RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 HERC2O95714 4834 aa8.76□□□□□ -1.01
TNF-208ENST00000449264 A0A1B0GV72 72 aa8.75□□□□□ -1.01
TNF-208ENST00000449264 TMEM256-PLSCR3K7ERE1 68 aa8.75□□□□□ -1.01
TNF-208ENST00000449264 UBE2V1Q13404 147 aa8.75□□□□□ -1.01
TNF-208ENST00000449264 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
TNF-208ENST00000449264 SPRR1BP22528 89 aa8.75□□□□□ -1.01
TNF-208ENST00000449264 H3BT86 120 aa8.74□□□□□ -1.01
TNF-208ENST00000449264 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
TNF-208ENST00000449264 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
TNF-208ENST00000449264 PRO0461Q9UI25 63 aa8.74□□□□□ -1.01
TNF-208ENST00000449264 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
TNF-208ENST00000449264 H3BQ85 93 aa8.73□□□□□ -1.01
TNF-208ENST00000449264 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
TNF-208ENST00000449264 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
TNF-208ENST00000449264 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
TNF-208ENST00000449264 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
TNF-208ENST00000449264 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
TNF-208ENST00000449264 SMIM29Q86T20 159 aa8.72□□□□□ -1.01
TNF-208ENST00000449264 F8WEM9 126 aa8.71□□□□□ -1.02
TNF-208ENST00000449264 NDUFV3P56181 108 aaKnown RBP8.71□□□□□ -1.02
TNF-208ENST00000449264 A0A087X002 238 aa8.7□□□□□ -1.02
TNF-208ENST00000449264 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
TNF-208ENST00000449264 F8W1H4 67 aa8.69□□□□□ -1.02
TNF-208ENST00000449264 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
TNF-208ENST00000449264 CRYGAP11844 174 aa8.68□□□□□ -1.02
TNF-208ENST00000449264 MOBPQ13875 183 aa8.68□□□□□ -1.02
TNF-208ENST00000449264 LRP1Q07954 4544 aaKnown RBP8.67□□□□□ -1.02
TNF-208ENST00000449264 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
TNF-208ENST00000449264 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
TNF-208ENST00000449264 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
TNF-208ENST00000449264 Q8NBF4 154 aa8.64□□□□□ -1.03
TNF-208ENST00000449264 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
TNF-208ENST00000449264 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
TNF-208ENST00000449264 RBM3P98179 157 aaKnown RBP8.63□□□□□ -1.03
TNF-208ENST00000449264 ETDBQ3ZM63 59 aa8.63□□□□□ -1.03
TNF-208ENST00000449264 ABCA13Q86UQ4 5058 aa8.63□□□□□ -1.03
TNF-208ENST00000449264 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
TNF-208ENST00000449264 A0A0G2JQZ4 141 aa8.62□□□□□ -1.03
TNF-208ENST00000449264 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
TNF-208ENST00000449264 C14orf132Q9NPU4 83 aa8.62□□□□□ -1.03
TNF-208ENST00000449264 TEN1Q86WV5 123 aa8.61□□□□□ -1.03
TNF-208ENST00000449264 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
TNF-208ENST00000449264 DSCR8Q96T75 97 aa8.6□□□□□ -1.03
TNF-208ENST00000449264 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
TNF-208ENST00000449264 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.03
TNF-208ENST00000449264 Q6JHZ5 121 aa8.58□□□□□ -1.04
TNF-208ENST00000449264 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
TNF-208ENST00000449264 SSBP3-AS1Q7Z2R9 100 aa8.57□□□□□ -1.04
TNF-208ENST00000449264 VPS25Q9BRG1 176 aa8.56□□□□□ -1.04
TNF-208ENST00000449264 HRCT1Q6UXD1 115 aa8.56□□□□□ -1.04
TNF-208ENST00000449264 TNXBP22105 4242 aa8.55□□□□□ -1.04
TNF-208ENST00000449264 CCKP06307 115 aa8.54□□□□□ -1.04
TNF-208ENST00000449264 LOC110117498A0A087WWA1 95 aa8.53□□□□□ -1.04
TNF-208ENST00000449264 Q6ZQT0 140 aa8.53□□□□□ -1.04
TNF-208ENST00000449264 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
TNF-208ENST00000449264 OXTP01178 125 aa8.52□□□□□ -1.05
TNF-208ENST00000449264 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
TNF-208ENST00000449264 PDE6GP18545 87 aa8.51□□□□□ -1.05
TNF-208ENST00000449264 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
TNF-208ENST00000449264 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
TNF-208ENST00000449264 SVIPQ8NHG7 77 aa8.49□□□□□ -1.05
TNF-208ENST00000449264 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
TNF-208ENST00000449264 TRBV7-7A0A0K0K1E9 115 aa8.46□□□□□ -1.05
TNF-208ENST00000449264 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.06
TNF-208ENST00000449264 A0A087WSZ3 146 aa8.46□□□□□ -1.06
TNF-208ENST00000449264 CD164Q04900 197 aa8.46□□□□□ -1.06
TNF-208ENST00000449264 Q6Q795 121 aa8.46□□□□□ -1.06
TNF-208ENST00000449264 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
TNF-208ENST00000449264 SPINK1P00995 79 aa8.43□□□□□ -1.06
TNF-208ENST00000449264 LIMD2Q9BT23 127 aa8.4□□□□□ -1.06
TNF-208ENST00000449264 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.06
TNF-208ENST00000449264 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
TNF-208ENST00000449264 J3QR89 54 aa8.38□□□□□ -1.07
TNF-208ENST00000449264 A0A1B0GW54 56 aa8.37□□□□□ -1.07
TNF-208ENST00000449264 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
TNF-208ENST00000449264 LINC00846Q9NV44 126 aa8.37□□□□□ -1.07
TNF-208ENST00000449264 FAM240AA0A1B0GVK7 77 aa8.34□□□□□ -1.07
TNF-208ENST00000449264 K7ERU9 68 aa8.34□□□□□ -1.08
TNF-208ENST00000449264 Q5XG85 94 aa8.34□□□□□ -1.08
TNF-208ENST00000449264 RETNLBQ9BQ08 111 aa8.34□□□□□ -1.08
TNF-208ENST00000449264 ACYP1P07311 99 aa8.33□□□□□ -1.08
TNF-208ENST00000449264 NREPQ16612 68 aa8.33□□□□□ -1.08
TNF-208ENST00000449264 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
TNF-208ENST00000449264 DEFB116Q30KQ4 102 aa8.31□□□□□ -1.08
TNF-208ENST00000449264 Q6ZVQ6 151 aa8.31□□□□□ -1.08
TNF-208ENST00000449264 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
TNF-208ENST00000449264 C1orf195Q5TG92 126 aa8.3□□□□□ -1.08
TNF-208ENST00000449264 Q96NJ1 140 aa8.29□□□□□ -1.08
TNF-208ENST00000449264 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
TNF-208ENST00000449264 SIGMAR1Q99720 223 aa8.27□□□□□ -1.08
TNF-208ENST00000449264 IGKV4-1P06312 121 aa8.26□□□□□ -1.09
TNF-208ENST00000449264 BPY2O14599 106 aa8.24□□□□□ -1.09
TNF-208ENST00000449264 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
TNF-208ENST00000449264 J3KT08 172 aa8.21□□□□□ -1.1
TNF-208ENST00000449264 PRR4Q16378 134 aa8.21□□□□□ -1.1
TNF-208ENST00000449264 HERC1Q15751 4861 aa8.2□□□□□ -1.1
TNF-208ENST00000449264 IGKV3D-7A0A0C4DH55 119 aa8.19□□□□□ -1.1
TNF-208ENST00000449264 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
TNF-208ENST00000449264 DSCR10P59022 87 aa8.18□□□□□ -1.1
TNF-208ENST00000449264 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms