RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
SREBF1-207ENST00000447641 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
SREBF1-207ENST00000447641 FAM218AQ96MZ4 157 aa8.48□□□□□ -1.05
SREBF1-207ENST00000447641 B5MCH6 92 aa8.47□□□□□ -1.05
SREBF1-207ENST00000447641 J3QR89 54 aa8.47□□□□□ -1.05
SREBF1-207ENST00000447641 BAALC-AS2P0C853 105 aa8.47□□□□□ -1.05
SREBF1-207ENST00000447641 UBE2AP49459 152 aa8.46□□□□□ -1.06
SREBF1-207ENST00000447641 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
SREBF1-207ENST00000447641 PRO0461Q9UI25 63 aa8.46□□□□□ -1.06
SREBF1-207ENST00000447641 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
SREBF1-207ENST00000447641 PRLHP81277 87 aa8.44□□□□□ -1.06
SREBF1-207ENST00000447641 TEN1Q86WV5 123 aa8.44□□□□□ -1.06
SREBF1-207ENST00000447641 JMJD7-PLA2G4BH0Y9G9 81 aa8.43□□□□□ -1.06
SREBF1-207ENST00000447641 Q6ZQY7 126 aa8.42□□□□□ -1.06
SREBF1-207ENST00000447641 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
SREBF1-207ENST00000447641 MTURNQ8N3F0 131 aa8.41□□□□□ -1.06
SREBF1-207ENST00000447641 K7ERU9 68 aa8.4□□□□□ -1.06
SREBF1-207ENST00000447641 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
SREBF1-207ENST00000447641 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
SREBF1-207ENST00000447641 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
SREBF1-207ENST00000447641 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
SREBF1-207ENST00000447641 PDE6GP18545 87 aa8.37□□□□□ -1.07
SREBF1-207ENST00000447641 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
SREBF1-207ENST00000447641 A0A087X002 238 aa8.36□□□□□ -1.07
SREBF1-207ENST00000447641 TEX49A0A1B0GTD5 131 aa8.36□□□□□ -1.07
SREBF1-207ENST00000447641 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
SREBF1-207ENST00000447641 SMCR5Q8TEV8 140 aa8.36□□□□□ -1.07
SREBF1-207ENST00000447641 Q9BRP9 147 aa8.36□□□□□ -1.07
SREBF1-207ENST00000447641 MUC2Q02817 5179 aa8.35□□□□□ -1.07
SREBF1-207ENST00000447641 F8WEM9 126 aa8.35□□□□□ -1.07
SREBF1-207ENST00000447641 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
SREBF1-207ENST00000447641 IGLV5-48A0A075B6I7 105 aa8.34□□□□□ -1.07
SREBF1-207ENST00000447641 CRYGAP11844 174 aa8.34□□□□□ -1.07
SREBF1-207ENST00000447641 SPRR4Q96PI1 79 aa8.34□□□□□ -1.07
SREBF1-207ENST00000447641 ERC2-IT1O76042 136 aa8.33□□□□□ -1.08
SREBF1-207ENST00000447641 RBM3P98179 157 aaKnown RBP8.33□□□□□ -1.08
SREBF1-207ENST00000447641 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
SREBF1-207ENST00000447641 DSCR8Q96T75 97 aa8.33□□□□□ -1.08
SREBF1-207ENST00000447641 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
SREBF1-207ENST00000447641 NDUFV3P56181 108 aaKnown RBP8.31□□□□□ -1.08
SREBF1-207ENST00000447641 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
SREBF1-207ENST00000447641 ACYP1P07311 99 aa8.3□□□□□ -1.08
SREBF1-207ENST00000447641 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
SREBF1-207ENST00000447641 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
SREBF1-207ENST00000447641 SPRR1BP22528 89 aa8.28□□□□□ -1.08
SREBF1-207ENST00000447641 Q8N377 158 aa8.28□□□□□ -1.08
SREBF1-207ENST00000447641 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
SREBF1-207ENST00000447641 LOC110117498A0A087WWA1 95 aa8.27□□□□□ -1.09
SREBF1-207ENST00000447641 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
SREBF1-207ENST00000447641 ST20-AS1Q8NBB2 130 aa8.25□□□□□ -1.09
SREBF1-207ENST00000447641 A0A1B0GW54 56 aa8.24□□□□□ -1.09
SREBF1-207ENST00000447641 LINC01547P58512 204 aaPredicted RBP8.24□□□□□ -1.09
SREBF1-207ENST00000447641 Q6JHZ5 121 aa8.24□□□□□ -1.09
SREBF1-207ENST00000447641 GAGE2AQ6NT46 116 aa8.24□□□□□ -1.09
SREBF1-207ENST00000447641 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
SREBF1-207ENST00000447641 C14orf132Q9NPU4 83 aa8.24□□□□□ -1.09
SREBF1-207ENST00000447641 CCKP06307 115 aa8.22□□□□□ -1.09
SREBF1-207ENST00000447641 TRBV7-4A0A0J9YYF1 115 aa8.2□□□□□ -1.1
SREBF1-207ENST00000447641 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
SREBF1-207ENST00000447641 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
SREBF1-207ENST00000447641 Q6ZQT0 140 aa8.19□□□□□ -1.1
SREBF1-207ENST00000447641 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
SREBF1-207ENST00000447641 A0A1B0GV72 72 aa8.18□□□□□ -1.1
SREBF1-207ENST00000447641 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
SREBF1-207ENST00000447641 SMIM29Q86T20 159 aa8.16□□□□□ -1.1
SREBF1-207ENST00000447641 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.1
SREBF1-207ENST00000447641 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
SREBF1-207ENST00000447641 Q8NBF4 154 aa8.15□□□□□ -1.1
SREBF1-207ENST00000447641 VPS25Q9BRG1 176 aa8.15□□□□□ -1.1
SREBF1-207ENST00000447641 UBL5Q9BZL1 73 aa8.15□□□□□ -1.1
SREBF1-207ENST00000447641 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
SREBF1-207ENST00000447641 MOBPQ13875 183 aa8.13□□□□□ -1.11
SREBF1-207ENST00000447641 Q6Q795 121 aa8.1□□□□□ -1.11
SREBF1-207ENST00000447641 SPINK1P00995 79 aa8.09□□□□□ -1.11
SREBF1-207ENST00000447641 ATP5EP2Q5VTU8 51 aa8.09□□□□□ -1.11
SREBF1-207ENST00000447641 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
SREBF1-207ENST00000447641 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
SREBF1-207ENST00000447641 C4orf48Q5BLP8 95 aa8.08□□□□□ -1.12
SREBF1-207ENST00000447641 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
SREBF1-207ENST00000447641 SS18L2Q9UHA2 77 aa8.06□□□□□ -1.12
SREBF1-207ENST00000447641 CD164Q04900 197 aa8.05□□□□□ -1.12
SREBF1-207ENST00000447641 PRR4Q16378 134 aa8.05□□□□□ -1.12
SREBF1-207ENST00000447641 NREPQ16612 68 aa8.05□□□□□ -1.12
SREBF1-207ENST00000447641 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
SREBF1-207ENST00000447641 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
SREBF1-207ENST00000447641 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
SREBF1-207ENST00000447641 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
SREBF1-207ENST00000447641 SIGMAR1Q99720 223 aa8.04□□□□□ -1.12
SREBF1-207ENST00000447641 TRBV7-7A0A0K0K1E9 115 aa8.03□□□□□ -1.12
SREBF1-207ENST00000447641 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
SREBF1-207ENST00000447641 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
SREBF1-207ENST00000447641 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
SREBF1-207ENST00000447641 Q6ZVQ6 151 aa8□□□□□ -1.13
SREBF1-207ENST00000447641 IMUPQ9GZP8 106 aa8□□□□□ -1.13
SREBF1-207ENST00000447641 CXCL6P80162 114 aa7.99□□□□□ -1.13
SREBF1-207ENST00000447641 A0A087WSZ3 146 aa7.98□□□□□ -1.13
SREBF1-207ENST00000447641 FP248Q71RG6 208 aaPredicted RBP7.98□□□□□ -1.13
SREBF1-207ENST00000447641 J3KT08 172 aa7.97□□□□□ -1.13
SREBF1-207ENST00000447641 BPY2O14599 106 aa7.97□□□□□ -1.13
SREBF1-207ENST00000447641 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms