RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 REG3GQ6UW15 175 aa8.82□□□□□ -1
VPS52-212ENST00000445902 CASC2Q6XLA1 102 aa8.81□□□□□ -1
VPS52-212ENST00000445902 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
VPS52-212ENST00000445902 FBN1P35555 2871 aaKnown RBP8.8□□□□□ -1
VPS52-212ENST00000445902 TLX1NBP0CAT3 122 aa8.8□□□□□ -1
VPS52-212ENST00000445902 UBE2AP49459 152 aa8.8□□□□□ -1
VPS52-212ENST00000445902 KRTAP29-1A8MX34 341 aaPredicted RBP8.79□□□□□ -1
VPS52-212ENST00000445902 H3BNG1 76 aa8.79□□□□□ -1
VPS52-212ENST00000445902 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
VPS52-212ENST00000445902 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
VPS52-212ENST00000445902 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
VPS52-212ENST00000445902 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
VPS52-212ENST00000445902 A6NED7 52 aa8.77□□□□□ -1.01
VPS52-212ENST00000445902 CD164Q04900 197 aa8.77□□□□□ -1.01
VPS52-212ENST00000445902 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
VPS52-212ENST00000445902 LCA10Q71F78 164 aa8.76□□□□□ -1.01
VPS52-212ENST00000445902 LIMD2Q9BT23 127 aa8.76□□□□□ -1.01
VPS52-212ENST00000445902 IGKV2-24A0A0C4DH68 120 aa8.76□□□□□ -1.01
VPS52-212ENST00000445902 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
VPS52-212ENST00000445902 A0A096LNI7 61 aa8.76□□□□□ -1.01
VPS52-212ENST00000445902 OXLD1Q5BKU9 147 aa8.75□□□□□ -1.01
VPS52-212ENST00000445902 SPANXA2-OT1Q8N9U9 137 aa8.74□□□□□ -1.01
VPS52-212ENST00000445902 PCOTHQ58A44 107 aa8.74□□□□□ -1.01
VPS52-212ENST00000445902 COA5Q86WW8 74 aa8.74□□□□□ -1.01
VPS52-212ENST00000445902 ANK2Q01484 3957 aa8.73□□□□□ -1.01
VPS52-212ENST00000445902 H0Y9J4 135 aa8.72□□□□□ -1.01
VPS52-212ENST00000445902 HECTD1Q9ULT8 2610 aa8.72□□□□□ -1.01
VPS52-212ENST00000445902 KTN1-AS1Q86SY8 53 aa8.72□□□□□ -1.01
VPS52-212ENST00000445902 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.01
VPS52-212ENST00000445902 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.01
VPS52-212ENST00000445902 TENM2Q9NT68 2774 aa8.71□□□□□ -1.02
VPS52-212ENST00000445902 INAFM1C9JVW0 142 aa8.7□□□□□ -1.02
VPS52-212ENST00000445902 MAST4O15021 2626 aa8.7□□□□□ -1.02
VPS52-212ENST00000445902 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
VPS52-212ENST00000445902 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
VPS52-212ENST00000445902 NOTCH1P46531 2555 aa8.69□□□□□ -1.02
VPS52-212ENST00000445902 SPAG11AQ6PDA7 123 aa8.69□□□□□ -1.02
VPS52-212ENST00000445902 A8MWP4 228 aa8.68□□□□□ -1.02
VPS52-212ENST00000445902 Q75L30 129 aa8.68□□□□□ -1.02
VPS52-212ENST00000445902 KRTAP10-11P60412 298 aa8.67□□□□□ -1.02
VPS52-212ENST00000445902 H3BPC8 53 aa8.67□□□□□ -1.02
VPS52-212ENST00000445902 COL6A5A8TX70 2615 aa8.66□□□□□ -1.02
VPS52-212ENST00000445902 IGLV8-61A0A075B6I0 122 aa8.66□□□□□ -1.02
VPS52-212ENST00000445902 ATP11AUNQ6ZP68 121 aa8.66□□□□□ -1.02
VPS52-212ENST00000445902 COL7A1Q02388 2944 aa8.66□□□□□ -1.02
VPS52-212ENST00000445902 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
VPS52-212ENST00000445902 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
VPS52-212ENST00000445902 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
VPS52-212ENST00000445902 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
VPS52-212ENST00000445902 A6NN06 94 aa8.63□□□□□ -1.03
VPS52-212ENST00000445902 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
VPS52-212ENST00000445902 STAB1Q9NY15 2570 aa8.62□□□□□ -1.03
VPS52-212ENST00000445902 CHTF8P0CG12 524 aa8.61□□□□□ -1.03
VPS52-212ENST00000445902 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
VPS52-212ENST00000445902 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
VPS52-212ENST00000445902 NBEAL1Q6ZS30 2694 aa8.6□□□□□ -1.03
VPS52-212ENST00000445902 CDC42SE1Q9NRR8 79 aa8.6□□□□□ -1.03
VPS52-212ENST00000445902 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
VPS52-212ENST00000445902 SPINK7P58062 85 aa8.58□□□□□ -1.04
VPS52-212ENST00000445902 NDUFS5O43920 106 aa8.58□□□□□ -1.04
VPS52-212ENST00000445902 MOBPQ13875 183 aa8.58□□□□□ -1.04
VPS52-212ENST00000445902 DNAH1Q9P2D7 4330 aa8.57□□□□□ -1.04
VPS52-212ENST00000445902 LYSTQ99698 3801 aa8.57□□□□□ -1.04
VPS52-212ENST00000445902 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
VPS52-212ENST00000445902 IGLV9-49A0A0B4J1Y8 123 aa8.53□□□□□ -1.04
VPS52-212ENST00000445902 HRES1P13985 223 aa8.52□□□□□ -1.04
VPS52-212ENST00000445902 C7orf65Q6ZTY9 151 aa8.52□□□□□ -1.05
VPS52-212ENST00000445902 IGHV6-1A0A0B4J1U7 121 aa8.51□□□□□ -1.05
VPS52-212ENST00000445902 KRTAP1-5Q9BYS1 174 aa8.51□□□□□ -1.05
VPS52-212ENST00000445902 SPRR1BP22528 89 aa8.49□□□□□ -1.05
VPS52-212ENST00000445902 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
VPS52-212ENST00000445902 Q96NJ1 140 aa8.49□□□□□ -1.05
VPS52-212ENST00000445902 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
VPS52-212ENST00000445902 PRR26Q8N8Z3 221 aa8.47□□□□□ -1.05
VPS52-212ENST00000445902 K7EIL1 84 aa8.46□□□□□ -1.05
VPS52-212ENST00000445902 J3QKU1 62 aa8.46□□□□□ -1.06
VPS52-212ENST00000445902 TP53AIP1Q9HCN2 124 aa8.46□□□□□ -1.06
VPS52-212ENST00000445902 A0A087X002 238 aa8.45□□□□□ -1.06
VPS52-212ENST00000445902 Q6ZR54 194 aa8.45□□□□□ -1.06
VPS52-212ENST00000445902 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
VPS52-212ENST00000445902 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
VPS52-212ENST00000445902 DNAH9Q9NYC9 4486 aa8.43□□□□□ -1.06
VPS52-212ENST00000445902 ASB16-AS1Q495Z4 193 aa8.42□□□□□ -1.06
VPS52-212ENST00000445902 PANO1I0J062 215 aa8.41□□□□□ -1.06
VPS52-212ENST00000445902 STAB2Q8WWQ8 2551 aa8.41□□□□□ -1.06
VPS52-212ENST00000445902 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
VPS52-212ENST00000445902 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
VPS52-212ENST00000445902 LINC00313P59037 77 aa8.39□□□□□ -1.07
VPS52-212ENST00000445902 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
VPS52-212ENST00000445902 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
VPS52-212ENST00000445902 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
VPS52-212ENST00000445902 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
VPS52-212ENST00000445902 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
VPS52-212ENST00000445902 Q5W150 140 aa8.35□□□□□ -1.07
VPS52-212ENST00000445902 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
VPS52-212ENST00000445902 MDFIQ99750 246 aa8.34□□□□□ -1.07
VPS52-212ENST00000445902 KRTAP13-1Q8IUC0 172 aa8.34□□□□□ -1.08
VPS52-212ENST00000445902 HUWE1Q7Z6Z7 4374 aaKnown RBP8.32□□□□□ -1.08
VPS52-212ENST00000445902 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
VPS52-212ENST00000445902 DNAH7Q8WXX0 4024 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms