RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 C3orf79P0CE67 100 aa11.33□□□□□ -0.6
HMG20B-207ENST00000461099 TRBV7-7A0A0K0K1E9 115 aa11.32□□□□□ -0.6
HMG20B-207ENST00000461099 CFC1P0CG37 223 aa11.32□□□□□ -0.6
HMG20B-207ENST00000461099 Q6JHZ5 121 aa11.31□□□□□ -0.6
HMG20B-207ENST00000461099 CLEC2BQ92478 149 aa11.3□□□□□ -0.6
HMG20B-207ENST00000461099 KRTAP9-8Q9BYQ0 159 aa11.3□□□□□ -0.6
HMG20B-207ENST00000461099 VAMP3Q15836 100 aa11.29□□□□□ -0.6
HMG20B-207ENST00000461099 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
HMG20B-207ENST00000461099 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
HMG20B-207ENST00000461099 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
HMG20B-207ENST00000461099 KRTDAPP60985 99 aa11.27□□□□□ -0.61
HMG20B-207ENST00000461099 SLC7A5P1Q8MH63 180 aa11.27□□□□□ -0.61
HMG20B-207ENST00000461099 Q6ZQY7 126 aa11.26□□□□□ -0.61
HMG20B-207ENST00000461099 C20orf202A1L168 122 aa11.25□□□□□ -0.61
HMG20B-207ENST00000461099 OCIAD2Q56VL3 154 aa11.25□□□□□ -0.61
HMG20B-207ENST00000461099 USH2AO75445 5202 aa11.23□□□□□ -0.61
HMG20B-207ENST00000461099 hADV29S1A0JD25 119 aa11.23□□□□□ -0.61
HMG20B-207ENST00000461099 Q96NJ1 140 aa11.23□□□□□ -0.61
HMG20B-207ENST00000461099 SSPOA2VEC9 5147 aa11.22□□□□□ -0.61
HMG20B-207ENST00000461099 LST1O00453 97 aa11.2□□□□□ -0.62
HMG20B-207ENST00000461099 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
HMG20B-207ENST00000461099 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
HMG20B-207ENST00000461099 C20orf166-AS1Q96NR2 134 aa11.16□□□□□ -0.62
HMG20B-207ENST00000461099 COA6Q5JTJ3 125 aaKnown RBP11.15□□□□□ -0.62
HMG20B-207ENST00000461099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-207ENST00000461099 A8MUU9 505 aa11.12□□□□□ -0.63
HMG20B-207ENST00000461099 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
HMG20B-207ENST00000461099 SNHG12Q9BXW3 62 aa11.12□□□□□ -0.63
HMG20B-207ENST00000461099 H3BUT2 72 aa11.1□□□□□ -0.63
HMG20B-207ENST00000461099 SCGB1D1O95968 90 aa11.09□□□□□ -0.63
HMG20B-207ENST00000461099 SS18L2Q9UHA2 77 aa11.08□□□□□ -0.64
HMG20B-207ENST00000461099 MT2AP02795 61 aa11.07□□□□□ -0.64
HMG20B-207ENST00000461099 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
HMG20B-207ENST00000461099 FCGBPQ9Y6R7 5405 aaPredicted RBP11.07□□□□□ -0.64
HMG20B-207ENST00000461099 BVES-AS1Q5T3Y7 98 aa11.04□□□□□ -0.64
HMG20B-207ENST00000461099 KRTAP19-1Q8IUB9 90 aa11.02□□□□□ -0.65
HMG20B-207ENST00000461099 LCE2BO14633 110 aa11.01□□□□□ -0.65
HMG20B-207ENST00000461099 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
HMG20B-207ENST00000461099 FAM236DA0A1B0GTK5 79 aa10.98□□□□□ -0.65
HMG20B-207ENST00000461099 MT1FP04733 61 aa10.98□□□□□ -0.65
HMG20B-207ENST00000461099 FAM236CP0DP71 79 aa10.98□□□□□ -0.65
HMG20B-207ENST00000461099 DSCR10P59022 87 aa10.97□□□□□ -0.65
HMG20B-207ENST00000461099 C12orf57Q99622 126 aa10.97□□□□□ -0.65
HMG20B-207ENST00000461099 A0A087WSZ3 146 aa10.96□□□□□ -0.65
HMG20B-207ENST00000461099 KRTAP9-3Q9BYQ3 159 aa10.96□□□□□ -0.65
HMG20B-207ENST00000461099 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
HMG20B-207ENST00000461099 KRTAP10-10P60014 251 aa10.94□□□□□ -0.66
HMG20B-207ENST00000461099 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
HMG20B-207ENST00000461099 NDUFV3P56181 108 aaKnown RBP10.92□□□□□ -0.66
HMG20B-207ENST00000461099 SNCGO76070 127 aa10.9□□□□□ -0.66
HMG20B-207ENST00000461099 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.66
HMG20B-207ENST00000461099 MPLKIPQ8TAP9 179 aa10.89□□□□□ -0.67
HMG20B-207ENST00000461099 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
HMG20B-207ENST00000461099 LINC00313P59037 77 aa10.88□□□□□ -0.67
HMG20B-207ENST00000461099 SIGMAR1Q99720 223 aa10.87□□□□□ -0.67
HMG20B-207ENST00000461099 H3BMG7 143 aa10.86□□□□□ -0.67
HMG20B-207ENST00000461099 HRES1P13985 223 aa10.86□□□□□ -0.67
HMG20B-207ENST00000461099 H0YGX0 51 aa10.84□□□□□ -0.67
HMG20B-207ENST00000461099 FAM218AQ96MZ4 157 aa10.84□□□□□ -0.67
HMG20B-207ENST00000461099 HIST1H2BLQ99880 126 aa10.82□□□□□ -0.68
HMG20B-207ENST00000461099 A0A1W2PNM2 257 aa10.81□□□□□ -0.68
HMG20B-207ENST00000461099 IGKV4-1P06312 121 aa10.8□□□□□ -0.68
HMG20B-207ENST00000461099 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
HMG20B-207ENST00000461099 HIST3H2BBQ8N257 126 aa10.8□□□□□ -0.68
HMG20B-207ENST00000461099 RAB37Q96AX2 223 aa10.79□□□□□ -0.68
HMG20B-207ENST00000461099 GHRHP01286 108 aa10.78□□□□□ -0.68
HMG20B-207ENST00000461099 FABP2P12104 132 aa10.78□□□□□ -0.68
HMG20B-207ENST00000461099 S100A2P29034 98 aa10.78□□□□□ -0.68
HMG20B-207ENST00000461099 MACF1Q9UPN3 7388 aaKnown RBP10.77□□□□□ -0.69
HMG20B-207ENST00000461099 COX8AP10176 69 aa10.75□□□□□ -0.69
HMG20B-207ENST00000461099 LINC00846Q9NV44 126 aa10.75□□□□□ -0.69
HMG20B-207ENST00000461099 A0A1B0GX51 115 aa10.73□□□□□ -0.69
HMG20B-207ENST00000461099 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
HMG20B-207ENST00000461099 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
HMG20B-207ENST00000461099 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
HMG20B-207ENST00000461099 DLEU1O43261 78 aa10.7□□□□□ -0.7
HMG20B-207ENST00000461099 DEFB116Q30KQ4 102 aa10.7□□□□□ -0.7
HMG20B-207ENST00000461099 KRTAP19-6Q3LI70 58 aa10.7□□□□□ -0.7
HMG20B-207ENST00000461099 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
HMG20B-207ENST00000461099 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
HMG20B-207ENST00000461099 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
HMG20B-207ENST00000461099 LINC00472Q9H8W2 130 aa10.68□□□□□ -0.7
HMG20B-207ENST00000461099 HIGD1BQ9P298 99 aa10.64□□□□□ -0.71
HMG20B-207ENST00000461099 A0A1B0GV72 72 aa10.62□□□□□ -0.71
HMG20B-207ENST00000461099 C14orf144Q96I85 54 aa10.62□□□□□ -0.71
HMG20B-207ENST00000461099 PRO1854Q9UHT4 67 aa10.62□□□□□ -0.71
HMG20B-207ENST00000461099 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
HMG20B-207ENST00000461099 TRIAP1O43715 76 aa10.58□□□□□ -0.72
HMG20B-207ENST00000461099 TRACP01848 142 aa10.58□□□□□ -0.72
HMG20B-207ENST00000461099 CCKP06307 115 aa10.58□□□□□ -0.72
HMG20B-207ENST00000461099 S100A6P06703 90 aa10.58□□□□□ -0.72
HMG20B-207ENST00000461099 H3BQ85 93 aa10.57□□□□□ -0.72
HMG20B-207ENST00000461099 SPINK7P58062 85 aa10.57□□□□□ -0.72
HMG20B-207ENST00000461099 ZCCHC13Q8WW36 166 aaKnown RBP10.57□□□□□ -0.72
HMG20B-207ENST00000461099 ORMDL1Q9P0S3 153 aa10.57□□□□□ -0.72
HMG20B-207ENST00000461099 A0A1B0GVX0 72 aa10.56□□□□□ -0.72
HMG20B-207ENST00000461099 DNAL4O96015 105 aa10.56□□□□□ -0.72
HMG20B-207ENST00000461099 CEND1Q8N111 149 aa10.56□□□□□ -0.72
HMG20B-207ENST00000461099 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
HMG20B-207ENST00000461099 A8MWP4 228 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms