RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
SCAMP4-206ENST00000460767 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
SCAMP4-206ENST00000460767 CD164Q04900 197 aa7.62□□□□□ -1.19
SCAMP4-206ENST00000460767 Q1RN00 199 aa7.62□□□□□ -1.19
SCAMP4-206ENST00000460767 hADV29S1A0JD25 119 aa7.61□□□□□ -1.19
SCAMP4-206ENST00000460767 Q6ZQY7 126 aa7.61□□□□□ -1.19
SCAMP4-206ENST00000460767 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
SCAMP4-206ENST00000460767 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
SCAMP4-206ENST00000460767 SLC25A20O43772 301 aa7.6□□□□□ -1.19
SCAMP4-206ENST00000460767 HSD52Q0P140 79 aa7.6□□□□□ -1.19
SCAMP4-206ENST00000460767 Q5XG85 94 aa7.6□□□□□ -1.19
SCAMP4-206ENST00000460767 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.6□□□□□ -1.19
SCAMP4-206ENST00000460767 LCE2CQ5TA81 110 aa7.59□□□□□ -1.19
SCAMP4-206ENST00000460767 RAB37Q96AX2 223 aa7.59□□□□□ -1.19
SCAMP4-206ENST00000460767 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
SCAMP4-206ENST00000460767 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
SCAMP4-206ENST00000460767 PRO1854Q9UHT4 67 aa7.59□□□□□ -1.19
SCAMP4-206ENST00000460767 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
SCAMP4-206ENST00000460767 A6NJY4 79 aa7.58□□□□□ -1.2
SCAMP4-206ENST00000460767 PPDPFLQ8WWR9 84 aa7.58□□□□□ -1.2
SCAMP4-206ENST00000460767 PRO1933Q9H354 126 aa7.58□□□□□ -1.2
SCAMP4-206ENST00000460767 H0YGX0 51 aa7.57□□□□□ -1.2
SCAMP4-206ENST00000460767 H7C2G1 150 aa7.56□□□□□ -1.2
SCAMP4-206ENST00000460767 A0A0G2JQZ4 141 aa7.54□□□□□ -1.2
SCAMP4-206ENST00000460767 A0A1B0GX51 115 aa7.54□□□□□ -1.2
SCAMP4-206ENST00000460767 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
SCAMP4-206ENST00000460767 TRIAP1O43715 76 aa7.53□□□□□ -1.2
SCAMP4-206ENST00000460767 SMIM6P0DI80 62 aa7.53□□□□□ -1.2
SCAMP4-206ENST00000460767 LIMD2Q9BT23 127 aa7.53□□□□□ -1.2
SCAMP4-206ENST00000460767 K7ERJ3 54 aa7.52□□□□□ -1.21
SCAMP4-206ENST00000460767 MT1HP80294 61 aa7.52□□□□□ -1.21
SCAMP4-206ENST00000460767 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
SCAMP4-206ENST00000460767 XP32Q5T750 250 aa7.51□□□□□ -1.21
SCAMP4-206ENST00000460767 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
SCAMP4-206ENST00000460767 Q6JHZ5 121 aa7.5□□□□□ -1.21
SCAMP4-206ENST00000460767 IGFL1Q6UW32 110 aa7.5□□□□□ -1.21
SCAMP4-206ENST00000460767 HRCT1Q6UXD1 115 aa7.5□□□□□ -1.21
SCAMP4-206ENST00000460767 CLEC2BQ92478 149 aa7.49□□□□□ -1.21
SCAMP4-206ENST00000460767 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
SCAMP4-206ENST00000460767 C1orf195Q5TG92 126 aa7.48□□□□□ -1.21
SCAMP4-206ENST00000460767 F8WEM9 126 aa7.47□□□□□ -1.21
SCAMP4-206ENST00000460767 TRBV7-7A0A0K0K1E9 115 aa7.45□□□□□ -1.22
SCAMP4-206ENST00000460767 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
SCAMP4-206ENST00000460767 Q6Q795 121 aa7.45□□□□□ -1.22
SCAMP4-206ENST00000460767 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
SCAMP4-206ENST00000460767 H3BUT2 72 aa7.43□□□□□ -1.22
SCAMP4-206ENST00000460767 SNCGO76070 127 aa7.43□□□□□ -1.22
SCAMP4-206ENST00000460767 NDUFV3P56181 108 aaKnown RBP7.43□□□□□ -1.22
SCAMP4-206ENST00000460767 SNHG12Q9BXW3 62 aa7.43□□□□□ -1.22
SCAMP4-206ENST00000460767 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
SCAMP4-206ENST00000460767 LST1O00453 97 aa7.4□□□□□ -1.22
SCAMP4-206ENST00000460767 GHRHP01286 108 aa7.4□□□□□ -1.22
SCAMP4-206ENST00000460767 TRACP01848 142 aa7.4□□□□□ -1.22
SCAMP4-206ENST00000460767 TCL1BO95988 128 aa7.39□□□□□ -1.23
SCAMP4-206ENST00000460767 COX6CP09669 75 aa7.39□□□□□ -1.23
SCAMP4-206ENST00000460767 H3BQ85 93 aa7.38□□□□□ -1.23
SCAMP4-206ENST00000460767 M0R143 59 aa7.38□□□□□ -1.23
SCAMP4-206ENST00000460767 PSMB2P49721 201 aa7.38□□□□□ -1.23
SCAMP4-206ENST00000460767 H3BMG7 143 aa7.37□□□□□ -1.23
SCAMP4-206ENST00000460767 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
SCAMP4-206ENST00000460767 ORMDL1Q9P0S3 153 aa7.37□□□□□ -1.23
SCAMP4-206ENST00000460767 A0A1W2PNM2 257 aa7.35□□□□□ -1.23
SCAMP4-206ENST00000460767 TMEM256-PLSCR3K7ERE1 68 aa7.35□□□□□ -1.23
SCAMP4-206ENST00000460767 UBE2V1Q13404 147 aa7.35□□□□□ -1.23
SCAMP4-206ENST00000460767 TSTD3H0UI37 97 aa7.34□□□□□ -1.23
SCAMP4-206ENST00000460767 DNAL4O96015 105 aa7.34□□□□□ -1.23
SCAMP4-206ENST00000460767 FABP2P12104 132 aa7.34□□□□□ -1.23
SCAMP4-206ENST00000460767 Q96NJ1 140 aa7.33□□□□□ -1.24
SCAMP4-206ENST00000460767 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
SCAMP4-206ENST00000460767 TRBV7-4A0A0J9YYF1 115 aa7.3□□□□□ -1.24
SCAMP4-206ENST00000460767 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
SCAMP4-206ENST00000460767 SS18L2Q9UHA2 77 aa7.3□□□□□ -1.24
SCAMP4-206ENST00000460767 A0A087WSZ3 146 aa7.29□□□□□ -1.24
SCAMP4-206ENST00000460767 SCGB1C2P0DMR2 95 aa7.29□□□□□ -1.24
SCAMP4-206ENST00000460767 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
SCAMP4-206ENST00000460767 NAA38Q9BRA0 125 aaKnown RBP7.27□□□□□ -1.25
SCAMP4-206ENST00000460767 M0R2T5 61 aa7.26□□□□□ -1.25
SCAMP4-206ENST00000460767 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
SCAMP4-206ENST00000460767 BAALC-AS2P0C853 105 aa7.25□□□□□ -1.25
SCAMP4-206ENST00000460767 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
SCAMP4-206ENST00000460767 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
SCAMP4-206ENST00000460767 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
SCAMP4-206ENST00000460767 CCKP06307 115 aa7.22□□□□□ -1.25
SCAMP4-206ENST00000460767 RBM3P98179 157 aaKnown RBP7.22□□□□□ -1.25
SCAMP4-206ENST00000460767 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
SCAMP4-206ENST00000460767 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
SCAMP4-206ENST00000460767 A0A1B0GV72 72 aa7.21□□□□□ -1.26
SCAMP4-206ENST00000460767 C9orf118A6NHY6 69 aa7.21□□□□□ -1.26
SCAMP4-206ENST00000460767 OBSCN-AS1Q96MR7 158 aa7.21□□□□□ -1.26
SCAMP4-206ENST00000460767 Q75L30 129 aa7.2□□□□□ -1.26
SCAMP4-206ENST00000460767 LYRM7Q5U5X0 104 aa7.19□□□□□ -1.26
SCAMP4-206ENST00000460767 BATFQ16520 125 aa7.18□□□□□ -1.26
SCAMP4-206ENST00000460767 C20orf166-AS1Q96NR2 134 aa7.18□□□□□ -1.26
SCAMP4-206ENST00000460767 LOC110117498A0A087WWA1 95 aa7.17□□□□□ -1.26
SCAMP4-206ENST00000460767 A0A1W2PPM0 123 aa7.17□□□□□ -1.26
SCAMP4-206ENST00000460767 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
SCAMP4-206ENST00000460767 Q6ZQT0 140 aa7.17□□□□□ -1.26
SCAMP4-206ENST00000460767 DSCR8Q96T75 97 aa7.17□□□□□ -1.26
SCAMP4-206ENST00000460767 A8MUU9 505 aa7.16□□□□□ -1.26
SCAMP4-206ENST00000460767 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms