RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 HIGD1BQ9P298 99 aa13□□□□□ -0.33
HOXB3-202ENST00000460160 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
HOXB3-202ENST00000460160 F8WEM9 126 aa12.98□□□□□ -0.33
HOXB3-202ENST00000460160 CFC1BP0CG36 223 aa12.98□□□□□ -0.33
HOXB3-202ENST00000460160 CFC1P0CG37 223 aa12.98□□□□□ -0.33
HOXB3-202ENST00000460160 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
HOXB3-202ENST00000460160 C2orf91Q6ZV80 131 aa12.97□□□□□ -0.33
HOXB3-202ENST00000460160 C1orf195Q5TG92 126 aa12.96□□□□□ -0.33
HOXB3-202ENST00000460160 C9orf92A6NGG3 77 aa12.94□□□□□ -0.34
HOXB3-202ENST00000460160 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.94□□□□□ -0.34
HOXB3-202ENST00000460160 IGLV8-61A0A075B6I0 122 aa12.92□□□□□ -0.34
HOXB3-202ENST00000460160 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
HOXB3-202ENST00000460160 A0A0B4J2C4 111 aa12.91□□□□□ -0.34
HOXB3-202ENST00000460160 Q6JHZ5 121 aa12.9□□□□□ -0.34
HOXB3-202ENST00000460160 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
HOXB3-202ENST00000460160 OCIAD2Q56VL3 154 aa12.88□□□□□ -0.35
HOXB3-202ENST00000460160 IGFL1Q6UW32 110 aa12.88□□□□□ -0.35
HOXB3-202ENST00000460160 CLEC2BQ92478 149 aa12.88□□□□□ -0.35
HOXB3-202ENST00000460160 TCL1BO95988 128 aa12.87□□□□□ -0.35
HOXB3-202ENST00000460160 CEND1Q8N111 149 aa12.87□□□□□ -0.35
HOXB3-202ENST00000460160 SNHG12Q9BXW3 62 aa12.83□□□□□ -0.35
HOXB3-202ENST00000460160 LOC105371267A0A1B0GV96 52 aa12.83□□□□□ -0.36
HOXB3-202ENST00000460160 H0YGX0 51 aa12.83□□□□□ -0.36
HOXB3-202ENST00000460160 FAM218AQ96MZ4 157 aa12.83□□□□□ -0.36
HOXB3-202ENST00000460160 TRBV7-7A0A0K0K1E9 115 aa12.82□□□□□ -0.36
HOXB3-202ENST00000460160 FXYD2P54710 66 aa12.81□□□□□ -0.36
HOXB3-202ENST00000460160 PCOTHQ58A44 107 aa12.81□□□□□ -0.36
HOXB3-202ENST00000460160 TMEM238LA0A1B0GVL6 79 aa12.79□□□□□ -0.36
HOXB3-202ENST00000460160 A6NJY4 79 aa12.79□□□□□ -0.36
HOXB3-202ENST00000460160 H3BUT2 72 aa12.79□□□□□ -0.36
HOXB3-202ENST00000460160 PRO1854Q9UHT4 67 aa12.79□□□□□ -0.36
HOXB3-202ENST00000460160 SNCGO76070 127 aa12.78□□□□□ -0.36
HOXB3-202ENST00000460160 TRIAP1O43715 76 aa12.72□□□□□ -0.37
HOXB3-202ENST00000460160 A0A1B0GX51 115 aa12.71□□□□□ -0.38
HOXB3-202ENST00000460160 HSD52Q0P140 79 aa12.71□□□□□ -0.38
HOXB3-202ENST00000460160 SMIM6P0DI80 62 aa12.7□□□□□ -0.38
HOXB3-202ENST00000460160 NDUFV3P56181 108 aaKnown RBP12.7□□□□□ -0.38
HOXB3-202ENST00000460160 RPL37P61927 97 aaKnown RBP12.69□□□□□ -0.38
HOXB3-202ENST00000460160 K7ERJ3 54 aa12.66□□□□□ -0.38
HOXB3-202ENST00000460160 LCE2CQ5TA81 110 aa12.66□□□□□ -0.38
HOXB3-202ENST00000460160 Q6Q795 121 aa12.66□□□□□ -0.38
HOXB3-202ENST00000460160 UQCR10Q9UDW1 63 aa12.66□□□□□ -0.38
HOXB3-202ENST00000460160 KRTAP19-2Q3LHN2 52 aa12.65□□□□□ -0.38
HOXB3-202ENST00000460160 KRTAP9-2Q9BYQ4 174 aa12.65□□□□□ -0.38
HOXB3-202ENST00000460160 TEN1Q86WV5 123 aa12.63□□□□□ -0.39
HOXB3-202ENST00000460160 H3BMG7 143 aa12.62□□□□□ -0.39
HOXB3-202ENST00000460160 LST1O00453 97 aa12.62□□□□□ -0.39
HOXB3-202ENST00000460160 GHRHP01286 108 aa12.62□□□□□ -0.39
HOXB3-202ENST00000460160 FABP2P12104 132 aa12.62□□□□□ -0.39
HOXB3-202ENST00000460160 SS18L2Q9UHA2 77 aa12.6□□□□□ -0.39
HOXB3-202ENST00000460160 PSMB2P49721 201 aa12.58□□□□□ -0.4
HOXB3-202ENST00000460160 OBSCN-AS1Q96MR7 158 aa12.57□□□□□ -0.4
HOXB3-202ENST00000460160 A0A087WSZ3 146 aa12.56□□□□□ -0.4
HOXB3-202ENST00000460160 DNAL4O96015 105 aa12.55□□□□□ -0.4
HOXB3-202ENST00000460160 ORMDL1Q9P0S3 153 aa12.54□□□□□ -0.4
HOXB3-202ENST00000460160 COX6CP09669 75 aa12.53□□□□□ -0.4
HOXB3-202ENST00000460160 A0A1W2PNM2 257 aa12.52□□□□□ -0.4
HOXB3-202ENST00000460160 Q75L30 129 aa12.5□□□□□ -0.41
HOXB3-202ENST00000460160 Q96NJ1 140 aa12.5□□□□□ -0.41
HOXB3-202ENST00000460160 H3BQ85 93 aa12.49□□□□□ -0.41
HOXB3-202ENST00000460160 MT1HP80294 61 aa12.48□□□□□ -0.41
HOXB3-202ENST00000460160 A0A1B0GV72 72 aa12.47□□□□□ -0.41
HOXB3-202ENST00000460160 TMEM256-PLSCR3K7ERE1 68 aa12.46□□□□□ -0.42
HOXB3-202ENST00000460160 ANKRD29Q8N6D5 301 aa12.46□□□□□ -0.42
HOXB3-202ENST00000460160 TRBV7-4A0A0J9YYF1 115 aa12.42□□□□□ -0.42
HOXB3-202ENST00000460160 TSTD3H0UI37 97 aa12.42□□□□□ -0.42
HOXB3-202ENST00000460160 ATP11AUNQ6ZP68 121 aa12.42□□□□□ -0.42
HOXB3-202ENST00000460160 TRACP01848 142 aa12.42□□□□□ -0.42
HOXB3-202ENST00000460160 UBE2V1Q13404 147 aa12.4□□□□□ -0.42
HOXB3-202ENST00000460160 SCGB1C2P0DMR2 95 aa12.39□□□□□ -0.43
HOXB3-202ENST00000460160 FLGP20930 4061 aaPredicted RBP12.39□□□□□ -0.43
HOXB3-202ENST00000460160 C20orf166-AS1Q96NR2 134 aa12.38□□□□□ -0.43
HOXB3-202ENST00000460160 SIGMAR1Q99720 223 aa12.37□□□□□ -0.43
HOXB3-202ENST00000460160 A8MUU9 505 aa12.36□□□□□ -0.43
HOXB3-202ENST00000460160 CCKP06307 115 aa12.36□□□□□ -0.43
HOXB3-202ENST00000460160 DSCR10P59022 87 aa12.34□□□□□ -0.43
HOXB3-202ENST00000460160 COX6B2Q6YFQ2 88 aa12.34□□□□□ -0.43
HOXB3-202ENST00000460160 M0R143 59 aa12.32□□□□□ -0.44
HOXB3-202ENST00000460160 IGKV4-1P06312 121 aa12.32□□□□□ -0.44
HOXB3-202ENST00000460160 LINC00472Q9H8W2 130 aa12.3□□□□□ -0.44
HOXB3-202ENST00000460160 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
HOXB3-202ENST00000460160 RBM3P98179 157 aaKnown RBP12.28□□□□□ -0.44
HOXB3-202ENST00000460160 BAALC-AS2P0C853 105 aa12.27□□□□□ -0.45
HOXB3-202ENST00000460160 DEFB116Q30KQ4 102 aa12.27□□□□□ -0.45
HOXB3-202ENST00000460160 LINC00313P59037 77 aa12.26□□□□□ -0.45
HOXB3-202ENST00000460160 VPS25Q9BRG1 176 aa12.25□□□□□ -0.45
HOXB3-202ENST00000460160 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
HOXB3-202ENST00000460160 NAA38Q9BRA0 125 aaKnown RBP12.24□□□□□ -0.45
HOXB3-202ENST00000460160 KRTAP16-1A8MUX0 517 aa12.23□□□□□ -0.45
HOXB3-202ENST00000460160 LORP23490 312 aaPredicted RBP12.23□□□□□ -0.45
HOXB3-202ENST00000460160 KRTAP10-6P60371 365 aaPredicted RBP12.23□□□□□ -0.45
HOXB3-202ENST00000460160 NOTCH2NLQ7Z3S9 236 aa12.22□□□□□ -0.45
HOXB3-202ENST00000460160 M0R2T5 61 aa12.21□□□□□ -0.45
HOXB3-202ENST00000460160 BATFQ16520 125 aa12.21□□□□□ -0.46
HOXB3-202ENST00000460160 KRTAP9-6A0A140TA67 174 aa12.2□□□□□ -0.46
HOXB3-202ENST00000460160 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
HOXB3-202ENST00000460160 C9JAW5 83 aa12.17□□□□□ -0.46
HOXB3-202ENST00000460160 IGHV6-1A0A0B4J1U7 121 aa12.16□□□□□ -0.46
HOXB3-202ENST00000460160 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
HOXB3-202ENST00000460160 C21orf62-AS1Q17RA5 79 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms