RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
VPS50-208ENST00000458707 TRAV22A0A0B4J277 110 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 LCE6AA0A183 80 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 C3orf84H3BNL1 204 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 C7orf33Q8WU49 177 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
VPS50-208ENST00000458707 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 LINC01556Q5JQF7 62 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 SERTAD4-AS1Q5TG53 156 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 NKAPP1Q8N9T2 125 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 DHRS4-AS1Q9P1J3 65 aa5.51□□□□□ -1.53
VPS50-208ENST00000458707 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
VPS50-208ENST00000458707 A8MUN3 132 aa5.5□□□□□ -1.53
VPS50-208ENST00000458707 UBE2AP49459 152 aa5.5□□□□□ -1.53
VPS50-208ENST00000458707 Q6ZRX8 168 aa5.5□□□□□ -1.53
VPS50-208ENST00000458707 IGLV5-37A0A075B6J1 123 aa5.49□□□□□ -1.53
VPS50-208ENST00000458707 A0A1W2PNM2 257 aa5.49□□□□□ -1.53
VPS50-208ENST00000458707 SPRR1AP35321 89 aa5.49□□□□□ -1.53
VPS50-208ENST00000458707 DEFB105AQ8NG35 78 aa5.49□□□□□ -1.53
VPS50-208ENST00000458707 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
VPS50-208ENST00000458707 NSD1Q96L73 2696 aaPredicted RBP5.48□□□□□ -1.53
VPS50-208ENST00000458707 C16orf90A8MZG2 172 aa5.48□□□□□ -1.53
VPS50-208ENST00000458707 Q8NBF4 154 aa5.48□□□□□ -1.53
VPS50-208ENST00000458707 Q9BRP9 147 aa5.48□□□□□ -1.53
VPS50-208ENST00000458707 HIGD2AQ9BW72 106 aa5.48□□□□□ -1.53
VPS50-208ENST00000458707 IGKV2D-24A0A075B6R9 120 aa5.47□□□□□ -1.53
VPS50-208ENST00000458707 SMIM29Q86T20 159 aa5.47□□□□□ -1.53
VPS50-208ENST00000458707 IGLV1-50A0A075B6I6 118 aa5.47□□□□□ -1.53
VPS50-208ENST00000458707 C1orf137Q5JT78 98 aa5.47□□□□□ -1.53
VPS50-208ENST00000458707 Q5VV11 94 aa5.47□□□□□ -1.53
VPS50-208ENST00000458707 CYP4F30PQ9H0H9 118 aa5.47□□□□□ -1.53
VPS50-208ENST00000458707 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
VPS50-208ENST00000458707 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
VPS50-208ENST00000458707 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
VPS50-208ENST00000458707 DSCR10P59022 87 aa5.45□□□□□ -1.54
VPS50-208ENST00000458707 ANK2Q01484 3957 aa5.45□□□□□ -1.54
VPS50-208ENST00000458707 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
VPS50-208ENST00000458707 INAFM1C9JVW0 142 aa5.44□□□□□ -1.54
VPS50-208ENST00000458707 PSPHP1O15172 72 aa5.44□□□□□ -1.54
VPS50-208ENST00000458707 C1orf64Q8NEQ6 169 aa5.44□□□□□ -1.54
VPS50-208ENST00000458707 FAM30AQ9NZY2 134 aa5.44□□□□□ -1.54
VPS50-208ENST00000458707 MEGF8Q7Z7M0 2845 aa5.44□□□□□ -1.54
VPS50-208ENST00000458707 RPL37AP8A6NKH3 93 aa5.43□□□□□ -1.54
VPS50-208ENST00000458707 PSCAO43653 123 aa5.43□□□□□ -1.54
VPS50-208ENST00000458707 KRTAP7-1Q8IUC3 87 aa5.43□□□□□ -1.54
VPS50-208ENST00000458707 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
VPS50-208ENST00000458707 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
VPS50-208ENST00000458707 TRRAPQ9Y4A5 3859 aa5.42□□□□□ -1.54
VPS50-208ENST00000458707 LIMD2Q9BT23 127 aa5.42□□□□□ -1.54
VPS50-208ENST00000458707 DEFB131BA0A096LNP1 70 aa5.41□□□□□ -1.54
VPS50-208ENST00000458707 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
VPS50-208ENST00000458707 K7EQZ3 153 aa5.41□□□□□ -1.54
VPS50-208ENST00000458707 TGP01266 2768 aa5.41□□□□□ -1.54
VPS50-208ENST00000458707 A8MU10 97 aa5.41□□□□□ -1.54
VPS50-208ENST00000458707 KRTAP10-11P60412 298 aa5.41□□□□□ -1.54
VPS50-208ENST00000458707 TENM3Q9P273 2699 aa5.4□□□□□ -1.55
VPS50-208ENST00000458707 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.39□□□□□ -1.55
VPS50-208ENST00000458707 Q75L30 129 aa5.39□□□□□ -1.55
VPS50-208ENST00000458707 RYR3Q15413 4870 aa5.39□□□□□ -1.55
VPS50-208ENST00000458707 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
VPS50-208ENST00000458707 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
VPS50-208ENST00000458707 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
VPS50-208ENST00000458707 IGLV8-61A0A075B6I0 122 aa5.38□□□□□ -1.55
VPS50-208ENST00000458707 A0A087X002 238 aa5.38□□□□□ -1.55
VPS50-208ENST00000458707 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
VPS50-208ENST00000458707 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
VPS50-208ENST00000458707 REG3GQ6UW15 175 aa5.38□□□□□ -1.55
VPS50-208ENST00000458707 LOC101927531A0A1B0GV80 90 aa5.37□□□□□ -1.55
VPS50-208ENST00000458707 LINC00313P59037 77 aa5.37□□□□□ -1.55
VPS50-208ENST00000458707 ASB16-AS1Q495Z4 193 aa5.37□□□□□ -1.55
VPS50-208ENST00000458707 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
VPS50-208ENST00000458707 DNAH1Q9P2D7 4330 aa5.36□□□□□ -1.55
VPS50-208ENST00000458707 BIRC6Q9NR09 4857 aa5.36□□□□□ -1.55
VPS50-208ENST00000458707 CHKB-CPT1BH3BT56 60 aa5.36□□□□□ -1.55
VPS50-208ENST00000458707 NDUFB1O75438 58 aa5.36□□□□□ -1.55
VPS50-208ENST00000458707 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
VPS50-208ENST00000458707 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
VPS50-208ENST00000458707 MP68P56378 58 aa5.34□□□□□ -1.55
VPS50-208ENST00000458707 CMYA5Q8N3K9 4069 aa5.33□□□□□ -1.56
VPS50-208ENST00000458707 LRCOL1A6NCL2 159 aa5.33□□□□□ -1.56
VPS50-208ENST00000458707 KRTAP29-1A8MX34 341 aaPredicted RBP5.33□□□□□ -1.56
VPS50-208ENST00000458707 KRTAP24-1Q3LI83 254 aa5.33□□□□□ -1.56
VPS50-208ENST00000458707 DNAH3Q8TD57 4116 aa5.33□□□□□ -1.56
VPS50-208ENST00000458707 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
VPS50-208ENST00000458707 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
VPS50-208ENST00000458707 MOBPQ13875 183 aa5.32□□□□□ -1.56
VPS50-208ENST00000458707 A0A087WSZ3 146 aa5.31□□□□□ -1.56
VPS50-208ENST00000458707 H3BPC8 53 aa5.31□□□□□ -1.56
VPS50-208ENST00000458707 WFDC13Q8IUB5 93 aa5.3□□□□□ -1.56
VPS50-208ENST00000458707 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
VPS50-208ENST00000458707 A0A096LNI7 61 aa5.3□□□□□ -1.56
VPS50-208ENST00000458707 SPRR1BP22528 89 aa5.3□□□□□ -1.56
VPS50-208ENST00000458707 PRLHP81277 87 aa5.3□□□□□ -1.56
VPS50-208ENST00000458707 DEFB116Q30KQ4 102 aa5.3□□□□□ -1.56
VPS50-208ENST00000458707 H0Y9J4 135 aa5.29□□□□□ -1.56
VPS50-208ENST00000458707 PLA2G1BP04054 148 aaKnown RBP5.29□□□□□ -1.56
VPS50-208ENST00000458707 CNBPP62633 177 aaKnown RBP5.29□□□□□ -1.56
VPS50-208ENST00000458707 RPL37AP61513 92 aaKnown RBP5.28□□□□□ -1.56
VPS50-208ENST00000458707 LINC00208Q96KT6 92 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms