RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 A0A1W2PNU3 283 aaPredicted RBP1.41□□□□□ -2.18
USP53-202ENST00000450251 C18orf65Q6ZTR6 163 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 ICE1Q9Y2F5 2266 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 KRTAP9-6A0A140TA67 174 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 ABCA4P78363 2273 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 A0A1B0GU33 70 aa1.4□□□□□ -2.18
USP53-202ENST00000450251 PIEZO2Q9H5I5 2752 aa1.4□□□□□ -2.18
USP53-202ENST00000450251 SPRR1BP22528 89 aa1.4□□□□□ -2.18
USP53-202ENST00000450251 CIRBP-AS1Q8TBR5 109 aa1.4□□□□□ -2.18
USP53-202ENST00000450251 UNC80Q8N2C7 3258 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 KALRNO60229 2985 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 A0A0C4DFX4 3053 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 APCP25054 2843 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 KRTAP29-1A8MX34 341 aaPredicted RBP1.4□□□□□ -2.19
USP53-202ENST00000450251 DEFB4AO15263 64 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 SPRR1AP35321 89 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 ANAPC11Q9NYG5 84 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 DNAH10OSP0CZ25 163 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 C10orf99Q6UWK7 81 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 TENM4Q6N022 2769 aa1.4□□□□□ -2.19
USP53-202ENST00000450251 CNTRLQ7Z7A1 2325 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 RTL8CO15255 209 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 WDFY3Q8IZQ1 3526 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 CSNK1G2-AS1Q8NCQ2 148 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 WNK1Q9H4A3 2382 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 ZNF407Q9C0G0 2248 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 MUC4Q99102 2169 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 LINC00483Q53H64 154 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 LINC00472Q9H8W2 130 aa1.39□□□□□ -2.19
USP53-202ENST00000450251 TNCP24821 2201 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.38□□□□□ -2.19
USP53-202ENST00000450251 J3QKU1 62 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 FBN2P35556 2912 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 DOCK10Q96BY6 2186 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 PKDREJQ9NTG1 2253 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 KRTAP4-8Q9BYQ9 185 aa1.38□□□□□ -2.19
USP53-202ENST00000450251 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
USP53-202ENST00000450251 DNAJC13O75165 2243 aa1.37□□□□□ -2.19
USP53-202ENST00000450251 FLNAP21333 2647 aaKnown RBP1.37□□□□□ -2.19
USP53-202ENST00000450251 MXRA5Q9NR99 2828 aa1.37□□□□□ -2.19
USP53-202ENST00000450251 RTTNQ86VV8 2226 aa1.37□□□□□ -2.19
USP53-202ENST00000450251 CFAP54Q96N23 3096 aa1.37□□□□□ -2.19
USP53-202ENST00000450251 NIPBLQ6KC79 2804 aaeCLIP1.37□□□□□ -2.19
USP53-202ENST00000450251 GIG44P09565 113 aaPredicted RBP1.37□□□□□ -2.19
USP53-202ENST00000450251 PLCE1Q9P212 2302 aa1.37□□□□□ -2.19
USP53-202ENST00000450251 APLNQ9ULZ1 77 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 ZNF861PO60384 105 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
USP53-202ENST00000450251 OTOGQ6ZRI0 2925 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 ZZEF1O43149 2961 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 PLXNB1O43157 2135 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 Q5W150 140 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
USP53-202ENST00000450251 MAPK1IP1LQ8NDC0 245 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 LAMA2P24043 3122 aaKnown RBP1.36□□□□□ -2.19
USP53-202ENST00000450251 IGLV5-52A0A0A0MRZ9 124 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 FAM168BA1KXE4 195 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 KRTAP9-7A8MTY7 169 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 KRTAP26-1Q6PEX3 210 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 Q96NJ1 140 aa1.36□□□□□ -2.19
USP53-202ENST00000450251 MYO15AQ9UKN7 3530 aa1.35□□□□□ -2.19
USP53-202ENST00000450251 TNXBP22105 4242 aa1.35□□□□□ -2.19
USP53-202ENST00000450251 STAB2Q8WWQ8 2551 aa1.35□□□□□ -2.19
USP53-202ENST00000450251 NBEAQ8NFP9 2946 aa1.35□□□□□ -2.19
USP53-202ENST00000450251 PDZD2O15018 2839 aa1.35□□□□□ -2.19
USP53-202ENST00000450251 PANO1I0J062 215 aa1.35□□□□□ -2.19
USP53-202ENST00000450251 LRBAP50851 2863 aa1.34□□□□□ -2.19
USP53-202ENST00000450251 C20orf166-AS1Q96NR2 134 aa1.34□□□□□ -2.19
USP53-202ENST00000450251 KRTAP4-16G5E9R7 235 aaPredicted RBP1.34□□□□□ -2.2
USP53-202ENST00000450251 Q8NDZ9 215 aa1.34□□□□□ -2.2
USP53-202ENST00000450251 MED13LQ71F56 2210 aa1.34□□□□□ -2.2
USP53-202ENST00000450251 CASC10Q5T4H9 136 aa1.34□□□□□ -2.2
USP53-202ENST00000450251 AKAP13Q12802 2813 aa1.34□□□□□ -2.2
USP53-202ENST00000450251 AKAP6Q13023 2319 aa1.34□□□□□ -2.2
USP53-202ENST00000450251 A8MUU9 505 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 NDUFAF8A1L188 74 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 KRTAP10-2P60368 255 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 TENM3Q9P273 2699 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 MAP1AP78559 2803 aaPredicted RBP1.33□□□□□ -2.2
USP53-202ENST00000450251 ADM2Q7Z4H4 148 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 SVILO95425 2214 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 SPACA4Q8TDM5 124 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 CSMD1Q96PZ7 3565 aa1.33□□□□□ -2.2
USP53-202ENST00000450251 PSORS1C2Q9UIG4 136 aa1.32□□□□□ -2.2
USP53-202ENST00000450251 TYMSOSQ8TAI1 123 aa1.32□□□□□ -2.2
USP53-202ENST00000450251 A8MU10 97 aa1.32□□□□□ -2.2
USP53-202ENST00000450251 A0A0G2JQZ4 141 aa1.32□□□□□ -2.2
USP53-202ENST00000450251 KRTAP11-1Q8IUC1 163 aa1.32□□□□□ -2.2
USP53-202ENST00000450251 REV3LO60673 3130 aa1.31□□□□□ -2.2
USP53-202ENST00000450251 NBDYA0A0U1RRE5 68 aa1.31□□□□□ -2.2
USP53-202ENST00000450251 Q8N1X5 172 aa1.31□□□□□ -2.2
USP53-202ENST00000450251 CELSR2Q9HCU4 2923 aa1.31□□□□□ -2.2
USP53-202ENST00000450251 LINC00304Q8N9R0 145 aa1.31□□□□□ -2.2
USP53-202ENST00000450251 A0A1W2PNN7 141 aa1.31□□□□□ -2.2
USP53-202ENST00000450251 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms