RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 Q8N377 158 aa4.97□□□□□ -1.61
BRCC3-208ENST00000453705 VWFP04275 2813 aa4.97□□□□□ -1.61
BRCC3-208ENST00000453705 COX17Q14061 63 aa4.96□□□□□ -1.62
BRCC3-208ENST00000453705 LINC00308Q8TCZ7 52 aa4.96□□□□□ -1.62
BRCC3-208ENST00000453705 IGHV3-64A0A075B6Q5 118 aa4.96□□□□□ -1.62
BRCC3-208ENST00000453705 GVQW2A0A096LPI5 108 aaPredicted RBP4.96□□□□□ -1.62
BRCC3-208ENST00000453705 PRB2P02812 416 aaPredicted RBP4.96□□□□□ -1.62
BRCC3-208ENST00000453705 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.62
BRCC3-208ENST00000453705 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
BRCC3-208ENST00000453705 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
BRCC3-208ENST00000453705 NOTCH3Q9UM47 2321 aa4.95□□□□□ -1.62
BRCC3-208ENST00000453705 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.95□□□□□ -1.62
BRCC3-208ENST00000453705 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
BRCC3-208ENST00000453705 DYNC2H1Q8NCM8 4307 aaKnown RBP4.94□□□□□ -1.62
BRCC3-208ENST00000453705 LRCOL1A6NCL2 159 aa4.94□□□□□ -1.62
BRCC3-208ENST00000453705 HIGD2BQ4VC39 106 aa4.94□□□□□ -1.62
BRCC3-208ENST00000453705 DEFB4AO15263 64 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 LINC01556Q5JQF7 62 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 KRTAP26-1Q6PEX3 210 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 C14orf132Q9NPU4 83 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 H0YGX0 51 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 CSAG1Q6PB30 78 aa4.93□□□□□ -1.62
BRCC3-208ENST00000453705 TRAV10A0A0B4J240 114 aa4.92□□□□□ -1.62
BRCC3-208ENST00000453705 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
BRCC3-208ENST00000453705 C9orf129Q5T035 196 aaKnown RBP4.91□□□□□ -1.62
BRCC3-208ENST00000453705 ERC2-IT1O76042 136 aa4.91□□□□□ -1.62
BRCC3-208ENST00000453705 CYP4F30PQ9H0H9 118 aa4.91□□□□□ -1.62
BRCC3-208ENST00000453705 ENHOQ6UWT2 76 aa4.9□□□□□ -1.62
BRCC3-208ENST00000453705 IGLV7-46A0A075B6I9 117 aa4.9□□□□□ -1.63
BRCC3-208ENST00000453705 JMJD7-PLA2G4BH0Y9G9 81 aa4.9□□□□□ -1.63
BRCC3-208ENST00000453705 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
BRCC3-208ENST00000453705 ANGP03950 147 aaKnown RBP4.89□□□□□ -1.63
BRCC3-208ENST00000453705 Q6ZR54 194 aa4.89□□□□□ -1.63
BRCC3-208ENST00000453705 LINC00167Q96N53 147 aa4.89□□□□□ -1.63
BRCC3-208ENST00000453705 DEFB131BA0A096LNP1 70 aa4.88□□□□□ -1.63
BRCC3-208ENST00000453705 TRBV7-4A0A0J9YYF1 115 aa4.88□□□□□ -1.63
BRCC3-208ENST00000453705 HTN3P15516 51 aa4.88□□□□□ -1.63
BRCC3-208ENST00000453705 CCL18P55774 89 aa4.88□□□□□ -1.63
BRCC3-208ENST00000453705 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
BRCC3-208ENST00000453705 DNAH1Q9P2D7 4330 aa4.87□□□□□ -1.63
BRCC3-208ENST00000453705 IGKV2-28A0A075B6P5 120 aa4.87□□□□□ -1.63
BRCC3-208ENST00000453705 H3BQ85 93 aa4.87□□□□□ -1.63
BRCC3-208ENST00000453705 IGKV2D-28P01615 120 aa4.87□□□□□ -1.63
BRCC3-208ENST00000453705 A0A087WYN8 130 aa4.87□□□□□ -1.63
BRCC3-208ENST00000453705 NCR3O14931 201 aa4.86□□□□□ -1.63
BRCC3-208ENST00000453705 ORMDL1Q9P0S3 153 aa4.86□□□□□ -1.63
BRCC3-208ENST00000453705 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
BRCC3-208ENST00000453705 H3BPC8 53 aa4.85□□□□□ -1.63
BRCC3-208ENST00000453705 PANO1I0J062 215 aa4.85□□□□□ -1.63
BRCC3-208ENST00000453705 SPAG11BQ08648 103 aa4.85□□□□□ -1.63
BRCC3-208ENST00000453705 LIMD2Q9BT23 127 aa4.85□□□□□ -1.63
BRCC3-208ENST00000453705 WFDC10BQ8IUB3 73 aa4.85□□□□□ -1.63
BRCC3-208ENST00000453705 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 DNAH9Q9NYC9 4486 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 LINC00158P58513 81 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 KLK12Q9UKR0 248 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 LINC00483Q53H64 154 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 SMIM11BQ8TCY0 68 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 TOMM7Q9P0U1 55 aa4.84□□□□□ -1.63
BRCC3-208ENST00000453705 Q8N3U1 123 aa4.83□□□□□ -1.64
BRCC3-208ENST00000453705 IGKV3OR2-268A0A0C4DH90 116 aa4.82□□□□□ -1.64
BRCC3-208ENST00000453705 PSCAO43653 123 aa4.82□□□□□ -1.64
BRCC3-208ENST00000453705 TMEM254Q8TBM7 123 aa4.82□□□□□ -1.64
BRCC3-208ENST00000453705 PRKDCP78527 4128 aaKnown RBP4.82□□□□□ -1.64
BRCC3-208ENST00000453705 DNAH6Q9C0G6 4158 aa4.82□□□□□ -1.64
BRCC3-208ENST00000453705 LOC110117498A0A087WWA1 95 aa4.81□□□□□ -1.64
BRCC3-208ENST00000453705 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
BRCC3-208ENST00000453705 TYMSOSQ8TAI1 123 aa4.81□□□□□ -1.64
BRCC3-208ENST00000453705 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
BRCC3-208ENST00000453705 CLPSL2Q6UWE3 100 aa4.81□□□□□ -1.64
BRCC3-208ENST00000453705 C6orf48Q9UBA6 75 aa4.81□□□□□ -1.64
BRCC3-208ENST00000453705 APLNQ9ULZ1 77 aa4.8□□□□□ -1.64
BRCC3-208ENST00000453705 UNQ6190/PRO20217Q6UXQ8 127 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 TENM3Q9P273 2699 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 NUPR2A6NF83 97 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 RTL8CO15255 209 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 NREPQ16612 68 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 PDE6GP18545 87 aa4.79□□□□□ -1.64
BRCC3-208ENST00000453705 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
BRCC3-208ENST00000453705 DNAH7Q8WXX0 4024 aa4.78□□□□□ -1.64
BRCC3-208ENST00000453705 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
BRCC3-208ENST00000453705 SLPIP03973 132 aa4.77□□□□□ -1.65
BRCC3-208ENST00000453705 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
BRCC3-208ENST00000453705 CNBPP62633 177 aaKnown RBP4.76□□□□□ -1.65
BRCC3-208ENST00000453705 HAMPP81172 84 aa4.74□□□□□ -1.65
BRCC3-208ENST00000453705 C14orf177Q52M58 125 aa4.74□□□□□ -1.65
BRCC3-208ENST00000453705 KMT2CQ8NEZ4 4911 aaKnown RBP4.74□□□□□ -1.65
BRCC3-208ENST00000453705 LCE6AA0A183 80 aa4.74□□□□□ -1.65
BRCC3-208ENST00000453705 LINC00575Q6W349 94 aa4.74□□□□□ -1.65
BRCC3-208ENST00000453705 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
BRCC3-208ENST00000453705 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
BRCC3-208ENST00000453705 UBE2DNLQ8IWF7 75 aa4.73□□□□□ -1.65
BRCC3-208ENST00000453705 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
BRCC3-208ENST00000453705 ELOF1P60002 83 aaKnown RBP4.72□□□□□ -1.65
BRCC3-208ENST00000453705 KCNQ1DNQ9H478 68 aa4.72□□□□□ -1.65
BRCC3-208ENST00000453705 CSMD3Q7Z407 3707 aa4.72□□□□□ -1.65
BRCC3-208ENST00000453705 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
BRCC3-208ENST00000453705 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms