RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
ERCC3-204ENST00000456257 LAMTOR3Q9UHA4 124 aa4.57□□□□□ -1.68
ERCC3-204ENST00000456257 ZNF861PO60384 105 aa4.56□□□□□ -1.68
ERCC3-204ENST00000456257 PRLHP81277 87 aa4.56□□□□□ -1.68
ERCC3-204ENST00000456257 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
ERCC3-204ENST00000456257 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
ERCC3-204ENST00000456257 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 UBE2AP49459 152 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 SCXQ7RTU7 201 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 LINC00643Q86TS7 51 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 DSCR8Q96T75 97 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 VPS25Q9BRG1 176 aa4.55□□□□□ -1.68
ERCC3-204ENST00000456257 SRRM2Q9UQ35 2752 aaKnown RBP4.54□□□□□ -1.68
ERCC3-204ENST00000456257 IGLV7-43P04211 117 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 Q6JHZ5 121 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 DEFB105AQ8NG35 78 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 HIGD2AQ9BW72 106 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 FAT2Q9NYQ8 4349 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 PKD1P98161 4303 aa4.54□□□□□ -1.68
ERCC3-204ENST00000456257 XGP55808 180 aa4.53□□□□□ -1.68
ERCC3-204ENST00000456257 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
ERCC3-204ENST00000456257 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
ERCC3-204ENST00000456257 IMUPQ9GZP8 106 aa4.53□□□□□ -1.68
ERCC3-204ENST00000456257 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
ERCC3-204ENST00000456257 CRYGAP11844 174 aa4.52□□□□□ -1.69
ERCC3-204ENST00000456257 Q6Q795 121 aa4.52□□□□□ -1.69
ERCC3-204ENST00000456257 SACSQ9NZJ4 4579 aa4.52□□□□□ -1.69
ERCC3-204ENST00000456257 TRBV7-7A0A0K0K1E9 115 aa4.51□□□□□ -1.69
ERCC3-204ENST00000456257 C1orf137Q5JT78 98 aa4.51□□□□□ -1.69
ERCC3-204ENST00000456257 C3orf22Q8N5N4 141 aa4.51□□□□□ -1.69
ERCC3-204ENST00000456257 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
ERCC3-204ENST00000456257 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
ERCC3-204ENST00000456257 ZNF706Q9Y5V0 76 aaPredicted RBP4.51□□□□□ -1.69
ERCC3-204ENST00000456257 MT-ATP8P03928 68 aa4.5□□□□□ -1.69
ERCC3-204ENST00000456257 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
ERCC3-204ENST00000456257 Q8NBF4 154 aa4.5□□□□□ -1.69
ERCC3-204ENST00000456257 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
ERCC3-204ENST00000456257 IGFL1Q6UW32 110 aa4.49□□□□□ -1.69
ERCC3-204ENST00000456257 F8WEM9 126 aa4.48□□□□□ -1.69
ERCC3-204ENST00000456257 Q6ZVQ6 151 aa4.48□□□□□ -1.69
ERCC3-204ENST00000456257 UBL5Q9BZL1 73 aa4.48□□□□□ -1.69
ERCC3-204ENST00000456257 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
ERCC3-204ENST00000456257 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
ERCC3-204ENST00000456257 ATP5EP2Q5VTU8 51 aa4.47□□□□□ -1.69
ERCC3-204ENST00000456257 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
ERCC3-204ENST00000456257 RYR2Q92736 4967 aa4.46□□□□□ -1.7
ERCC3-204ENST00000456257 A0A1B0GV72 72 aa4.46□□□□□ -1.7
ERCC3-204ENST00000456257 CXCL6P80162 114 aa4.46□□□□□ -1.7
ERCC3-204ENST00000456257 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
ERCC3-204ENST00000456257 HYDINQ4G0P3 5121 aa4.45□□□□□ -1.7
ERCC3-204ENST00000456257 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
ERCC3-204ENST00000456257 CD164Q04900 197 aa4.45□□□□□ -1.7
ERCC3-204ENST00000456257 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
ERCC3-204ENST00000456257 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
ERCC3-204ENST00000456257 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
ERCC3-204ENST00000456257 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
ERCC3-204ENST00000456257 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
ERCC3-204ENST00000456257 HIST1H4AP62805 103 aaKnown RBP4.43□□□□□ -1.7
ERCC3-204ENST00000456257 NREPQ16612 68 aa4.43□□□□□ -1.7
ERCC3-204ENST00000456257 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
ERCC3-204ENST00000456257 HAMPP81172 84 aa4.42□□□□□ -1.7
ERCC3-204ENST00000456257 Q5XG85 94 aa4.42□□□□□ -1.7
ERCC3-204ENST00000456257 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
ERCC3-204ENST00000456257 ANAPC11Q9NYG5 84 aa4.41□□□□□ -1.7
ERCC3-204ENST00000456257 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
ERCC3-204ENST00000456257 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
ERCC3-204ENST00000456257 KRTAP13-2Q52LG2 175 aa4.4□□□□□ -1.71
ERCC3-204ENST00000456257 A0A087X002 238 aa4.39□□□□□ -1.71
ERCC3-204ENST00000456257 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
ERCC3-204ENST00000456257 FAM229AH3BQW9 127 aa4.39□□□□□ -1.71
ERCC3-204ENST00000456257 DYNC1H1Q14204 4646 aaKnown RBP4.39□□□□□ -1.71
ERCC3-204ENST00000456257 A0A087WSZ3 146 aa4.38□□□□□ -1.71
ERCC3-204ENST00000456257 IGLV9-49A0A0B4J1Y8 123 aa4.38□□□□□ -1.71
ERCC3-204ENST00000456257 BPY2O14599 106 aa4.38□□□□□ -1.71
ERCC3-204ENST00000456257 DSCR10P59022 87 aa4.38□□□□□ -1.71
ERCC3-204ENST00000456257 MOBPQ13875 183 aa4.38□□□□□ -1.71
ERCC3-204ENST00000456257 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
ERCC3-204ENST00000456257 Q96NJ1 140 aa4.37□□□□□ -1.71
ERCC3-204ENST00000456257 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
ERCC3-204ENST00000456257 J3KT08 172 aa4.36□□□□□ -1.71
ERCC3-204ENST00000456257 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
ERCC3-204ENST00000456257 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
ERCC3-204ENST00000456257 C9orf153Q5TBE3 101 aa4.36□□□□□ -1.71
ERCC3-204ENST00000456257 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
ERCC3-204ENST00000456257 RYR1P21817 5038 aa4.35□□□□□ -1.71
ERCC3-204ENST00000456257 SS18L2Q9UHA2 77 aa4.35□□□□□ -1.71
ERCC3-204ENST00000456257 PCP4P48539 62 aa4.34□□□□□ -1.71
ERCC3-204ENST00000456257 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
ERCC3-204ENST00000456257 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
ERCC3-204ENST00000456257 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
ERCC3-204ENST00000456257 A8MWP4 228 aa4.33□□□□□ -1.72
ERCC3-204ENST00000456257 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
ERCC3-204ENST00000456257 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
ERCC3-204ENST00000456257 A0A087WVE0 104 aa4.32□□□□□ -1.72
ERCC3-204ENST00000456257 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
ERCC3-204ENST00000456257 ATOX1O00244 68 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms