RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 Q75L30 129 aa6.21□□□□□ -1.41
SMC6-207ENST00000448223 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
SMC6-207ENST00000448223 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
SMC6-207ENST00000448223 LINC00313P59037 77 aa6.2□□□□□ -1.42
SMC6-207ENST00000448223 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
SMC6-207ENST00000448223 VPS13CQ709C8 3753 aa6.19□□□□□ -1.42
SMC6-207ENST00000448223 ZFHX3Q15911 3703 aa6.19□□□□□ -1.42
SMC6-207ENST00000448223 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
SMC6-207ENST00000448223 M0R2N4 97 aa6.19□□□□□ -1.42
SMC6-207ENST00000448223 STAB1Q9NY15 2570 aa6.17□□□□□ -1.42
SMC6-207ENST00000448223 LINC00588Q9Y4M8 146 aa6.17□□□□□ -1.42
SMC6-207ENST00000448223 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
SMC6-207ENST00000448223 IGLV1-51P01701 117 aa6.17□□□□□ -1.42
SMC6-207ENST00000448223 FAM229BQ4G0N7 80 aa6.16□□□□□ -1.42
SMC6-207ENST00000448223 BAHCC1Q9P281 2608 aa6.16□□□□□ -1.42
SMC6-207ENST00000448223 Q6ZRP5 223 aa6.15□□□□□ -1.42
SMC6-207ENST00000448223 OCR1Q9BZK8 76 aa6.15□□□□□ -1.43
SMC6-207ENST00000448223 C16orf90A8MZG2 172 aa6.15□□□□□ -1.43
SMC6-207ENST00000448223 CR1P17927 2039 aa6.14□□□□□ -1.43
SMC6-207ENST00000448223 INAFM1C9JVW0 142 aa6.14□□□□□ -1.43
SMC6-207ENST00000448223 SPACA4Q8TDM5 124 aa6.14□□□□□ -1.43
SMC6-207ENST00000448223 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
SMC6-207ENST00000448223 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
SMC6-207ENST00000448223 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
SMC6-207ENST00000448223 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
SMC6-207ENST00000448223 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
SMC6-207ENST00000448223 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
SMC6-207ENST00000448223 A0A096LNT2 108 aa6.12□□□□□ -1.43
SMC6-207ENST00000448223 GIG44P09565 113 aaPredicted RBP6.11□□□□□ -1.43
SMC6-207ENST00000448223 PRR26Q8N8Z3 221 aa6.11□□□□□ -1.43
SMC6-207ENST00000448223 GVQW2A0A096LPI5 108 aaPredicted RBP6.11□□□□□ -1.43
SMC6-207ENST00000448223 Q5VV11 94 aa6.11□□□□□ -1.43
SMC6-207ENST00000448223 NUPR2A6NF83 97 aa6.1□□□□□ -1.43
SMC6-207ENST00000448223 J3QKU1 62 aa6.1□□□□□ -1.43
SMC6-207ENST00000448223 OBSCN-AS1Q96MR7 158 aa6.1□□□□□ -1.43
SMC6-207ENST00000448223 OXTP01178 125 aa6.1□□□□□ -1.43
SMC6-207ENST00000448223 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
SMC6-207ENST00000448223 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
SMC6-207ENST00000448223 NSD1Q96L73 2696 aaPredicted RBP6.09□□□□□ -1.43
SMC6-207ENST00000448223 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
SMC6-207ENST00000448223 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.44
SMC6-207ENST00000448223 Q8N377 158 aa6.07□□□□□ -1.44
SMC6-207ENST00000448223 A0A1B0GVX0 72 aa6.07□□□□□ -1.44
SMC6-207ENST00000448223 KCNQ1DNQ9H478 68 aa6.07□□□□□ -1.44
SMC6-207ENST00000448223 Q96NJ1 140 aa6.06□□□□□ -1.44
SMC6-207ENST00000448223 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
SMC6-207ENST00000448223 VWFP04275 2813 aa6.05□□□□□ -1.44
SMC6-207ENST00000448223 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
SMC6-207ENST00000448223 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
SMC6-207ENST00000448223 PDZD2O15018 2839 aa6.05□□□□□ -1.44
SMC6-207ENST00000448223 A0A0D9SG42 100 aa6.04□□□□□ -1.44
SMC6-207ENST00000448223 CSNK1G2-AS1Q8NCQ2 148 aa6.03□□□□□ -1.44
SMC6-207ENST00000448223 A0A1W2PNM2 257 aa6.02□□□□□ -1.44
SMC6-207ENST00000448223 C19orf73Q9NVV2 129 aa6.02□□□□□ -1.45
SMC6-207ENST00000448223 IGLV1-50A0A075B6I6 118 aa6.02□□□□□ -1.45
SMC6-207ENST00000448223 LY6G6CO95867 125 aa6.01□□□□□ -1.45
SMC6-207ENST00000448223 SPINK7P58062 85 aa6.01□□□□□ -1.45
SMC6-207ENST00000448223 DSCR10P59022 87 aa6.01□□□□□ -1.45
SMC6-207ENST00000448223 CHTF8P0CG12 524 aa6□□□□□ -1.45
SMC6-207ENST00000448223 NBPF19A0A087WUL8 3843 aa5.99□□□□□ -1.45
SMC6-207ENST00000448223 A0A0G2JQZ4 141 aa5.99□□□□□ -1.45
SMC6-207ENST00000448223 A0A1W2PNN7 141 aa5.99□□□□□ -1.45
SMC6-207ENST00000448223 TENM1Q9UKZ4 2725 aa5.99□□□□□ -1.45
SMC6-207ENST00000448223 KRTAP10-3P60369 221 aa5.98□□□□□ -1.45
SMC6-207ENST00000448223 KRTAP1-3Q8IUG1 177 aa5.98□□□□□ -1.45
SMC6-207ENST00000448223 A0A1B0GU33 70 aa5.98□□□□□ -1.45
SMC6-207ENST00000448223 FAM168BA1KXE4 195 aa5.97□□□□□ -1.45
SMC6-207ENST00000448223 Q8NDZ9 215 aa5.97□□□□□ -1.45
SMC6-207ENST00000448223 RTL8CO15255 209 aa5.96□□□□□ -1.46
SMC6-207ENST00000448223 IGLV5-48A0A075B6I7 105 aa5.96□□□□□ -1.46
SMC6-207ENST00000448223 Q8NAQ8 132 aa5.96□□□□□ -1.46
SMC6-207ENST00000448223 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
SMC6-207ENST00000448223 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
SMC6-207ENST00000448223 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
SMC6-207ENST00000448223 C16orf95Q9H693 158 aa5.95□□□□□ -1.46
SMC6-207ENST00000448223 H3BNG1 76 aa5.94□□□□□ -1.46
SMC6-207ENST00000448223 TLX1NBP0CAT3 122 aa5.93□□□□□ -1.46
SMC6-207ENST00000448223 Q8N1X5 172 aa5.93□□□□□ -1.46
SMC6-207ENST00000448223 PKD1L1Q8TDX9 2849 aa5.93□□□□□ -1.46
SMC6-207ENST00000448223 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
SMC6-207ENST00000448223 KRTAP1-1Q07627 177 aa5.91□□□□□ -1.46
SMC6-207ENST00000448223 HRES1P13985 223 aa5.9□□□□□ -1.46
SMC6-207ENST00000448223 OTOGQ6ZRI0 2925 aa5.9□□□□□ -1.46
SMC6-207ENST00000448223 TENM4Q6N022 2769 aa5.9□□□□□ -1.47
SMC6-207ENST00000448223 TENM3Q9P273 2699 aa5.89□□□□□ -1.47
SMC6-207ENST00000448223 KMT2BQ9UMN6 2715 aaPredicted RBP5.88□□□□□ -1.47
SMC6-207ENST00000448223 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
SMC6-207ENST00000448223 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
SMC6-207ENST00000448223 STAB2Q8WWQ8 2551 aa5.88□□□□□ -1.47
SMC6-207ENST00000448223 LINC00612Q8N6U2 182 aa5.87□□□□□ -1.47
SMC6-207ENST00000448223 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
SMC6-207ENST00000448223 PRR34Q9NV39 138 aa5.85□□□□□ -1.47
SMC6-207ENST00000448223 A6NN06 94 aa5.85□□□□□ -1.47
SMC6-207ENST00000448223 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
SMC6-207ENST00000448223 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
SMC6-207ENST00000448223 CASC10Q5T4H9 136 aa5.82□□□□□ -1.48
SMC6-207ENST00000448223 ZNF469Q96JG9 3925 aaPredicted RBP5.82□□□□□ -1.48
SMC6-207ENST00000448223 DNAH10OSP0CZ25 163 aa5.81□□□□□ -1.48
SMC6-207ENST00000448223 ROMO1P60602 79 aa5.81□□□□□ -1.48
SMC6-207ENST00000448223 ZNF861PO60384 105 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms