RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 SNHG12Q9BXW3 62 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 LAMTOR3Q9UHA4 124 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 DNAH2Q9P225 4427 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 F8WEM9 126 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 FABP2P12104 132 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 ATXN8Q156A1 80 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 FRAS1Q86XX4 4008 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 DEFB105AQ8NG35 78 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 Q9BRP9 147 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 PKD1P98161 4303 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
NUP98-208ENST00000461047 RYR3Q15413 4870 aa3.56□□□□□ -1.84
NUP98-208ENST00000461047 H3BUT2 72 aa3.56□□□□□ -1.84
NUP98-208ENST00000461047 TRACP01848 142 aa3.56□□□□□ -1.84
NUP98-208ENST00000461047 PCP4P48539 62 aa3.56□□□□□ -1.84
NUP98-208ENST00000461047 LINC01600Q96MT4 127 aa3.56□□□□□ -1.84
NUP98-208ENST00000461047 HECTD4Q9Y4D8 3996 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 TMEM256-PLSCR3K7ERE1 68 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 ERC2-IT1O76042 136 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 LINC00483Q53H64 154 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 Q6ZQY7 126 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 SSBP3-AS1Q7Z2R9 100 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 ORMDL1Q9P0S3 153 aa3.55□□□□□ -1.84
NUP98-208ENST00000461047 IGLV5-48A0A075B6I7 105 aa3.54□□□□□ -1.84
NUP98-208ENST00000461047 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
NUP98-208ENST00000461047 SPRR1BP22528 89 aa3.54□□□□□ -1.84
NUP98-208ENST00000461047 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
NUP98-208ENST00000461047 ST20-AS1Q8NBB2 130 aa3.54□□□□□ -1.84
NUP98-208ENST00000461047 LST1O00453 97 aa3.53□□□□□ -1.84
NUP98-208ENST00000461047 TAX1BP3O14907 124 aa3.53□□□□□ -1.84
NUP98-208ENST00000461047 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
NUP98-208ENST00000461047 C9orf153Q5TBE3 101 aa3.53□□□□□ -1.84
NUP98-208ENST00000461047 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
NUP98-208ENST00000461047 GTF2H5Q6ZYL4 71 aa3.53□□□□□ -1.84
NUP98-208ENST00000461047 NAA38Q9BRA0 125 aaKnown RBP3.53□□□□□ -1.84
NUP98-208ENST00000461047 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 TCL1BO95988 128 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 BAALC-AS2P0C853 105 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 NDUFV3P56181 108 aaKnown RBP3.52□□□□□ -1.85
NUP98-208ENST00000461047 Q6JHZ5 121 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 Q8N377 158 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 Q8NBF4 154 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 FAM218AQ96MZ4 157 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
NUP98-208ENST00000461047 UBE2V1Q13404 147 aa3.51□□□□□ -1.85
NUP98-208ENST00000461047 MOBPQ13875 183 aa3.51□□□□□ -1.85
NUP98-208ENST00000461047 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
NUP98-208ENST00000461047 SPCS1Q9Y6A9 102 aa3.51□□□□□ -1.85
NUP98-208ENST00000461047 C9JAW5 83 aa3.5□□□□□ -1.85
NUP98-208ENST00000461047 JMJD7-PLA2G4BH0Y9G9 81 aa3.5□□□□□ -1.85
NUP98-208ENST00000461047 SPINK1P00995 79 aa3.5□□□□□ -1.85
NUP98-208ENST00000461047 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
NUP98-208ENST00000461047 LINC00304Q8N9R0 145 aa3.5□□□□□ -1.85
NUP98-208ENST00000461047 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 A0A087X002 238 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 H3BMG7 143 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
NUP98-208ENST00000461047 CD164Q04900 197 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 C3orf22Q8N5N4 141 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 ANKRD29Q8N6D5 301 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 DSCR8Q96T75 97 aa3.49□□□□□ -1.85
NUP98-208ENST00000461047 H3BT86 120 aa3.48□□□□□ -1.85
NUP98-208ENST00000461047 K7EP34 96 aa3.48□□□□□ -1.85
NUP98-208ENST00000461047 PDE6GP18545 87 aa3.48□□□□□ -1.85
NUP98-208ENST00000461047 RBM3P98179 157 aaKnown RBP3.48□□□□□ -1.85
NUP98-208ENST00000461047 SMIM29Q86T20 159 aa3.48□□□□□ -1.85
NUP98-208ENST00000461047 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
NUP98-208ENST00000461047 DYNC1H1Q14204 4646 aaKnown RBP3.48□□□□□ -1.85
NUP98-208ENST00000461047 IGLV8-61A0A075B6I0 122 aa3.47□□□□□ -1.85
NUP98-208ENST00000461047 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
NUP98-208ENST00000461047 SRRM2Q9UQ35 2752 aaKnown RBP3.46□□□□□ -1.85
NUP98-208ENST00000461047 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.85
NUP98-208ENST00000461047 F8W1H4 67 aa3.46□□□□□ -1.86
NUP98-208ENST00000461047 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
NUP98-208ENST00000461047 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
NUP98-208ENST00000461047 EPPK1P58107 5090 aaKnown RBP3.45□□□□□ -1.86
NUP98-208ENST00000461047 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
NUP98-208ENST00000461047 SS18L2Q9UHA2 77 aa3.45□□□□□ -1.86
NUP98-208ENST00000461047 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
NUP98-208ENST00000461047 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
NUP98-208ENST00000461047 A0A1B0GW54 56 aa3.44□□□□□ -1.86
NUP98-208ENST00000461047 IGFL1Q6UW32 110 aa3.44□□□□□ -1.86
NUP98-208ENST00000461047 HRCT1Q6UXD1 115 aa3.44□□□□□ -1.86
NUP98-208ENST00000461047 DNAH8Q96JB1 4490 aa3.43□□□□□ -1.86
NUP98-208ENST00000461047 TRBV7-4A0A0J9YYF1 115 aa3.43□□□□□ -1.86
NUP98-208ENST00000461047 A0A1B0GV72 72 aa3.43□□□□□ -1.86
NUP98-208ENST00000461047 CCKP06307 115 aa3.43□□□□□ -1.86
NUP98-208ENST00000461047 Q6Q795 121 aa3.43□□□□□ -1.86
NUP98-208ENST00000461047 VPS25Q9BRG1 176 aa3.43□□□□□ -1.86
NUP98-208ENST00000461047 KIAA1109Q2LD37 5005 aa3.42□□□□□ -1.86
NUP98-208ENST00000461047 LOC110117498A0A087WWA1 95 aa3.42□□□□□ -1.86
NUP98-208ENST00000461047 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
NUP98-208ENST00000461047 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
NUP98-208ENST00000461047 Q5XG85 94 aa3.42□□□□□ -1.86
NUP98-208ENST00000461047 FLG2Q5D862 2391 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms