RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 A0A1W2PPV4 95 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 DISC1C4P0D8 188 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 SEC11AP67812 179 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 C4orf26Q17RF5 130 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 Q6JHZ5 121 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 C9orf62Q8N4C0 152 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 SMIM2Q9BVW6 85 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 WDR61Q9GZS3 305 aaKnown RBP0.81□□□□□ -2.28
CDKN3-205ENST00000458126 PRO0628Q9UI54 55 aa0.81□□□□□ -2.28
CDKN3-205ENST00000458126 A0A087WXM4 84 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 ATP5HO75947 161 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 STAG3L2P0CL84 134 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 STAG3L3P0CL85 134 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 ZNF22P17026 224 aaPredicted RBP0.8□□□□□ -2.28
CDKN3-205ENST00000458126 TMEM128Q5BJH2 165 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 SMIM15Q7Z3B0 74 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 LINC00472Q9H8W2 130 aa0.8□□□□□ -2.28
CDKN3-205ENST00000458126 TRBV10-2A0A0K0K1G8 114 aa0.79□□□□□ -2.28
CDKN3-205ENST00000458126 TCAPO15273 167 aa0.79□□□□□ -2.28
CDKN3-205ENST00000458126 SDC2P34741 201 aa0.79□□□□□ -2.28
CDKN3-205ENST00000458126 HINT1P49773 126 aaPredicted RBP0.79□□□□□ -2.28
CDKN3-205ENST00000458126 MRPL51Q4U2R6 128 aaKnown RBP0.79□□□□□ -2.28
CDKN3-205ENST00000458126 STX12Q86Y82 276 aa0.79□□□□□ -2.28
CDKN3-205ENST00000458126 TMEM167BQ9NRX6 74 aa0.79□□□□□ -2.28
CDKN3-205ENST00000458126 SCP2D1Q9UJQ7 156 aa0.79□□□□□ -2.28
CDKN3-205ENST00000458126 M0QZ58 72 aa0.78□□□□□ -2.28
CDKN3-205ENST00000458126 SFT2D2O95562 160 aa0.77□□□□□ -2.29
CDKN3-205ENST00000458126 VBP1P61758 197 aa0.77□□□□□ -2.29
CDKN3-205ENST00000458126 PMVKQ15126 192 aa0.77□□□□□ -2.29
CDKN3-205ENST00000458126 SMIM31A0A1B0GVY4 71 aa0.76□□□□□ -2.29
CDKN3-205ENST00000458126 LINC00158P58513 81 aa0.76□□□□□ -2.29
CDKN3-205ENST00000458126 TRBV24-1A0A075B6N3 115 aa0.75□□□□□ -2.29
CDKN3-205ENST00000458126 A0A1W2PPM0 123 aa0.75□□□□□ -2.29
CDKN3-205ENST00000458126 SPINK8P0C7L1 97 aa0.75□□□□□ -2.29
CDKN3-205ENST00000458126 NXT2Q9NPJ8 142 aaKnown RBP0.75□□□□□ -2.29
CDKN3-205ENST00000458126 TRBV20OR9-2A0A075B6H5 130 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 HSBP1O75506 76 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 PPP1R17O96001 155 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 APOA1P02647 267 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 PTMSP20962 102 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 LYRM7Q5U5X0 104 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 YPEL4Q96NS1 127 aa0.74□□□□□ -2.29
CDKN3-205ENST00000458126 LOC389332A0A1B0GUA5 103 aa0.73□□□□□ -2.29
CDKN3-205ENST00000458126 A6NED7 52 aa0.73□□□□□ -2.29
CDKN3-205ENST00000458126 AKR1C3P42330 323 aa0.73□□□□□ -2.29
CDKN3-205ENST00000458126 S100A7L2Q5SY68 101 aa0.73□□□□□ -2.29
CDKN3-205ENST00000458126 BAGE2Q86Y30 109 aa0.73□□□□□ -2.29
CDKN3-205ENST00000458126 LSM5Q9Y4Y9 91 aaKnown RBP0.73□□□□□ -2.29
CDKN3-205ENST00000458126 C8orf87E5RJ46 101 aa0.72□□□□□ -2.29
CDKN3-205ENST00000458126 AKAIN1P0CW23 69 aa0.72□□□□□ -2.29
CDKN3-205ENST00000458126 SFT2D1Q8WV19 159 aa0.72□□□□□ -2.29
CDKN3-205ENST00000458126 ATP6V1G3Q96LB4 118 aa0.72□□□□□ -2.29
CDKN3-205ENST00000458126 CST9LQ9H4G1 147 aa0.72□□□□□ -2.29
CDKN3-205ENST00000458126 SSBP1Q04837 148 aaKnown RBP0.71□□□□□ -2.3
CDKN3-205ENST00000458126 SFTA2Q6UW10 78 aa0.71□□□□□ -2.3
CDKN3-205ENST00000458126 TCEAL7Q9BRU2 100 aa0.71□□□□□ -2.3
CDKN3-205ENST00000458126 SPANXB1Q9NS25 103 aaPredicted RBP0.71□□□□□ -2.3
CDKN3-205ENST00000458126 S100A9P06702 114 aaKnown RBP0.7□□□□□ -2.3
CDKN3-205ENST00000458126 PVALBP20472 110 aaPredicted RBP0.7□□□□□ -2.3
CDKN3-205ENST00000458126 ELOF1P60002 83 aaKnown RBP0.7□□□□□ -2.3
CDKN3-205ENST00000458126 C20orf78Q9BR46 151 aa0.7□□□□□ -2.3
CDKN3-205ENST00000458126 C9orf16Q9BUW7 83 aa0.7□□□□□ -2.3
CDKN3-205ENST00000458126 TINCRA0A1B0GVN0 87 aa0.69□□□□□ -2.3
CDKN3-205ENST00000458126 C7orf65Q6ZTY9 151 aa0.69□□□□□ -2.3
CDKN3-205ENST00000458126 TRAV13-2A0A0B4J235 113 aa0.68□□□□□ -2.3
CDKN3-205ENST00000458126 FAM240AA0A1B0GVK7 77 aa0.68□□□□□ -2.3
CDKN3-205ENST00000458126 ATP6V1G2O95670 118 aa0.68□□□□□ -2.3
CDKN3-205ENST00000458126 SCGB1C2P0DMR2 95 aa0.68□□□□□ -2.3
CDKN3-205ENST00000458126 STOML3Q8TAV4 291 aa0.68□□□□□ -2.3
CDKN3-205ENST00000458126 SCGB1C1Q8TD33 95 aa0.68□□□□□ -2.3
CDKN3-205ENST00000458126 LOC110117498A0A087WWA1 95 aa0.67□□□□□ -2.3
CDKN3-205ENST00000458126 C8orf59Q8N0T1 100 aaPredicted RBP0.67□□□□□ -2.3
CDKN3-205ENST00000458126 A0A087WVE0 104 aa0.66□□□□□ -2.3
CDKN3-205ENST00000458126 SMIM13P0DJ93 91 aa0.66□□□□□ -2.3
CDKN3-205ENST00000458126 COX7BP24311 80 aa0.66□□□□□ -2.3
CDKN3-205ENST00000458126 OCIAD2Q56VL3 154 aa0.66□□□□□ -2.3
CDKN3-205ENST00000458126 IGIPA6NJ69 53 aa0.65□□□□□ -2.31
CDKN3-205ENST00000458126 PLA2G10O15496 165 aa0.65□□□□□ -2.31
CDKN3-205ENST00000458126 ANAPC13Q9BS18 74 aa0.65□□□□□ -2.31
CDKN3-205ENST00000458126 LINC01546A6NGU7 62 aa0.64□□□□□ -2.31
CDKN3-205ENST00000458126 CENPXA8MT69 81 aa0.64□□□□□ -2.31
CDKN3-205ENST00000458126 GATCO43716 136 aaKnown RBP0.64□□□□□ -2.31
CDKN3-205ENST00000458126 C2orf91Q6ZV80 131 aa0.64□□□□□ -2.31
CDKN3-205ENST00000458126 RAB37Q96AX2 223 aa0.64□□□□□ -2.31
CDKN3-205ENST00000458126 TPRKBQ9Y3C4 175 aa0.64□□□□□ -2.31
CDKN3-205ENST00000458126 HMSDA8MTL9 139 aa0.63□□□□□ -2.31
CDKN3-205ENST00000458126 H3BRM9 83 aa0.63□□□□□ -2.31
CDKN3-205ENST00000458126 MCFD2Q8NI22 146 aa0.63□□□□□ -2.31
CDKN3-205ENST00000458126 NDUFC2O95298 119 aa0.62□□□□□ -2.31
CDKN3-205ENST00000458126 TEN1Q86WV5 123 aa0.62□□□□□ -2.31
CDKN3-205ENST00000458126 S100A2P29034 98 aa0.61□□□□□ -2.31
CDKN3-205ENST00000458126 CYSLTR1Q9Y271 337 aa0.61□□□□□ -2.31
CDKN3-205ENST00000458126 MRPS10P82664 201 aaKnown RBP0.6□□□□□ -2.31
CDKN3-205ENST00000458126 BATFQ16520 125 aa0.6□□□□□ -2.31
CDKN3-205ENST00000458126 SMIM4Q8WVI0 70 aa0.6□□□□□ -2.31
CDKN3-205ENST00000458126 NAA38Q9BRA0 125 aaKnown RBP0.6□□□□□ -2.31
CDKN3-205ENST00000458126 A0A1B0GXF2 115 aa0.59□□□□□ -2.31
CDKN3-205ENST00000458126 LINC00862A6NCI5 91 aa0.58□□□□□ -2.32
CDKN3-205ENST00000458126 FAM25AB3EWG3 89 aa0.58□□□□□ -2.32
CDKN3-205ENST00000458126 FAM25CB3EWG5 89 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms