ENST00000461437 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.09
NUP50-213ENST00000461437 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
NUP50-213ENST00000461437 BVES-AS1Q5T3Y7 98 aa8.26□□□□□ -1.09
NUP50-213ENST00000461437 DLEU1O43261 78 aa8.25□□□□□ -1.09
NUP50-213ENST00000461437 Q6JHZ5 121 aa8.25□□□□□ -1.09
NUP50-213ENST00000461437 C2orf91Q6ZV80 131 aa8.25□□□□□ -1.09
NUP50-213ENST00000461437 FAM218AQ96MZ4 157 aa8.25□□□□□ -1.09
NUP50-213ENST00000461437 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
NUP50-213ENST00000461437 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
NUP50-213ENST00000461437 VAMP8Q9BV40 100 aa8.22□□□□□ -1.09
NUP50-213ENST00000461437 FLGP20930 4061 aaPredicted RBP8.21□□□□□ -1.1
NUP50-213ENST00000461437 OBSCN-AS1Q96MR7 158 aa8.2□□□□□ -1.1
NUP50-213ENST00000461437 HIGD1BQ9P298 99 aa8.2□□□□□ -1.1
NUP50-213ENST00000461437 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
NUP50-213ENST00000461437 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
NUP50-213ENST00000461437 FXYD2P54710 66 aa8.16□□□□□ -1.1
NUP50-213ENST00000461437 CEND1Q8N111 149 aa8.16□□□□□ -1.1
NUP50-213ENST00000461437 LST1O00453 97 aa8.15□□□□□ -1.1
NUP50-213ENST00000461437 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
NUP50-213ENST00000461437 H0YGX0 51 aa8.14□□□□□ -1.11
NUP50-213ENST00000461437 SNCGO76070 127 aa8.13□□□□□ -1.11
NUP50-213ENST00000461437 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
NUP50-213ENST00000461437 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
NUP50-213ENST00000461437 A0A1B0GV72 72 aa8.12□□□□□ -1.11
NUP50-213ENST00000461437 TRIAP1O43715 76 aa8.12□□□□□ -1.11
NUP50-213ENST00000461437 A0A087WSZ3 146 aa8.11□□□□□ -1.11
NUP50-213ENST00000461437 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
NUP50-213ENST00000461437 A6NJY4 79 aa8.11□□□□□ -1.11
NUP50-213ENST00000461437 FABP2P12104 132 aa8.11□□□□□ -1.11
NUP50-213ENST00000461437 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
NUP50-213ENST00000461437 Q96NJ1 140 aa8.11□□□□□ -1.11
NUP50-213ENST00000461437 H3BMG7 143 aa8.1□□□□□ -1.11
NUP50-213ENST00000461437 K7ERJ3 54 aa8.1□□□□□ -1.11
NUP50-213ENST00000461437 M0R2T5 61 aa8.1□□□□□ -1.11
NUP50-213ENST00000461437 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
NUP50-213ENST00000461437 Q6Q795 121 aa8.09□□□□□ -1.11
NUP50-213ENST00000461437 Q75L30 129 aa8.09□□□□□ -1.11
NUP50-213ENST00000461437 TEN1Q86WV5 123 aa8.09□□□□□ -1.11
NUP50-213ENST00000461437 PYY3Q5JQD4 70 aa8.08□□□□□ -1.12
NUP50-213ENST00000461437 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
NUP50-213ENST00000461437 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
NUP50-213ENST00000461437 SS18L2Q9UHA2 77 aa8.07□□□□□ -1.12
NUP50-213ENST00000461437 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
NUP50-213ENST00000461437 DSCR10P59022 87 aa8.05□□□□□ -1.12
NUP50-213ENST00000461437 A0A1B0GX51 115 aa8.04□□□□□ -1.12
NUP50-213ENST00000461437 HSD52Q0P140 79 aa8.03□□□□□ -1.12
NUP50-213ENST00000461437 GHRHP01286 108 aa8.02□□□□□ -1.13
NUP50-213ENST00000461437 PSMB2P49721 201 aa8.02□□□□□ -1.13
NUP50-213ENST00000461437 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
NUP50-213ENST00000461437 C20orf166-AS1Q96NR2 134 aa8.01□□□□□ -1.13
NUP50-213ENST00000461437 A8MUU9 505 aa8□□□□□ -1.13
NUP50-213ENST00000461437 DNAL4O96015 105 aa7.99□□□□□ -1.13
NUP50-213ENST00000461437 DEFB116Q30KQ4 102 aa7.99□□□□□ -1.13
NUP50-213ENST00000461437 ORMDL1Q9P0S3 153 aa7.99□□□□□ -1.13
NUP50-213ENST00000461437 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
NUP50-213ENST00000461437 UQCR10Q9UDW1 63 aa7.98□□□□□ -1.13
NUP50-213ENST00000461437 IGKV4-1P06312 121 aa7.96□□□□□ -1.14
NUP50-213ENST00000461437 COX6CP09669 75 aa7.96□□□□□ -1.14
NUP50-213ENST00000461437 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.14
NUP50-213ENST00000461437 KRTAP16-1A8MUX0 517 aa7.94□□□□□ -1.14
NUP50-213ENST00000461437 TRBV7-4A0A0J9YYF1 115 aa7.93□□□□□ -1.14
NUP50-213ENST00000461437 CCKP06307 115 aa7.92□□□□□ -1.14
NUP50-213ENST00000461437 H3BQ85 93 aa7.91□□□□□ -1.14
NUP50-213ENST00000461437 TMEM256-PLSCR3K7ERE1 68 aa7.91□□□□□ -1.14
NUP50-213ENST00000461437 LINC00313P59037 77 aa7.91□□□□□ -1.14
NUP50-213ENST00000461437 VPS25Q9BRG1 176 aa7.91□□□□□ -1.14
NUP50-213ENST00000461437 TRACP01848 142 aa7.9□□□□□ -1.14
NUP50-213ENST00000461437 LINC00472Q9H8W2 130 aa7.89□□□□□ -1.15
NUP50-213ENST00000461437 IGHV6-1A0A0B4J1U7 121 aa7.88□□□□□ -1.15
NUP50-213ENST00000461437 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
NUP50-213ENST00000461437 UBE2V1Q13404 147 aa7.87□□□□□ -1.15
NUP50-213ENST00000461437 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
NUP50-213ENST00000461437 TRBV20-1A0A075B6N2 111 aa7.84□□□□□ -1.15
NUP50-213ENST00000461437 RBM3P98179 157 aaKnown RBP7.82□□□□□ -1.16
NUP50-213ENST00000461437 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
NUP50-213ENST00000461437 BAALC-AS2P0C853 105 aa7.81□□□□□ -1.16
NUP50-213ENST00000461437 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
NUP50-213ENST00000461437 FAM236DA0A1B0GTK5 79 aa7.8□□□□□ -1.16
NUP50-213ENST00000461437 FAM236CP0DP71 79 aa7.8□□□□□ -1.16
NUP50-213ENST00000461437 HRES1P13985 223 aa7.8□□□□□ -1.16
NUP50-213ENST00000461437 DSCR8Q96T75 97 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 273.8 ms