RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 BAGE3Q86Y29 109 aa2.95□□□□□ -1.94
USP49-205ENST00000448078 Q8NDZ9 215 aa2.95□□□□□ -1.94
USP49-205ENST00000448078 TRAV23DV6A0A075B6W5 121 aa2.94□□□□□ -1.94
USP49-205ENST00000448078 ZNF73O43830 326 aaPredicted RBP2.94□□□□□ -1.94
USP49-205ENST00000448078 LGALS3P17931 250 aaKnown RBP2.94□□□□□ -1.94
USP49-205ENST00000448078 SPANXB1Q9NS25 103 aaPredicted RBP2.94□□□□□ -1.94
USP49-205ENST00000448078 RBM12B-AS1Q9P1G2 102 aa2.94□□□□□ -1.94
USP49-205ENST00000448078 TEX49A0A1B0GTD5 131 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 SPRR1BP22528 89 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 RHEBQ15382 184 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 TCTE3Q8IZS6 198 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 ST20-AS1Q8NBB2 130 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 DEFB105AQ8NG35 78 aa2.93□□□□□ -1.94
USP49-205ENST00000448078 MT2AP02795 61 aa2.92□□□□□ -1.94
USP49-205ENST00000448078 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
USP49-205ENST00000448078 C20orf166-AS1Q96NR2 134 aa2.92□□□□□ -1.94
USP49-205ENST00000448078 CHTOPQ9Y3Y2 248 aaKnown RBP2.92□□□□□ -1.94
USP49-205ENST00000448078 LINC01546A6NGU7 62 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 NDUFC2O95298 119 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 HBDP02042 147 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 NMUP48645 174 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 COX19Q49B96 90 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 OR13C6PQ8NH95 151 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 OBSCN-AS1Q96MR7 158 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
USP49-205ENST00000448078 LOC107984156A0A0G2JMH3 177 aa2.9□□□□□ -1.95
USP49-205ENST00000448078 C11orf86A6NJI1 115 aa2.9□□□□□ -1.95
USP49-205ENST00000448078 F8WEM9 126 aa2.9□□□□□ -1.95
USP49-205ENST00000448078 ARL17AQ8IVW1 177 aa2.9□□□□□ -1.95
USP49-205ENST00000448078 Q96NJ1 140 aa2.9□□□□□ -1.95
USP49-205ENST00000448078 TMEM223A0PJW6 202 aa2.89□□□□□ -1.95
USP49-205ENST00000448078 ZNF815PA8K554 130 aa2.89□□□□□ -1.95
USP49-205ENST00000448078 S100PP25815 95 aa2.89□□□□□ -1.95
USP49-205ENST00000448078 HERVK_113P61574 105 aa2.89□□□□□ -1.95
USP49-205ENST00000448078 FABP9Q0Z7S8 132 aa2.89□□□□□ -1.95
USP49-205ENST00000448078 SEC11CQ9BY50 192 aa2.89□□□□□ -1.95
USP49-205ENST00000448078 SNAPINO95295 136 aa2.88□□□□□ -1.95
USP49-205ENST00000448078 LINC00614P0C842 121 aa2.88□□□□□ -1.95
USP49-205ENST00000448078 COX7BP24311 80 aa2.88□□□□□ -1.95
USP49-205ENST00000448078 C9JQL5 133 aa2.87□□□□□ -1.95
USP49-205ENST00000448078 MT1FP04733 61 aa2.87□□□□□ -1.95
USP49-205ENST00000448078 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
USP49-205ENST00000448078 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
USP49-205ENST00000448078 NHP2Q9NX24 153 aaKnown RBP2.86□□□□□ -1.95
USP49-205ENST00000448078 TRBV7-6A0A0J9YX20 115 aa2.85□□□□□ -1.95
USP49-205ENST00000448078 LST1O00453 97 aa2.85□□□□□ -1.95
USP49-205ENST00000448078 Q6JHZ5 121 aa2.85□□□□□ -1.95
USP49-205ENST00000448078 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
USP49-205ENST00000448078 A0A0G2JQZ4 141 aa2.84□□□□□ -1.95
USP49-205ENST00000448078 LEPROTO15243 131 aa2.84□□□□□ -1.95
USP49-205ENST00000448078 IGFL1Q6UW32 110 aa2.84□□□□□ -1.95
USP49-205ENST00000448078 IFI27L1Q96BM0 104 aa2.84□□□□□ -1.95
USP49-205ENST00000448078 SPANXDQ9BXN6 97 aa2.84□□□□□ -1.95
USP49-205ENST00000448078 NEBP20929 6669 aa2.83□□□□□ -1.96
USP49-205ENST00000448078 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
USP49-205ENST00000448078 A8MWP4 228 aa2.83□□□□□ -1.96
USP49-205ENST00000448078 J3QQQ9 107 aa2.83□□□□□ -1.96
USP49-205ENST00000448078 ELOF1P60002 83 aaKnown RBP2.83□□□□□ -1.96
USP49-205ENST00000448078 VAMP3Q15836 100 aa2.83□□□□□ -1.96
USP49-205ENST00000448078 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
USP49-205ENST00000448078 SPANXCQ9NY87 97 aa2.83□□□□□ -1.96
USP49-205ENST00000448078 TRAV13-2A0A0B4J235 113 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 PLNP26678 52 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 NPC2P61916 151 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 PMCHL1Q16048 86 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 SLC7A5P1Q8MH63 180 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 COPS9Q8WXC6 57 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 SS18L2Q9UHA2 77 aa2.82□□□□□ -1.96
USP49-205ENST00000448078 IGLV5-48A0A075B6I7 105 aa2.81□□□□□ -1.96
USP49-205ENST00000448078 TRBV7-7A0A0K0K1E9 115 aa2.81□□□□□ -1.96
USP49-205ENST00000448078 A8MUU9 505 aa2.81□□□□□ -1.96
USP49-205ENST00000448078 TRAPPC1Q9Y5R8 145 aa2.81□□□□□ -1.96
USP49-205ENST00000448078 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
USP49-205ENST00000448078 CLEC2BQ92478 149 aa2.8□□□□□ -1.96
USP49-205ENST00000448078 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
USP49-205ENST00000448078 A0A096LNJ9 63 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 A6NDN8 102 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 H0Y8G0 127 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 OCIAD2Q56VL3 154 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 SOSTDC1Q6X4U4 206 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 C18orf32Q8TCD1 76 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 CHCHD1Q96BP2 118 aaKnown RBP2.79□□□□□ -1.96
USP49-205ENST00000448078 SNHG12Q9BXW3 62 aa2.79□□□□□ -1.96
USP49-205ENST00000448078 DPM2O94777 84 aa2.78□□□□□ -1.96
USP49-205ENST00000448078 LINC00308Q8TCZ7 52 aa2.78□□□□□ -1.96
USP49-205ENST00000448078 A6NN06 94 aa2.77□□□□□ -1.97
USP49-205ENST00000448078 HSBP1O75506 76 aa2.77□□□□□ -1.97
USP49-205ENST00000448078 SNCGO76070 127 aa2.77□□□□□ -1.97
USP49-205ENST00000448078 LINC00313P59037 77 aa2.77□□□□□ -1.97
USP49-205ENST00000448078 HIST1H4GQ99525 98 aa2.77□□□□□ -1.97
USP49-205ENST00000448078 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
USP49-205ENST00000448078 TIMM17BO60830 172 aa2.76□□□□□ -1.97
USP49-205ENST00000448078 HSPB8Q9UJY1 196 aa2.76□□□□□ -1.97
USP49-205ENST00000448078 LEPROTL1O95214 131 aa2.75□□□□□ -1.97
USP49-205ENST00000448078 IGKCP01834 107 aa2.75□□□□□ -1.97
USP49-205ENST00000448078 TSPEAR-AS2P59090 65 aa2.75□□□□□ -1.97
USP49-205ENST00000448078 HRES1P13985 223 aa2.74□□□□□ -1.97
USP49-205ENST00000448078 PPDPFLQ8WWR9 84 aa2.74□□□□□ -1.97
USP49-205ENST00000448078 C12orf57Q99622 126 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms