RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 UBE2V1Q13404 147 aa7.35□□□□□ -1.23
HDAC4-206ENST00000460235 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
HDAC4-206ENST00000460235 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
HDAC4-206ENST00000460235 VPS13BQ7Z7G8 4022 aa7.34□□□□□ -1.23
HDAC4-206ENST00000460235 J3QL48 77 aa7.34□□□□□ -1.23
HDAC4-206ENST00000460235 Q6JHZ5 121 aa7.34□□□□□ -1.23
HDAC4-206ENST00000460235 Q8NBF4 154 aa7.34□□□□□ -1.23
HDAC4-206ENST00000460235 IGLV9-49A0A0B4J1Y8 123 aa7.33□□□□□ -1.24
HDAC4-206ENST00000460235 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
HDAC4-206ENST00000460235 LINC01547P58512 204 aaPredicted RBP7.33□□□□□ -1.24
HDAC4-206ENST00000460235 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
HDAC4-206ENST00000460235 PRR26Q8N8Z3 221 aa7.33□□□□□ -1.24
HDAC4-206ENST00000460235 C9JAW5 83 aa7.32□□□□□ -1.24
HDAC4-206ENST00000460235 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
HDAC4-206ENST00000460235 H3BT86 120 aa7.31□□□□□ -1.24
HDAC4-206ENST00000460235 K7EP34 96 aa7.31□□□□□ -1.24
HDAC4-206ENST00000460235 MOBPQ13875 183 aa7.31□□□□□ -1.24
HDAC4-206ENST00000460235 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
HDAC4-206ENST00000460235 FAT1Q14517 4588 aa7.31□□□□□ -1.24
HDAC4-206ENST00000460235 A0A087X002 238 aa7.3□□□□□ -1.24
HDAC4-206ENST00000460235 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
HDAC4-206ENST00000460235 H3BMG7 143 aa7.3□□□□□ -1.24
HDAC4-206ENST00000460235 ANKRD29Q8N6D5 301 aa7.3□□□□□ -1.24
HDAC4-206ENST00000460235 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
HDAC4-206ENST00000460235 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
HDAC4-206ENST00000460235 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
HDAC4-206ENST00000460235 IGLV8-61A0A075B6I0 122 aa7.28□□□□□ -1.24
HDAC4-206ENST00000460235 PDE6GP18545 87 aa7.27□□□□□ -1.25
HDAC4-206ENST00000460235 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.25
HDAC4-206ENST00000460235 CD164Q04900 197 aa7.27□□□□□ -1.25
HDAC4-206ENST00000460235 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
HDAC4-206ENST00000460235 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.25
HDAC4-206ENST00000460235 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
HDAC4-206ENST00000460235 DSCR8Q96T75 97 aa7.27□□□□□ -1.25
HDAC4-206ENST00000460235 SPINK1P00995 79 aa7.26□□□□□ -1.25
HDAC4-206ENST00000460235 F8W1H4 67 aa7.25□□□□□ -1.25
HDAC4-206ENST00000460235 HERC2O95714 4834 aa7.23□□□□□ -1.25
HDAC4-206ENST00000460235 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
HDAC4-206ENST00000460235 LIMD2Q9BT23 127 aa7.23□□□□□ -1.25
HDAC4-206ENST00000460235 MT1HL1P0DM35 61 aa7.21□□□□□ -1.26
HDAC4-206ENST00000460235 TEN1Q86WV5 123 aa7.21□□□□□ -1.26
HDAC4-206ENST00000460235 IGFL1Q6UW32 110 aa7.2□□□□□ -1.26
HDAC4-206ENST00000460235 A0A1B0GW54 56 aa7.19□□□□□ -1.26
HDAC4-206ENST00000460235 Q6Q795 121 aa7.19□□□□□ -1.26
HDAC4-206ENST00000460235 SS18L2Q9UHA2 77 aa7.19□□□□□ -1.26
HDAC4-206ENST00000460235 LOC110117498A0A087WWA1 95 aa7.17□□□□□ -1.26
HDAC4-206ENST00000460235 TRBV7-4A0A0J9YYF1 115 aa7.17□□□□□ -1.26
HDAC4-206ENST00000460235 CCKP06307 115 aa7.17□□□□□ -1.26
HDAC4-206ENST00000460235 MTURNQ8N3F0 131 aa7.17□□□□□ -1.26
HDAC4-206ENST00000460235 A0A1B0GV72 72 aa7.16□□□□□ -1.26
HDAC4-206ENST00000460235 A0A1B0GV90 55 aa7.16□□□□□ -1.26
HDAC4-206ENST00000460235 OBSCN-AS1Q96MR7 158 aa7.16□□□□□ -1.26
HDAC4-206ENST00000460235 PKHD1L1Q86WI1 4243 aa7.15□□□□□ -1.26
HDAC4-206ENST00000460235 TRBV7-7A0A0K0K1E9 115 aa7.15□□□□□ -1.26
HDAC4-206ENST00000460235 Q5XG85 94 aa7.15□□□□□ -1.26
HDAC4-206ENST00000460235 HRCT1Q6UXD1 115 aa7.15□□□□□ -1.26
HDAC4-206ENST00000460235 PRO0461Q9UI25 63 aa7.15□□□□□ -1.26
HDAC4-206ENST00000460235 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
HDAC4-206ENST00000460235 DMBT1Q9UGM3 2413 aaPredicted RBP7.14□□□□□ -1.27
HDAC4-206ENST00000460235 C14orf132Q9NPU4 83 aa7.13□□□□□ -1.27
HDAC4-206ENST00000460235 SMCPP49901 116 aaPredicted RBP7.12□□□□□ -1.27
HDAC4-206ENST00000460235 Q6ZQT0 140 aa7.11□□□□□ -1.27
HDAC4-206ENST00000460235 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
HDAC4-206ENST00000460235 A0A087WSZ3 146 aa7.09□□□□□ -1.27
HDAC4-206ENST00000460235 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
HDAC4-206ENST00000460235 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
HDAC4-206ENST00000460235 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
HDAC4-206ENST00000460235 FP248Q71RG6 208 aaPredicted RBP7.08□□□□□ -1.28
HDAC4-206ENST00000460235 J3QR89 54 aa7.05□□□□□ -1.28
HDAC4-206ENST00000460235 J3KT08 172 aa7.03□□□□□ -1.28
HDAC4-206ENST00000460235 ACYP1P07311 99 aa7.03□□□□□ -1.28
HDAC4-206ENST00000460235 PRR4Q16378 134 aa7.03□□□□□ -1.28
HDAC4-206ENST00000460235 NREPQ16612 68 aa7.03□□□□□ -1.28
HDAC4-206ENST00000460235 MYCBP2O75592 4640 aa7.02□□□□□ -1.28
HDAC4-206ENST00000460235 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
HDAC4-206ENST00000460235 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
HDAC4-206ENST00000460235 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
HDAC4-206ENST00000460235 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
HDAC4-206ENST00000460235 C1orf195Q5TG92 126 aa7□□□□□ -1.29
HDAC4-206ENST00000460235 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
HDAC4-206ENST00000460235 FAM240AA0A1B0GVK7 77 aa6.98□□□□□ -1.29
HDAC4-206ENST00000460235 NDUFB1O75438 58 aa6.98□□□□□ -1.29
HDAC4-206ENST00000460235 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
HDAC4-206ENST00000460235 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
HDAC4-206ENST00000460235 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
HDAC4-206ENST00000460235 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.3
HDAC4-206ENST00000460235 TNXBP22105 4242 aa6.96□□□□□ -1.3
HDAC4-206ENST00000460235 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
HDAC4-206ENST00000460235 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
HDAC4-206ENST00000460235 BPY2O14599 106 aa6.92□□□□□ -1.3
HDAC4-206ENST00000460235 Q6ZVQ6 151 aa6.92□□□□□ -1.3
HDAC4-206ENST00000460235 K7ERU9 68 aa6.91□□□□□ -1.3
HDAC4-206ENST00000460235 Q96NJ1 140 aa6.91□□□□□ -1.3
HDAC4-206ENST00000460235 LINC00846Q9NV44 126 aa6.91□□□□□ -1.3
HDAC4-206ENST00000460235 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
HDAC4-206ENST00000460235 A8MWP4 228 aa6.88□□□□□ -1.31
HDAC4-206ENST00000460235 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
HDAC4-206ENST00000460235 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
HDAC4-206ENST00000460235 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
HDAC4-206ENST00000460235 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms