RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CSNK1G2-AS1Q8NCQ2 148 aa3.44□□□□□ -1.86
CSMD3-204ENST00000455883 LY6G6CO95867 125 aa3.44□□□□□ -1.86
CSMD3-204ENST00000455883 LINC00304Q8N9R0 145 aa3.44□□□□□ -1.86
CSMD3-204ENST00000455883 TRIOO75962 3097 aa3.44□□□□□ -1.86
CSMD3-204ENST00000455883 Q9UF83 564 aa3.43□□□□□ -1.86
CSMD3-204ENST00000455883 Q8N377 158 aa3.42□□□□□ -1.86
CSMD3-204ENST00000455883 VWFP04275 2813 aa3.42□□□□□ -1.86
CSMD3-204ENST00000455883 TENM4Q6N022 2769 aa3.41□□□□□ -1.86
CSMD3-204ENST00000455883 SPACA4Q8TDM5 124 aa3.41□□□□□ -1.86
CSMD3-204ENST00000455883 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
CSMD3-204ENST00000455883 A0A1B0GU33 70 aa3.41□□□□□ -1.86
CSMD3-204ENST00000455883 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
CSMD3-204ENST00000455883 RTL8CO15255 209 aa3.4□□□□□ -1.86
CSMD3-204ENST00000455883 C10orf99Q6UWK7 81 aa3.4□□□□□ -1.87
CSMD3-204ENST00000455883 PSORS1C2Q9UIG4 136 aa3.4□□□□□ -1.87
CSMD3-204ENST00000455883 SPRR1BP22528 89 aa3.39□□□□□ -1.87
CSMD3-204ENST00000455883 LINC00588Q9Y4M8 146 aa3.39□□□□□ -1.87
CSMD3-204ENST00000455883 Q96NJ1 140 aa3.39□□□□□ -1.87
CSMD3-204ENST00000455883 IGLV7-43P04211 117 aa3.37□□□□□ -1.87
CSMD3-204ENST00000455883 DEFB116Q30KQ4 102 aa3.37□□□□□ -1.87
CSMD3-204ENST00000455883 SPRR1AP35321 89 aa3.37□□□□□ -1.87
CSMD3-204ENST00000455883 Q6ZR54 194 aa3.36□□□□□ -1.87
CSMD3-204ENST00000455883 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
CSMD3-204ENST00000455883 PKD1L1Q8TDX9 2849 aa3.36□□□□□ -1.87
CSMD3-204ENST00000455883 FBN2P35556 2912 aa3.36□□□□□ -1.87
CSMD3-204ENST00000455883 COL12A1Q99715 3063 aa3.36□□□□□ -1.87
CSMD3-204ENST00000455883 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
CSMD3-204ENST00000455883 C18orf65Q6ZTR6 163 aa3.36□□□□□ -1.87
CSMD3-204ENST00000455883 WWC2-AS2Q96NR7 200 aa3.35□□□□□ -1.87
CSMD3-204ENST00000455883 RPS29P62273 56 aaKnown RBP3.35□□□□□ -1.87
CSMD3-204ENST00000455883 Q5XG85 94 aa3.34□□□□□ -1.87
CSMD3-204ENST00000455883 C19orf73Q9NVV2 129 aa3.33□□□□□ -1.88
CSMD3-204ENST00000455883 DSCR10P59022 87 aa3.33□□□□□ -1.88
CSMD3-204ENST00000455883 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
CSMD3-204ENST00000455883 ZNF575Q86XF7 245 aa3.33□□□□□ -1.88
CSMD3-204ENST00000455883 APLNQ9ULZ1 77 aa3.33□□□□□ -1.88
CSMD3-204ENST00000455883 COL7A1Q02388 2944 aa3.32□□□□□ -1.88
CSMD3-204ENST00000455883 A0A1W2PNM2 257 aa3.32□□□□□ -1.88
CSMD3-204ENST00000455883 Q5VV11 94 aa3.32□□□□□ -1.88
CSMD3-204ENST00000455883 FP248Q71RG6 208 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-204ENST00000455883 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
CSMD3-204ENST00000455883 ANAPC11Q9NYG5 84 aa3.32□□□□□ -1.88
CSMD3-204ENST00000455883 NOTCH2NLQ7Z3S9 236 aa3.31□□□□□ -1.88
CSMD3-204ENST00000455883 ROMO1P60602 79 aa3.31□□□□□ -1.88
CSMD3-204ENST00000455883 LINC00472Q9H8W2 130 aa3.3□□□□□ -1.88
CSMD3-204ENST00000455883 H3BS24 57 aa3.3□□□□□ -1.88
CSMD3-204ENST00000455883 PRUNE2Q8WUY3 3088 aa3.3□□□□□ -1.88
CSMD3-204ENST00000455883 A0A087WTM6 91 aa3.3□□□□□ -1.88
CSMD3-204ENST00000455883 ZCCHC13Q8WW36 166 aaKnown RBP3.3□□□□□ -1.88
CSMD3-204ENST00000455883 A0A1W2PPR1 153 aa3.29□□□□□ -1.88
CSMD3-204ENST00000455883 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
CSMD3-204ENST00000455883 LCE6AA0A183 80 aa3.29□□□□□ -1.88
CSMD3-204ENST00000455883 M0QZ58 72 aa3.29□□□□□ -1.88
CSMD3-204ENST00000455883 SPATA8Q6RVD6 105 aa3.28□□□□□ -1.88
CSMD3-204ENST00000455883 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.88
CSMD3-204ENST00000455883 C5orf42Q9H799 3197 aa3.28□□□□□ -1.88
CSMD3-204ENST00000455883 GIG44P09565 113 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-204ENST00000455883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.28□□□□□ -1.89
CSMD3-204ENST00000455883 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
CSMD3-204ENST00000455883 LAMA1P25391 3075 aa3.27□□□□□ -1.89
CSMD3-204ENST00000455883 MMP24-AS1A0A0U1RRL7 71 aa3.27□□□□□ -1.89
CSMD3-204ENST00000455883 DMXL1Q9Y485 3027 aa3.27□□□□□ -1.89
CSMD3-204ENST00000455883 PLAC8Q9NZF1 115 aa3.26□□□□□ -1.89
CSMD3-204ENST00000455883 HRNRQ86YZ3 2850 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-204ENST00000455883 FAM168BA1KXE4 195 aa3.25□□□□□ -1.89
CSMD3-204ENST00000455883 Q6ZSA8 131 aa3.24□□□□□ -1.89
CSMD3-204ENST00000455883 PRR26Q8N8Z3 221 aa3.24□□□□□ -1.89
CSMD3-204ENST00000455883 A0A096LNT2 108 aa3.23□□□□□ -1.89
CSMD3-204ENST00000455883 S4R3F8 94 aa3.23□□□□□ -1.89
CSMD3-204ENST00000455883 WDFY4Q6ZS81 3184 aa3.23□□□□□ -1.89
CSMD3-204ENST00000455883 R4GN34 69 aa3.22□□□□□ -1.89
CSMD3-204ENST00000455883 PANO1I0J062 215 aa3.21□□□□□ -1.89
CSMD3-204ENST00000455883 J3QL48 77 aa3.21□□□□□ -1.9
CSMD3-204ENST00000455883 Q5W150 140 aa3.21□□□□□ -1.9
CSMD3-204ENST00000455883 SPINK7P58062 85 aa3.21□□□□□ -1.9
CSMD3-204ENST00000455883 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
CSMD3-204ENST00000455883 CELSR1Q9NYQ6 3014 aa3.2□□□□□ -1.9
CSMD3-204ENST00000455883 GOLGB1Q14789 3259 aaKnown RBP3.19□□□□□ -1.9
CSMD3-204ENST00000455883 ATMQ13315 3056 aa3.18□□□□□ -1.9
CSMD3-204ENST00000455883 ADGRG4Q8IZF6 3080 aa3.18□□□□□ -1.9
CSMD3-204ENST00000455883 KRTAP29-1A8MX34 341 aaPredicted RBP3.17□□□□□ -1.9
CSMD3-204ENST00000455883 A6NN06 94 aa3.17□□□□□ -1.9
CSMD3-204ENST00000455883 K7EIL1 84 aa3.17□□□□□ -1.9
CSMD3-204ENST00000455883 BOD1L1Q8NFC6 3051 aa3.17□□□□□ -1.9
CSMD3-204ENST00000455883 KRTAP4-16G5E9R7 235 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-204ENST00000455883 KRTAP10-9P60411 292 aa3.16□□□□□ -1.9
CSMD3-204ENST00000455883 FREM2Q5SZK8 3169 aa3.16□□□□□ -1.9
CSMD3-204ENST00000455883 Q8N1X5 172 aa3.15□□□□□ -1.9
CSMD3-204ENST00000455883 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
CSMD3-204ENST00000455883 RANBP2P49792 3224 aaKnown RBP3.14□□□□□ -1.91
CSMD3-204ENST00000455883 A0A0D9SG42 100 aa3.14□□□□□ -1.91
CSMD3-204ENST00000455883 FBN1P35555 2871 aaKnown RBP3.14□□□□□ -1.91
CSMD3-204ENST00000455883 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
CSMD3-204ENST00000455883 KRTAP24-1Q3LI83 254 aa3.13□□□□□ -1.91
CSMD3-204ENST00000455883 OXTP01178 125 aa3.13□□□□□ -1.91
CSMD3-204ENST00000455883 REV3LO60673 3130 aa3.11□□□□□ -1.91
CSMD3-204ENST00000455883 HTTP42858 3142 aa3.11□□□□□ -1.91
CSMD3-204ENST00000455883 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
CSMD3-204ENST00000455883 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
CSMD3-204ENST00000455883 TNP1P09430 55 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms