RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 GHRHP01286 108 aa10.36□□□□□ -0.75
PRPF40A-204ENST00000450303 IGLV7-43P04211 117 aa10.36□□□□□ -0.75
PRPF40A-204ENST00000450303 BCE1O60756 84 aa10.35□□□□□ -0.75
PRPF40A-204ENST00000450303 TRBV7-6A0A0J9YX20 115 aa10.34□□□□□ -0.75
PRPF40A-204ENST00000450303 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
PRPF40A-204ENST00000450303 SPRR1AP35321 89 aa10.34□□□□□ -0.75
PRPF40A-204ENST00000450303 FAM19A1Q7Z5A9 133 aa10.34□□□□□ -0.75
PRPF40A-204ENST00000450303 UBE2AP49459 152 aa10.33□□□□□ -0.76
PRPF40A-204ENST00000450303 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
PRPF40A-204ENST00000450303 UBR4Q5T4S7 5183 aa10.32□□□□□ -0.76
PRPF40A-204ENST00000450303 hADV29S1A0JD25 119 aa10.32□□□□□ -0.76
PRPF40A-204ENST00000450303 COX7BP24311 80 aa10.31□□□□□ -0.76
PRPF40A-204ENST00000450303 JMJD7-PLA2G4BH0Y9G9 81 aa10.3□□□□□ -0.76
PRPF40A-204ENST00000450303 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-204ENST00000450303 H0Y9J4 135 aa10.29□□□□□ -0.76
PRPF40A-204ENST00000450303 B5MCH6 92 aa10.28□□□□□ -0.76
PRPF40A-204ENST00000450303 ZNF861PO60384 105 aa10.27□□□□□ -0.77
PRPF40A-204ENST00000450303 MT-ATP8P03928 68 aa10.27□□□□□ -0.77
PRPF40A-204ENST00000450303 ELOF1P60002 83 aaKnown RBP10.27□□□□□ -0.77
PRPF40A-204ENST00000450303 Q6ZRX8 168 aa10.27□□□□□ -0.77
PRPF40A-204ENST00000450303 PRR26Q8N8Z3 221 aa10.27□□□□□ -0.77
PRPF40A-204ENST00000450303 PRLHP81277 87 aa10.26□□□□□ -0.77
PRPF40A-204ENST00000450303 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
PRPF40A-204ENST00000450303 OBSCN-AS1Q96MR7 158 aa10.26□□□□□ -0.77
PRPF40A-204ENST00000450303 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
PRPF40A-204ENST00000450303 DHRS4-AS1Q9P1J3 65 aa10.24□□□□□ -0.77
PRPF40A-204ENST00000450303 C21orf62-AS1Q17RA5 79 aa10.23□□□□□ -0.77
PRPF40A-204ENST00000450303 KRTAP13-1Q8IUC0 172 aa10.23□□□□□ -0.77
PRPF40A-204ENST00000450303 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
PRPF40A-204ENST00000450303 C14orf132Q9NPU4 83 aa10.22□□□□□ -0.77
PRPF40A-204ENST00000450303 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.77
PRPF40A-204ENST00000450303 Q6Q795 121 aa10.21□□□□□ -0.77
PRPF40A-204ENST00000450303 LINC00643Q86TS7 51 aa10.21□□□□□ -0.77
PRPF40A-204ENST00000450303 SMCR5Q8TEV8 140 aa10.2□□□□□ -0.78
PRPF40A-204ENST00000450303 LAMTOR3Q9UHA4 124 aa10.2□□□□□ -0.78
PRPF40A-204ENST00000450303 Q6ZQY7 126 aa10.19□□□□□ -0.78
PRPF40A-204ENST00000450303 CCKP06307 115 aa10.18□□□□□ -0.78
PRPF40A-204ENST00000450303 PDE6GP18545 87 aa10.18□□□□□ -0.78
PRPF40A-204ENST00000450303 Q9BRP9 147 aa10.18□□□□□ -0.78
PRPF40A-204ENST00000450303 LRP2P98164 4655 aa10.17□□□□□ -0.78
PRPF40A-204ENST00000450303 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
PRPF40A-204ENST00000450303 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-204ENST00000450303 IMUPQ9GZP8 106 aa10.15□□□□□ -0.78
PRPF40A-204ENST00000450303 DSCR8Q96T75 97 aa10.14□□□□□ -0.79
PRPF40A-204ENST00000450303 TRBV7-7A0A0K0K1E9 115 aa10.13□□□□□ -0.79
PRPF40A-204ENST00000450303 LOC110117498A0A087WWA1 95 aa10.12□□□□□ -0.79
PRPF40A-204ENST00000450303 A0A1B0GV72 72 aa10.12□□□□□ -0.79
PRPF40A-204ENST00000450303 ERC2-IT1O76042 136 aa10.12□□□□□ -0.79
PRPF40A-204ENST00000450303 Q6JHZ5 121 aa10.09□□□□□ -0.79
PRPF40A-204ENST00000450303 SPRR4Q96PI1 79 aa10.09□□□□□ -0.79
PRPF40A-204ENST00000450303 NDUFV3P56181 108 aaKnown RBP10.08□□□□□ -0.8
PRPF40A-204ENST00000450303 ATP5EP2Q5VTU8 51 aa10.07□□□□□ -0.8
PRPF40A-204ENST00000450303 ST20-AS1Q8NBB2 130 aa10.07□□□□□ -0.8
PRPF40A-204ENST00000450303 DEFB105AQ8NG35 78 aa10.07□□□□□ -0.8
PRPF40A-204ENST00000450303 UBL5Q9BZL1 73 aa10.07□□□□□ -0.8
PRPF40A-204ENST00000450303 ANAPC11Q9NYG5 84 aa10.07□□□□□ -0.8
PRPF40A-204ENST00000450303 A0A087X002 238 aa10.06□□□□□ -0.8
PRPF40A-204ENST00000450303 Q6ZQT0 140 aa10.06□□□□□ -0.8
PRPF40A-204ENST00000450303 LINC00846Q9NV44 126 aa10.06□□□□□ -0.8
PRPF40A-204ENST00000450303 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
PRPF40A-204ENST00000450303 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
PRPF40A-204ENST00000450303 SPRR1BP22528 89 aa10.03□□□□□ -0.8
PRPF40A-204ENST00000450303 LINC00483Q53H64 154 aa10.03□□□□□ -0.8
PRPF40A-204ENST00000450303 LPAP08519 4548 aa10.03□□□□□ -0.8
PRPF40A-204ENST00000450303 CRYGAP11844 174 aa10.02□□□□□ -0.81
PRPF40A-204ENST00000450303 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.81
PRPF40A-204ENST00000450303 RNF213Q63HN8 5207 aa10.02□□□□□ -0.81
PRPF40A-204ENST00000450303 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
PRPF40A-204ENST00000450303 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
PRPF40A-204ENST00000450303 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
PRPF40A-204ENST00000450303 PRR4Q16378 134 aa10□□□□□ -0.81
PRPF40A-204ENST00000450303 Q8N377 158 aa10□□□□□ -0.81
PRPF40A-204ENST00000450303 KRTAP13-2Q52LG2 175 aa9.98□□□□□ -0.81
PRPF40A-204ENST00000450303 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
PRPF40A-204ENST00000450303 F8WEM9 126 aa9.97□□□□□ -0.81
PRPF40A-204ENST00000450303 FAM236AA0A1B0GUQ0 79 aa9.95□□□□□ -0.82
PRPF40A-204ENST00000450303 FAM236BA0A1B0GV22 79 aa9.95□□□□□ -0.82
PRPF40A-204ENST00000450303 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
PRPF40A-204ENST00000450303 A0A1B0GW54 56 aa9.93□□□□□ -0.82
PRPF40A-204ENST00000450303 C9orf153Q5TBE3 101 aa9.93□□□□□ -0.82
PRPF40A-204ENST00000450303 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
PRPF40A-204ENST00000450303 C3orf22Q8N5N4 141 aa9.91□□□□□ -0.82
PRPF40A-204ENST00000450303 ATOX1O00244 68 aa9.9□□□□□ -0.82
PRPF40A-204ENST00000450303 Q6ZVQ6 151 aa9.9□□□□□ -0.82
PRPF40A-204ENST00000450303 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.82
PRPF40A-204ENST00000450303 Q8NBF4 154 aa9.9□□□□□ -0.82
PRPF40A-204ENST00000450303 HIST1H4AP62805 103 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-204ENST00000450303 MOBPQ13875 183 aa9.89□□□□□ -0.83
PRPF40A-204ENST00000450303 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
PRPF40A-204ENST00000450303 CXCL6P80162 114 aa9.87□□□□□ -0.83
PRPF40A-204ENST00000450303 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
PRPF40A-204ENST00000450303 IGLV8-61A0A075B6I0 122 aa9.84□□□□□ -0.83
PRPF40A-204ENST00000450303 NREPQ16612 68 aa9.84□□□□□ -0.83
PRPF40A-204ENST00000450303 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
PRPF40A-204ENST00000450303 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
PRPF40A-204ENST00000450303 A0A087WVE0 104 aa9.78□□□□□ -0.84
PRPF40A-204ENST00000450303 UQCRQO14949 82 aa9.77□□□□□ -0.85
PRPF40A-204ENST00000450303 IGFL1Q6UW32 110 aa9.77□□□□□ -0.85
PRPF40A-204ENST00000450303 CD164Q04900 197 aa9.76□□□□□ -0.85
PRPF40A-204ENST00000450303 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms