RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
USP1-204ENST00000452143 A4D1N5 150 aa5.79□□□□□ -1.48
USP1-204ENST00000452143 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
USP1-204ENST00000452143 TCL1BO95988 128 aa5.78□□□□□ -1.48
USP1-204ENST00000452143 IFITM1P13164 125 aa5.78□□□□□ -1.48
USP1-204ENST00000452143 SCGB1D4Q6XE38 83 aa5.78□□□□□ -1.48
USP1-204ENST00000452143 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
USP1-204ENST00000452143 HIST1H2BKO60814 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BJP06899 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BOP23527 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BBP33778 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BDP58876 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BCP62807 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST2H2BEQ16778 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.77□□□□□ -1.49
USP1-204ENST00000452143 Q6ZVH6 145 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BHQ93079 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BNQ99877 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 HIST1H2BMQ99879 126 aa5.77□□□□□ -1.49
USP1-204ENST00000452143 A6NDN8 102 aa5.76□□□□□ -1.49
USP1-204ENST00000452143 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
USP1-204ENST00000452143 A0A0G2JQZ4 141 aa5.75□□□□□ -1.49
USP1-204ENST00000452143 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
USP1-204ENST00000452143 F8WEM9 126 aa5.74□□□□□ -1.49
USP1-204ENST00000452143 C3orf79P0CE67 100 aa5.74□□□□□ -1.49
USP1-204ENST00000452143 C20orf202A1L168 122 aa5.72□□□□□ -1.49
USP1-204ENST00000452143 KRTDAPP60985 99 aa5.71□□□□□ -1.5
USP1-204ENST00000452143 Q6JHZ5 121 aa5.71□□□□□ -1.5
USP1-204ENST00000452143 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
USP1-204ENST00000452143 SMIM11BQ8TCY0 68 aa5.71□□□□□ -1.5
USP1-204ENST00000452143 CLEC2BQ92478 149 aa5.71□□□□□ -1.5
USP1-204ENST00000452143 TRBV7-7A0A0K0K1E9 115 aa5.69□□□□□ -1.5
USP1-204ENST00000452143 VAMP3Q15836 100 aa5.69□□□□□ -1.5
USP1-204ENST00000452143 COA6Q5JTJ3 125 aaKnown RBP5.69□□□□□ -1.5
USP1-204ENST00000452143 Q75L30 129 aa5.69□□□□□ -1.5
USP1-204ENST00000452143 SLC7A5P1Q8MH63 180 aa5.69□□□□□ -1.5
USP1-204ENST00000452143 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
USP1-204ENST00000452143 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
USP1-204ENST00000452143 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
USP1-204ENST00000452143 Q6ZQY7 126 aa5.67□□□□□ -1.5
USP1-204ENST00000452143 IGFL1Q6UW32 110 aa5.66□□□□□ -1.5
USP1-204ENST00000452143 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
USP1-204ENST00000452143 hADV29S1A0JD25 119 aa5.65□□□□□ -1.5
USP1-204ENST00000452143 SNRPEP62304 92 aaKnown RBP5.65□□□□□ -1.5
USP1-204ENST00000452143 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
USP1-204ENST00000452143 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.5
USP1-204ENST00000452143 USH2AO75445 5202 aa5.65□□□□□ -1.51
USP1-204ENST00000452143 Q6Q795 121 aa5.64□□□□□ -1.51
USP1-204ENST00000452143 CFC1P0CG37 223 aa5.63□□□□□ -1.51
USP1-204ENST00000452143 OCIAD2Q56VL3 154 aa5.63□□□□□ -1.51
USP1-204ENST00000452143 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
USP1-204ENST00000452143 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
USP1-204ENST00000452143 SCGB1D1O95968 90 aa5.62□□□□□ -1.51
USP1-204ENST00000452143 LST1O00453 97 aa5.61□□□□□ -1.51
USP1-204ENST00000452143 BVES-AS1Q5T3Y7 98 aa5.61□□□□□ -1.51
USP1-204ENST00000452143 SS18L2Q9UHA2 77 aa5.61□□□□□ -1.51
USP1-204ENST00000452143 Q96NJ1 140 aa5.59□□□□□ -1.51
USP1-204ENST00000452143 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.51
USP1-204ENST00000452143 SNHG12Q9BXW3 62 aa5.59□□□□□ -1.51
USP1-204ENST00000452143 TRBV20-1A0A075B6N2 111 aa5.57□□□□□ -1.52
USP1-204ENST00000452143 C9orf118A6NHY6 69 aa5.57□□□□□ -1.52
USP1-204ENST00000452143 A8MUU9 505 aa5.57□□□□□ -1.52
USP1-204ENST00000452143 HSBP1L1C9JCN9 74 aa5.57□□□□□ -1.52
USP1-204ENST00000452143 H3BUT2 72 aa5.57□□□□□ -1.52
USP1-204ENST00000452143 TEN1Q86WV5 123 aa5.54□□□□□ -1.52
USP1-204ENST00000452143 C12orf57Q99622 126 aa5.54□□□□□ -1.52
USP1-204ENST00000452143 SNCGO76070 127 aa5.52□□□□□ -1.53
USP1-204ENST00000452143 HIST1H4GQ99525 98 aa5.52□□□□□ -1.53
USP1-204ENST00000452143 HIST1H2BLQ99880 126 aa5.52□□□□□ -1.53
USP1-204ENST00000452143 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
USP1-204ENST00000452143 A0A087WSZ3 146 aa5.51□□□□□ -1.53
USP1-204ENST00000452143 S100A2P29034 98 aa5.51□□□□□ -1.53
USP1-204ENST00000452143 HIST3H2BBQ8N257 126 aa5.51□□□□□ -1.53
USP1-204ENST00000452143 NDUFV3P56181 108 aaKnown RBP5.5□□□□□ -1.53
USP1-204ENST00000452143 H0YGX0 51 aa5.49□□□□□ -1.53
USP1-204ENST00000452143 DSCR10P59022 87 aa5.48□□□□□ -1.53
USP1-204ENST00000452143 SIGMAR1Q99720 223 aa5.48□□□□□ -1.53
USP1-204ENST00000452143 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
USP1-204ENST00000452143 H3BMG7 143 aa5.47□□□□□ -1.53
USP1-204ENST00000452143 MT2AP02795 61 aa5.47□□□□□ -1.53
USP1-204ENST00000452143 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
USP1-204ENST00000452143 COX8AP10176 69 aa5.47□□□□□ -1.53
USP1-204ENST00000452143 RAB37Q96AX2 223 aa5.47□□□□□ -1.53
USP1-204ENST00000452143 A0A0B4J2C4 111 aa5.46□□□□□ -1.54
USP1-204ENST00000452143 A0A1B0GX51 115 aa5.46□□□□□ -1.54
USP1-204ENST00000452143 DLEU1O43261 78 aa5.46□□□□□ -1.54
USP1-204ENST00000452143 FAM218AQ96MZ4 157 aa5.46□□□□□ -1.54
USP1-204ENST00000452143 LINC00313P59037 77 aa5.45□□□□□ -1.54
USP1-204ENST00000452143 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
USP1-204ENST00000452143 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
USP1-204ENST00000452143 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
USP1-204ENST00000452143 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
USP1-204ENST00000452143 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
USP1-204ENST00000452143 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
USP1-204ENST00000452143 MT1FP04733 61 aa5.43□□□□□ -1.54
USP1-204ENST00000452143 FABP2P12104 132 aa5.43□□□□□ -1.54
USP1-204ENST00000452143 TRBV7-4A0A0J9YYF1 115 aa5.42□□□□□ -1.54
USP1-204ENST00000452143 S100A6P06703 90 aa5.42□□□□□ -1.54
USP1-204ENST00000452143 HIGD1BQ9P298 99 aa5.42□□□□□ -1.54
USP1-204ENST00000452143 IGKV4-1P06312 121 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms