RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IGFL1Q6UW32 110 aa5.58□□□□□ -1.52
HDAC3-202ENST00000459727 BIRC6Q9NR09 4857 aa5.57□□□□□ -1.52
HDAC3-202ENST00000459727 PRB2P02812 416 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-202ENST00000459727 DSCR10P59022 87 aa5.57□□□□□ -1.52
HDAC3-202ENST00000459727 RPL37AP61513 92 aaKnown RBP5.57□□□□□ -1.52
HDAC3-202ENST00000459727 C4orf48Q5BLP8 95 aa5.57□□□□□ -1.52
HDAC3-202ENST00000459727 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
HDAC3-202ENST00000459727 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
HDAC3-202ENST00000459727 DYNC2H1Q8NCM8 4307 aaKnown RBP5.57□□□□□ -1.52
HDAC3-202ENST00000459727 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-202ENST00000459727 NBDYA0A0U1RRE5 68 aa5.56□□□□□ -1.52
HDAC3-202ENST00000459727 A0A1W2PNN7 141 aa5.56□□□□□ -1.52
HDAC3-202ENST00000459727 H3BPC8 53 aa5.56□□□□□ -1.52
HDAC3-202ENST00000459727 PRLHP81277 87 aa5.56□□□□□ -1.52
HDAC3-202ENST00000459727 KRTAP1-5Q9BYS1 174 aa5.56□□□□□ -1.52
HDAC3-202ENST00000459727 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-202ENST00000459727 K7EQZ3 153 aa5.54□□□□□ -1.52
HDAC3-202ENST00000459727 OXTP01178 125 aa5.54□□□□□ -1.52
HDAC3-202ENST00000459727 A0A087WSZ3 146 aa5.53□□□□□ -1.52
HDAC3-202ENST00000459727 MP68P56378 58 aa5.53□□□□□ -1.52
HDAC3-202ENST00000459727 Q5XG85 94 aa5.53□□□□□ -1.52
HDAC3-202ENST00000459727 SACSQ9NZJ4 4579 aa5.53□□□□□ -1.52
HDAC3-202ENST00000459727 LRCOL1A6NCL2 159 aa5.52□□□□□ -1.53
HDAC3-202ENST00000459727 FAM30AQ9NZY2 134 aa5.52□□□□□ -1.53
HDAC3-202ENST00000459727 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
HDAC3-202ENST00000459727 A8MWP4 228 aa5.51□□□□□ -1.53
HDAC3-202ENST00000459727 PHF5AQ7RTV0 110 aaKnown RBP5.51□□□□□ -1.53
HDAC3-202ENST00000459727 ZCCHC13Q8WW36 166 aaKnown RBP5.51□□□□□ -1.53
HDAC3-202ENST00000459727 TENM3Q9P273 2699 aa5.5□□□□□ -1.53
HDAC3-202ENST00000459727 PRR15Q8IV56 129 aa5.5□□□□□ -1.53
HDAC3-202ENST00000459727 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
HDAC3-202ENST00000459727 hDV103S1A0JD37 113 aa5.49□□□□□ -1.53
HDAC3-202ENST00000459727 Q6ZRN7 208 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-202ENST00000459727 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
HDAC3-202ENST00000459727 SPACA4Q8TDM5 124 aa5.49□□□□□ -1.53
HDAC3-202ENST00000459727 RYR2Q92736 4967 aa5.49□□□□□ -1.53
HDAC3-202ENST00000459727 CHTF8P0CG12 524 aa5.48□□□□□ -1.53
HDAC3-202ENST00000459727 CASC2Q6XLA1 102 aa5.48□□□□□ -1.53
HDAC3-202ENST00000459727 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
HDAC3-202ENST00000459727 LINC00483Q53H64 154 aa5.47□□□□□ -1.53
HDAC3-202ENST00000459727 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
HDAC3-202ENST00000459727 KRTAP29-1A8MX34 341 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-202ENST00000459727 MOBPQ13875 183 aa5.46□□□□□ -1.54
HDAC3-202ENST00000459727 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
HDAC3-202ENST00000459727 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
HDAC3-202ENST00000459727 SPANXA2-OT1Q8N9U9 137 aa5.46□□□□□ -1.54
HDAC3-202ENST00000459727 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
HDAC3-202ENST00000459727 DNAH7Q8WXX0 4024 aa5.45□□□□□ -1.54
HDAC3-202ENST00000459727 LYSTQ99698 3801 aa5.45□□□□□ -1.54
HDAC3-202ENST00000459727 A0A087WTM6 91 aa5.44□□□□□ -1.54
HDAC3-202ENST00000459727 WFDC13Q8IUB5 93 aa5.44□□□□□ -1.54
HDAC3-202ENST00000459727 V9GYY9 64 aa5.44□□□□□ -1.54
HDAC3-202ENST00000459727 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
HDAC3-202ENST00000459727 TRAV22A0A0B4J277 110 aa5.43□□□□□ -1.54
HDAC3-202ENST00000459727 FP248Q71RG6 208 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-202ENST00000459727 H0Y9P7 68 aa5.42□□□□□ -1.54
HDAC3-202ENST00000459727 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
HDAC3-202ENST00000459727 KRTAP11-1Q8IUC1 163 aa5.42□□□□□ -1.54
HDAC3-202ENST00000459727 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
HDAC3-202ENST00000459727 RYR1P21817 5038 aa5.41□□□□□ -1.54
HDAC3-202ENST00000459727 RTL8CO15255 209 aa5.41□□□□□ -1.54
HDAC3-202ENST00000459727 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
HDAC3-202ENST00000459727 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.54
HDAC3-202ENST00000459727 IGLV5-52A0A0A0MRZ9 124 aa5.4□□□□□ -1.54
HDAC3-202ENST00000459727 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
HDAC3-202ENST00000459727 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
HDAC3-202ENST00000459727 ZNF861PO60384 105 aa5.39□□□□□ -1.55
HDAC3-202ENST00000459727 Q1T7F1 81 aa5.39□□□□□ -1.55
HDAC3-202ENST00000459727 DEFB116Q30KQ4 102 aa5.39□□□□□ -1.55
HDAC3-202ENST00000459727 Q6ZR54 194 aa5.39□□□□□ -1.55
HDAC3-202ENST00000459727 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
HDAC3-202ENST00000459727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-202ENST00000459727 A0A0G2JQZ4 141 aa5.38□□□□□ -1.55
HDAC3-202ENST00000459727 CD164Q04900 197 aa5.38□□□□□ -1.55
HDAC3-202ENST00000459727 ASB16-AS1Q495Z4 193 aa5.38□□□□□ -1.55
HDAC3-202ENST00000459727 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
HDAC3-202ENST00000459727 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
HDAC3-202ENST00000459727 C1orf134Q5TEV5 83 aa5.37□□□□□ -1.55
HDAC3-202ENST00000459727 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
HDAC3-202ENST00000459727 WWC2-AS2Q96NR7 200 aa5.37□□□□□ -1.55
HDAC3-202ENST00000459727 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
HDAC3-202ENST00000459727 PANO1I0J062 215 aa5.36□□□□□ -1.55
HDAC3-202ENST00000459727 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
HDAC3-202ENST00000459727 C8orf17Q9NRJ1 99 aa5.35□□□□□ -1.55
HDAC3-202ENST00000459727 HERC2O95714 4834 aa5.35□□□□□ -1.55
HDAC3-202ENST00000459727 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
HDAC3-202ENST00000459727 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
HDAC3-202ENST00000459727 Q96NJ1 140 aa5.34□□□□□ -1.55
HDAC3-202ENST00000459727 C8orf87E5RJ46 101 aa5.33□□□□□ -1.56
HDAC3-202ENST00000459727 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
HDAC3-202ENST00000459727 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
HDAC3-202ENST00000459727 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
HDAC3-202ENST00000459727 LINC00336Q6ZUF6 198 aa5.32□□□□□ -1.56
HDAC3-202ENST00000459727 MRPL34Q9BQ48 92 aaKnown RBP5.32□□□□□ -1.56
HDAC3-202ENST00000459727 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
HDAC3-202ENST00000459727 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
HDAC3-202ENST00000459727 LIMD2Q9BT23 127 aa5.31□□□□□ -1.56
HDAC3-202ENST00000459727 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
HDAC3-202ENST00000459727 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
HDAC3-202ENST00000459727 LOC101927531A0A1B0GV80 90 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms