RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	IGKV2-30	P06310	120 aa		5.19	□□□□□ -1.58
HCG18-238	ENST00000449544	KRTAP26-1	Q6PEX3	210 aa		5.19	□□□□□ -1.58
HCG18-238	ENST00000449544	IGLV5-37	A0A075B6J1	123 aa		5.18	□□□□□ -1.58
HCG18-238	ENST00000449544	LINC01547	P58512	204 aa	Predicted RBP	5.17	□□□□□ -1.58
HCG18-238	ENST00000449544	RBM12B-AS1	Q9P1G2	102 aa		5.17	□□□□□ -1.58
HCG18-238	ENST00000449544	MEGF8	Q7Z7M0	2845 aa		5.17	□□□□□ -1.58
HCG18-238	ENST00000449544	IGKV3D-7	A0A0C4DH55	119 aa		5.16	□□□□□ -1.58
HCG18-238	ENST00000449544	ERC2-IT1	O76042	136 aa		5.16	□□□□□ -1.58
HCG18-238	ENST00000449544	IGLV8-61	A0A075B6I0	122 aa		5.16	□□□□□ -1.58
HCG18-238	ENST00000449544	DNHD1	Q96M86	4753 aa		5.14	□□□□□ -1.59
HCG18-238	ENST00000449544	ANAPC13	Q9BS18	74 aa		5.14	□□□□□ -1.59
HCG18-238	ENST00000449544		F8W1H4	67 aa		5.14	□□□□□ -1.59
HCG18-238	ENST00000449544	MT-ATP8	P03928	68 aa		5.14	□□□□□ -1.59
HCG18-238	ENST00000449544		A0A1B0GVY2	172 aa		5.13	□□□□□ -1.59
HCG18-238	ENST00000449544	TRRAP	Q9Y4A5	3859 aa		5.12	□□□□□ -1.59
HCG18-238	ENST00000449544	hDV103S1	A0JD37	113 aa		5.11	□□□□□ -1.59
HCG18-238	ENST00000449544	LINC01600	Q96MT4	127 aa		5.11	□□□□□ -1.59
HCG18-238	ENST00000449544		A0A0G2JQZ4	141 aa		5.11	□□□□□ -1.59
HCG18-238	ENST00000449544	ACYP1	P07311	99 aa		5.11	□□□□□ -1.59
HCG18-238	ENST00000449544	ANK3	Q12955	4377 aa	Known RBP	5.1	□□□□□ -1.59
HCG18-238	ENST00000449544	FP248	Q71RG6	208 aa	Predicted RBP	5.1	□□□□□ -1.59
HCG18-238	ENST00000449544	FAM236A	A0A1B0GUQ0	79 aa		5.1	□□□□□ -1.59
HCG18-238	ENST00000449544	FAM236B	A0A1B0GV22	79 aa		5.1	□□□□□ -1.59
HCG18-238	ENST00000449544	DSCR10	P59022	87 aa		5.1	□□□□□ -1.59
HCG18-238	ENST00000449544	SVEP1	Q4LDE5	3571 aa		5.09	□□□□□ -1.59
HCG18-238	ENST00000449544	TRBV7-7	A0A0K0K1E9	115 aa		5.09	□□□□□ -1.6
HCG18-238	ENST00000449544	IGFL1	Q6UW32	110 aa		5.09	□□□□□ -1.6
HCG18-238	ENST00000449544	C8orf87	E5RJ46	101 aa		5.08	□□□□□ -1.6
HCG18-238	ENST00000449544	HCG22	E2RYF7	251 aa		5.07	□□□□□ -1.6
HCG18-238	ENST00000449544	SEC61G	P60059	68 aa		5.07	□□□□□ -1.6
HCG18-238	ENST00000449544	CD164	Q04900	197 aa		5.07	□□□□□ -1.6
HCG18-238	ENST00000449544		Q8N377	158 aa		5.07	□□□□□ -1.6
HCG18-238	ENST00000449544	SMIM20	Q8N5G0	67 aa		5.06	□□□□□ -1.6
HCG18-238	ENST00000449544	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.06	□□□□□ -1.6
HCG18-238	ENST00000449544	BSN	Q9UPA5	3926 aa		5.06	□□□□□ -1.6
HCG18-238	ENST00000449544		A0A087X002	238 aa		5.05	□□□□□ -1.6
HCG18-238	ENST00000449544	EIF4EBP3	O60516	100 aa	Predicted RBP	5.05	□□□□□ -1.6
HCG18-238	ENST00000449544	TRBV7-4	A0A0J9YYF1	115 aa		5.04	□□□□□ -1.6
HCG18-238	ENST00000449544	SMCP	P49901	116 aa	Predicted RBP	5.03	□□□□□ -1.6
HCG18-238	ENST00000449544	LITAF	Q99732	161 aa		5.03	□□□□□ -1.6
HCG18-238	ENST00000449544		Q8N9L7	120 aa		5.03	□□□□□ -1.6
HCG18-238	ENST00000449544	PRO0461	Q9UI25	63 aa		5.02	□□□□□ -1.61
HCG18-238	ENST00000449544	FAM104A	Q969W3	186 aa		5.02	□□□□□ -1.61
HCG18-238	ENST00000449544	CCDC179	H3BU77	68 aa		5.01	□□□□□ -1.61
HCG18-238	ENST00000449544	SVIP	Q8NHG7	77 aa		5	□□□□□ -1.61
HCG18-238	ENST00000449544	CUBN	O60494	3623 aa		5	□□□□□ -1.61
HCG18-238	ENST00000449544	FAM218A	Q96MZ4	157 aa		5	□□□□□ -1.61
HCG18-238	ENST00000449544	IMUP	Q9GZP8	106 aa		5	□□□□□ -1.61
HCG18-238	ENST00000449544		A0A1B0GW54	56 aa		4.99	□□□□□ -1.61
HCG18-238	ENST00000449544	SPTSSB	Q8NFR3	76 aa		4.99	□□□□□ -1.61
HCG18-238	ENST00000449544	SPRR1A	P35321	89 aa		4.98	□□□□□ -1.61
HCG18-238	ENST00000449544	ATP5EP2	Q5VTU8	51 aa		4.98	□□□□□ -1.61
HCG18-238	ENST00000449544	C5orf47	Q569G3	176 aa		4.98	□□□□□ -1.61
HCG18-238	ENST00000449544	PCOTH	Q58A44	107 aa		4.97	□□□□□ -1.61
HCG18-238	ENST00000449544	SMIM29	Q86T20	159 aa		4.97	□□□□□ -1.61
HCG18-238	ENST00000449544		A0A1B0GVX0	72 aa		4.97	□□□□□ -1.61
HCG18-238	ENST00000449544	LINC00208	Q96KT6	92 aa		4.97	□□□□□ -1.61
HCG18-238	ENST00000449544	LINC00643	Q86TS7	51 aa		4.96	□□□□□ -1.61
HCG18-238	ENST00000449544	MRPL34	Q9BQ48	92 aa	Known RBP	4.96	□□□□□ -1.62
HCG18-238	ENST00000449544		A8MWP4	228 aa		4.95	□□□□□ -1.62
HCG18-238	ENST00000449544		Q6ZQT0	140 aa		4.94	□□□□□ -1.62
HCG18-238	ENST00000449544	C7orf65	Q6ZTY9	151 aa		4.94	□□□□□ -1.62
HCG18-238	ENST00000449544	KRTAP11-1	Q8IUC1	163 aa		4.94	□□□□□ -1.62
HCG18-238	ENST00000449544		Q8NDZ9	215 aa		4.93	□□□□□ -1.62
HCG18-238	ENST00000449544	TP53AIP1	Q9HCN2	124 aa		4.93	□□□□□ -1.62
HCG18-238	ENST00000449544	C8orf17	Q9NRJ1	99 aa		4.93	□□□□□ -1.62
HCG18-238	ENST00000449544	IGLV5-48	A0A075B6I7	105 aa		4.93	□□□□□ -1.62
HCG18-238	ENST00000449544	ATOX1	O00244	68 aa		4.92	□□□□□ -1.62
HCG18-238	ENST00000449544	SERP1	Q9Y6X1	66 aa		4.92	□□□□□ -1.62
HCG18-238	ENST00000449544	CXCL6	P80162	114 aa		4.92	□□□□□ -1.62
HCG18-238	ENST00000449544	SPRR1B	P22528	89 aa		4.92	□□□□□ -1.62
HCG18-238	ENST00000449544	C1orf195	Q5TG92	126 aa		4.91	□□□□□ -1.62
HCG18-238	ENST00000449544		H0Y9P7	68 aa		4.9	□□□□□ -1.62
HCG18-238	ENST00000449544	KRTAP13-2	Q52LG2	175 aa		4.89	□□□□□ -1.63
HCG18-238	ENST00000449544		A0A1W2PNM2	257 aa		4.89	□□□□□ -1.63
HCG18-238	ENST00000449544	LINC00483	Q53H64	154 aa		4.89	□□□□□ -1.63
HCG18-238	ENST00000449544	PRR15	Q8IV56	129 aa		4.88	□□□□□ -1.63
HCG18-238	ENST00000449544		K7EQZ3	153 aa		4.87	□□□□□ -1.63
HCG18-238	ENST00000449544	KRTAP4-5	Q9BYR2	181 aa		4.87	□□□□□ -1.63
HCG18-238	ENST00000449544	LOC110117498	A0A087WWA1	95 aa		4.86	□□□□□ -1.63
HCG18-238	ENST00000449544	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.86	□□□□□ -1.63
HCG18-238	ENST00000449544	LINC00846	Q9NV44	126 aa		4.86	□□□□□ -1.63
HCG18-238	ENST00000449544	NDUFC1	O43677	76 aa		4.86	□□□□□ -1.63
HCG18-238	ENST00000449544	C1orf64	Q8NEQ6	169 aa		4.86	□□□□□ -1.63
HCG18-238	ENST00000449544	RPS29	P62273	56 aa	Known RBP	4.85	□□□□□ -1.63
HCG18-238	ENST00000449544	TMEM254	Q8TBM7	123 aa		4.85	□□□□□ -1.63
HCG18-238	ENST00000449544	AKAP9	Q99996	3911 aa		4.85	□□□□□ -1.63
HCG18-238	ENST00000449544	KRTAP7-1	Q8IUC3	87 aa		4.84	□□□□□ -1.64
HCG18-238	ENST00000449544	TRAV22	A0A0B4J277	110 aa		4.83	□□□□□ -1.64
HCG18-238	ENST00000449544	SPINK7	P58062	85 aa		4.82	□□□□□ -1.64
HCG18-238	ENST00000449544	C20orf197	Q8N268	126 aa		4.82	□□□□□ -1.64
HCG18-238	ENST00000449544	UQCRQ	O14949	82 aa		4.82	□□□□□ -1.64
HCG18-238	ENST00000449544	KRTAP10-8	P60410	259 aa		4.81	□□□□□ -1.64
HCG18-238	ENST00000449544	ZCCHC13	Q8WW36	166 aa	Known RBP	4.81	□□□□□ -1.64
HCG18-238	ENST00000449544	KRTAP1-4	P0C5Y4	121 aa		4.81	□□□□□ -1.64
HCG18-238	ENST00000449544		A0A087WVE0	104 aa		4.8	□□□□□ -1.64
HCG18-238	ENST00000449544	LOC101927531	A0A1B0GV80	90 aa		4.8	□□□□□ -1.64
HCG18-238	ENST00000449544	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.8	□□□□□ -1.64
HCG18-238	ENST00000449544		K7ERS5	55 aa		4.8	□□□□□ -1.64
HCG18-238	ENST00000449544	TPRXL	Q17RH7	258 aa		4.8	□□□□□ -1.64

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