RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 DSCR10P59022 87 aa8.73□□□□□ -1.01
SYNGAP1-204ENST00000449372 CDC42SE1Q9NRR8 79 aa8.73□□□□□ -1.01
SYNGAP1-204ENST00000449372 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
SYNGAP1-204ENST00000449372 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
SYNGAP1-204ENST00000449372 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
SYNGAP1-204ENST00000449372 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
SYNGAP1-204ENST00000449372 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
SYNGAP1-204ENST00000449372 IGLV5-48A0A075B6I7 105 aa8.71□□□□□ -1.02
SYNGAP1-204ENST00000449372 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
SYNGAP1-204ENST00000449372 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
SYNGAP1-204ENST00000449372 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
SYNGAP1-204ENST00000449372 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
SYNGAP1-204ENST00000449372 Q9BRP9 147 aa8.7□□□□□ -1.02
SYNGAP1-204ENST00000449372 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
SYNGAP1-204ENST00000449372 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
SYNGAP1-204ENST00000449372 MOBPQ13875 183 aa8.69□□□□□ -1.02
SYNGAP1-204ENST00000449372 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
SYNGAP1-204ENST00000449372 Q8NBF4 154 aa8.69□□□□□ -1.02
SYNGAP1-204ENST00000449372 SPANXA2-OT1Q8N9U9 137 aa8.68□□□□□ -1.02
SYNGAP1-204ENST00000449372 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
SYNGAP1-204ENST00000449372 Q8N377 158 aa8.68□□□□□ -1.02
SYNGAP1-204ENST00000449372 C7orf33Q8WU49 177 aa8.68□□□□□ -1.02
SYNGAP1-204ENST00000449372 Q6ZRX8 168 aa8.67□□□□□ -1.02
SYNGAP1-204ENST00000449372 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
SYNGAP1-204ENST00000449372 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
SYNGAP1-204ENST00000449372 IGLV5-37A0A075B6J1 123 aa8.64□□□□□ -1.03
SYNGAP1-204ENST00000449372 DEFB131BA0A096LNP1 70 aa8.64□□□□□ -1.03
SYNGAP1-204ENST00000449372 LINC01554Q52M75 96 aa8.64□□□□□ -1.03
SYNGAP1-204ENST00000449372 PRAC1Q96KF2 57 aa8.62□□□□□ -1.03
SYNGAP1-204ENST00000449372 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
SYNGAP1-204ENST00000449372 COA5Q86WW8 74 aa8.61□□□□□ -1.03
SYNGAP1-204ENST00000449372 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
SYNGAP1-204ENST00000449372 H0Y9P7 68 aa8.61□□□□□ -1.03
SYNGAP1-204ENST00000449372 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
SYNGAP1-204ENST00000449372 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
SYNGAP1-204ENST00000449372 LINC00313P59037 77 aa8.6□□□□□ -1.03
SYNGAP1-204ENST00000449372 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
SYNGAP1-204ENST00000449372 DNAH9Q9NYC9 4486 aa8.59□□□□□ -1.03
SYNGAP1-204ENST00000449372 H3BPC8 53 aa8.59□□□□□ -1.03
SYNGAP1-204ENST00000449372 IGLV1-50A0A075B6I6 118 aa8.59□□□□□ -1.03
SYNGAP1-204ENST00000449372 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
SYNGAP1-204ENST00000449372 REG3GQ6UW15 175 aa8.58□□□□□ -1.04
SYNGAP1-204ENST00000449372 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
SYNGAP1-204ENST00000449372 SPAG11AQ6PDA7 123 aa8.57□□□□□ -1.04
SYNGAP1-204ENST00000449372 COL6A5A8TX70 2615 aa8.56□□□□□ -1.04
SYNGAP1-204ENST00000449372 SPRR1AP35321 89 aa8.56□□□□□ -1.04
SYNGAP1-204ENST00000449372 K7EIL1 84 aa8.56□□□□□ -1.04
SYNGAP1-204ENST00000449372 TNP2Q05952 138 aa8.55□□□□□ -1.04
SYNGAP1-204ENST00000449372 SPINK7P58062 85 aa8.55□□□□□ -1.04
SYNGAP1-204ENST00000449372 COL7A1Q02388 2944 aa8.55□□□□□ -1.04
SYNGAP1-204ENST00000449372 LYSTQ99698 3801 aa8.54□□□□□ -1.04
SYNGAP1-204ENST00000449372 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
SYNGAP1-204ENST00000449372 C9orf163Q8N9P6 203 aa8.54□□□□□ -1.04
SYNGAP1-204ENST00000449372 NOTCH1P46531 2555 aa8.53□□□□□ -1.04
SYNGAP1-204ENST00000449372 C14orf177Q52M58 125 aa8.52□□□□□ -1.04
SYNGAP1-204ENST00000449372 LINC00476Q8WZB0 136 aa8.5□□□□□ -1.05
SYNGAP1-204ENST00000449372 IGLV7-46A0A075B6I9 117 aa8.49□□□□□ -1.05
SYNGAP1-204ENST00000449372 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
SYNGAP1-204ENST00000449372 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
SYNGAP1-204ENST00000449372 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
SYNGAP1-204ENST00000449372 CSMD3Q7Z407 3707 aa8.48□□□□□ -1.05
SYNGAP1-204ENST00000449372 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
SYNGAP1-204ENST00000449372 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
SYNGAP1-204ENST00000449372 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
SYNGAP1-204ENST00000449372 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
SYNGAP1-204ENST00000449372 DNAH7Q8WXX0 4024 aa8.46□□□□□ -1.06
SYNGAP1-204ENST00000449372 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
SYNGAP1-204ENST00000449372 RETNLBQ9BQ08 111 aa8.45□□□□□ -1.06
SYNGAP1-204ENST00000449372 A0A087WSZ3 146 aa8.44□□□□□ -1.06
SYNGAP1-204ENST00000449372 IGLV8-61A0A075B6I0 122 aa8.44□□□□□ -1.06
SYNGAP1-204ENST00000449372 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
SYNGAP1-204ENST00000449372 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
SYNGAP1-204ENST00000449372 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
SYNGAP1-204ENST00000449372 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
SYNGAP1-204ENST00000449372 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.06
SYNGAP1-204ENST00000449372 FAM168BA1KXE4 195 aa8.4□□□□□ -1.06
SYNGAP1-204ENST00000449372 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.06
SYNGAP1-204ENST00000449372 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
SYNGAP1-204ENST00000449372 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
SYNGAP1-204ENST00000449372 A8MWP4 228 aa8.38□□□□□ -1.07
SYNGAP1-204ENST00000449372 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
SYNGAP1-204ENST00000449372 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
SYNGAP1-204ENST00000449372 H0Y9J4 135 aa8.37□□□□□ -1.07
SYNGAP1-204ENST00000449372 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
SYNGAP1-204ENST00000449372 MGAM2Q2M2H8 2515 aa8.36□□□□□ -1.07
SYNGAP1-204ENST00000449372 CASC10Q5T4H9 136 aa8.35□□□□□ -1.07
SYNGAP1-204ENST00000449372 PRLHP81277 87 aa8.34□□□□□ -1.07
SYNGAP1-204ENST00000449372 HRES1P13985 223 aa8.34□□□□□ -1.07
SYNGAP1-204ENST00000449372 SPRR1BP22528 89 aa8.33□□□□□ -1.08
SYNGAP1-204ENST00000449372 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
SYNGAP1-204ENST00000449372 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
SYNGAP1-204ENST00000449372 STAB2Q8WWQ8 2551 aa8.31□□□□□ -1.08
SYNGAP1-204ENST00000449372 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
SYNGAP1-204ENST00000449372 KRTAP1-5Q9BYS1 174 aa8.3□□□□□ -1.08
SYNGAP1-204ENST00000449372 APLNQ9ULZ1 77 aa8.3□□□□□ -1.08
SYNGAP1-204ENST00000449372 A0A096LNI7 61 aa8.29□□□□□ -1.08
SYNGAP1-204ENST00000449372 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
SYNGAP1-204ENST00000449372 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
SYNGAP1-204ENST00000449372 RTL8CO15255 209 aa8.26□□□□□ -1.09
SYNGAP1-204ENST00000449372 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms