RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.04
SHMT2-203ENST00000449049 HSPG2P98160 4391 aa8.58□□□□□ -1.04
SHMT2-203ENST00000449049 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
SHMT2-203ENST00000449049 ZNF861PO60384 105 aa8.58□□□□□ -1.04
SHMT2-203ENST00000449049 TRACP01848 142 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 LINC00575Q6W349 94 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 INAFM2P0DMQ5 153 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 TMEM258P61165 79 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 KRTAP17-1Q9BYP8 105 aa8.57□□□□□ -1.04
SHMT2-203ENST00000449049 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
SHMT2-203ENST00000449049 Q5VSD8 79 aa8.56□□□□□ -1.04
SHMT2-203ENST00000449049 Q5XG85 94 aa8.56□□□□□ -1.04
SHMT2-203ENST00000449049 Q8N1X5 172 aa8.56□□□□□ -1.04
SHMT2-203ENST00000449049 FAM218AQ96MZ4 157 aa8.56□□□□□ -1.04
SHMT2-203ENST00000449049 DHRS4-AS1Q9P1J3 65 aa8.56□□□□□ -1.04
SHMT2-203ENST00000449049 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
SHMT2-203ENST00000449049 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
SHMT2-203ENST00000449049 PRO0628Q9UI54 55 aa8.54□□□□□ -1.04
SHMT2-203ENST00000449049 hADV29S1A0JD25 119 aa8.53□□□□□ -1.04
SHMT2-203ENST00000449049 ERC2-IT1O76042 136 aa8.53□□□□□ -1.04
SHMT2-203ENST00000449049 FAT1Q14517 4588 aa8.52□□□□□ -1.05
SHMT2-203ENST00000449049 OXTP01178 125 aa8.51□□□□□ -1.05
SHMT2-203ENST00000449049 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
SHMT2-203ENST00000449049 VPS13BQ7Z7G8 4022 aa8.5□□□□□ -1.05
SHMT2-203ENST00000449049 ATOX1O00244 68 aa8.5□□□□□ -1.05
SHMT2-203ENST00000449049 HIST1H4AP62805 103 aaKnown RBP8.5□□□□□ -1.05
SHMT2-203ENST00000449049 SEC61GP60059 68 aa8.48□□□□□ -1.05
SHMT2-203ENST00000449049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-203ENST00000449049 Q6ZQY7 126 aa8.47□□□□□ -1.05
SHMT2-203ENST00000449049 ST20-AS1Q8NBB2 130 aa8.47□□□□□ -1.05
SHMT2-203ENST00000449049 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
SHMT2-203ENST00000449049 DSCR8Q96T75 97 aa8.46□□□□□ -1.06
SHMT2-203ENST00000449049 ZNF706Q9Y5V0 76 aaPredicted RBP8.46□□□□□ -1.06
SHMT2-203ENST00000449049 DNAL4O96015 105 aa8.45□□□□□ -1.06
SHMT2-203ENST00000449049 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
SHMT2-203ENST00000449049 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
SHMT2-203ENST00000449049 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-203ENST00000449049 SPRR1BP22528 89 aa8.43□□□□□ -1.06
SHMT2-203ENST00000449049 OBSCN-AS1Q96MR7 158 aa8.43□□□□□ -1.06
SHMT2-203ENST00000449049 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
SHMT2-203ENST00000449049 HERC2O95714 4834 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 Q6JHZ5 121 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 Q8N377 158 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 SERP2Q8N6R1 65 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 ORMDL1Q9P0S3 153 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 V9GYY9 64 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
SHMT2-203ENST00000449049 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
SHMT2-203ENST00000449049 GHRHP01286 108 aa8.39□□□□□ -1.07
SHMT2-203ENST00000449049 H3BQ85 93 aa8.39□□□□□ -1.07
SHMT2-203ENST00000449049 C14orf132Q9NPU4 83 aa8.38□□□□□ -1.07
SHMT2-203ENST00000449049 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
SHMT2-203ENST00000449049 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
SHMT2-203ENST00000449049 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
SHMT2-203ENST00000449049 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
SHMT2-203ENST00000449049 IGKV3D-7A0A0C4DH55 119 aa8.36□□□□□ -1.07
SHMT2-203ENST00000449049 TMEM256-PLSCR3K7ERE1 68 aa8.36□□□□□ -1.07
SHMT2-203ENST00000449049 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
SHMT2-203ENST00000449049 LAMTOR3Q9UHA4 124 aa8.34□□□□□ -1.07
SHMT2-203ENST00000449049 A0A087X002 238 aa8.33□□□□□ -1.08
SHMT2-203ENST00000449049 A0A087WVE0 104 aa8.32□□□□□ -1.08
SHMT2-203ENST00000449049 CCKP06307 115 aa8.32□□□□□ -1.08
SHMT2-203ENST00000449049 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
SHMT2-203ENST00000449049 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
SHMT2-203ENST00000449049 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
SHMT2-203ENST00000449049 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
SHMT2-203ENST00000449049 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
SHMT2-203ENST00000449049 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
SHMT2-203ENST00000449049 F8WEM9 126 aa8.29□□□□□ -1.08
SHMT2-203ENST00000449049 PRR26Q8N8Z3 221 aa8.29□□□□□ -1.08
SHMT2-203ENST00000449049 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
SHMT2-203ENST00000449049 MOBPQ13875 183 aa8.27□□□□□ -1.08
SHMT2-203ENST00000449049 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.08
SHMT2-203ENST00000449049 Q8NBF4 154 aa8.27□□□□□ -1.08
SHMT2-203ENST00000449049 JMJD7-PLA2G4BH0Y9G9 81 aa8.27□□□□□ -1.09
SHMT2-203ENST00000449049 SMIM26A0A096LP01 95 aa8.24□□□□□ -1.09
SHMT2-203ENST00000449049 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
SHMT2-203ENST00000449049 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
SHMT2-203ENST00000449049 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
SHMT2-203ENST00000449049 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
SHMT2-203ENST00000449049 RBM3P98179 157 aaKnown RBP8.23□□□□□ -1.09
SHMT2-203ENST00000449049 FAT3Q8TDW7 4589 aa8.22□□□□□ -1.09
SHMT2-203ENST00000449049 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.09
SHMT2-203ENST00000449049 IGFL1Q6UW32 110 aa8.21□□□□□ -1.09
SHMT2-203ENST00000449049 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
SHMT2-203ENST00000449049 MT1HL1P0DM35 61 aa8.2□□□□□ -1.1
SHMT2-203ENST00000449049 FP248Q71RG6 208 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-203ENST00000449049 LRP1Q07954 4544 aaKnown RBP8.2□□□□□ -1.1
SHMT2-203ENST00000449049 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
SHMT2-203ENST00000449049 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
SHMT2-203ENST00000449049 UBL5Q9BZL1 73 aa8.19□□□□□ -1.1
SHMT2-203ENST00000449049 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
SHMT2-203ENST00000449049 LOC110117498A0A087WWA1 95 aa8.17□□□□□ -1.1
SHMT2-203ENST00000449049 H7BZZ5 65 aa8.17□□□□□ -1.1
SHMT2-203ENST00000449049 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
SHMT2-203ENST00000449049 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms