RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 IGLV8-61A0A075B6I0 122 aa11.66□□□□□ -0.54
SEMA3D-202ENST00000444867 Q8NBF4 154 aa11.66□□□□□ -0.54
SEMA3D-202ENST00000444867 HAMPP81172 84 aa11.65□□□□□ -0.54
SEMA3D-202ENST00000444867 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
SEMA3D-202ENST00000444867 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
SEMA3D-202ENST00000444867 LCE6AA0A183 80 aa11.61□□□□□ -0.55
SEMA3D-202ENST00000444867 NREPQ16612 68 aa11.61□□□□□ -0.55
SEMA3D-202ENST00000444867 ATOX1O00244 68 aa11.6□□□□□ -0.55
SEMA3D-202ENST00000444867 A0A087WVE0 104 aa11.6□□□□□ -0.55
SEMA3D-202ENST00000444867 PSORS1C2Q9UIG4 136 aa11.58□□□□□ -0.56
SEMA3D-202ENST00000444867 SACSQ9NZJ4 4579 aa11.58□□□□□ -0.56
SEMA3D-202ENST00000444867 CRYGAP11844 174 aa11.57□□□□□ -0.56
SEMA3D-202ENST00000444867 IGFL1Q6UW32 110 aa11.57□□□□□ -0.56
SEMA3D-202ENST00000444867 FRAS1Q86XX4 4008 aa11.55□□□□□ -0.56
SEMA3D-202ENST00000444867 KRTAP10-2P60368 255 aa11.55□□□□□ -0.56
SEMA3D-202ENST00000444867 ZNF706Q9Y5V0 76 aaPredicted RBP11.54□□□□□ -0.56
SEMA3D-202ENST00000444867 RYR2Q92736 4967 aa11.52□□□□□ -0.56
SEMA3D-202ENST00000444867 HYDINQ4G0P3 5121 aa11.52□□□□□ -0.57
SEMA3D-202ENST00000444867 BPY2O14599 106 aa11.51□□□□□ -0.57
SEMA3D-202ENST00000444867 ZNF861PO60384 105 aa11.51□□□□□ -0.57
SEMA3D-202ENST00000444867 LINC00483Q53H64 154 aa11.51□□□□□ -0.57
SEMA3D-202ENST00000444867 SCXQ7RTU7 201 aa11.5□□□□□ -0.57
SEMA3D-202ENST00000444867 RYR3Q15413 4870 aa11.5□□□□□ -0.57
SEMA3D-202ENST00000444867 DNAH11Q96DT5 4516 aa11.49□□□□□ -0.57
SEMA3D-202ENST00000444867 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
SEMA3D-202ENST00000444867 Q6ZSA8 131 aa11.48□□□□□ -0.57
SEMA3D-202ENST00000444867 CCDC179H3BU77 68 aa11.47□□□□□ -0.57
SEMA3D-202ENST00000444867 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
SEMA3D-202ENST00000444867 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
SEMA3D-202ENST00000444867 CIRBP-AS1Q8TBR5 109 aa11.46□□□□□ -0.57
SEMA3D-202ENST00000444867 UQCRQO14949 82 aa11.46□□□□□ -0.58
SEMA3D-202ENST00000444867 COX7CP15954 63 aa11.46□□□□□ -0.58
SEMA3D-202ENST00000444867 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.58
SEMA3D-202ENST00000444867 FAM30AQ9NZY2 134 aa11.46□□□□□ -0.58
SEMA3D-202ENST00000444867 IGLV7-43P04211 117 aa11.45□□□□□ -0.58
SEMA3D-202ENST00000444867 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
SEMA3D-202ENST00000444867 SERP2Q8N6R1 65 aa11.44□□□□□ -0.58
SEMA3D-202ENST00000444867 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
SEMA3D-202ENST00000444867 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
SEMA3D-202ENST00000444867 A0A087WSZ3 146 aa11.41□□□□□ -0.58
SEMA3D-202ENST00000444867 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
SEMA3D-202ENST00000444867 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
SEMA3D-202ENST00000444867 PKD1P98161 4303 aa11.39□□□□□ -0.59
SEMA3D-202ENST00000444867 C9orf153Q5TBE3 101 aa11.38□□□□□ -0.59
SEMA3D-202ENST00000444867 LINC00336Q6ZUF6 198 aa11.38□□□□□ -0.59
SEMA3D-202ENST00000444867 Q8N9L7 120 aa11.38□□□□□ -0.59
SEMA3D-202ENST00000444867 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
SEMA3D-202ENST00000444867 DSCR10P59022 87 aa11.35□□□□□ -0.59
SEMA3D-202ENST00000444867 TRAV7A0A075B6U4 112 aa11.34□□□□□ -0.59
SEMA3D-202ENST00000444867 SRRM2Q9UQ35 2752 aaKnown RBP11.33□□□□□ -0.6
SEMA3D-202ENST00000444867 MOBPQ13875 183 aa11.3□□□□□ -0.6
SEMA3D-202ENST00000444867 K7EQZ3 153 aa11.28□□□□□ -0.6
SEMA3D-202ENST00000444867 LINC00472Q9H8W2 130 aa11.27□□□□□ -0.6
SEMA3D-202ENST00000444867 ANAPC11Q9NYG5 84 aa11.26□□□□□ -0.61
SEMA3D-202ENST00000444867 SS18L2Q9UHA2 77 aa11.26□□□□□ -0.61
SEMA3D-202ENST00000444867 J3KT08 172 aa11.25□□□□□ -0.61
SEMA3D-202ENST00000444867 DEFB116Q30KQ4 102 aa11.24□□□□□ -0.61
SEMA3D-202ENST00000444867 SSBP3-AS1Q7Z2R9 100 aa11.21□□□□□ -0.61
SEMA3D-202ENST00000444867 A8MWP4 228 aa11.2□□□□□ -0.62
SEMA3D-202ENST00000444867 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
SEMA3D-202ENST00000444867 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
SEMA3D-202ENST00000444867 A0A1B0GVY2 172 aa11.19□□□□□ -0.62
SEMA3D-202ENST00000444867 CD164Q04900 197 aa11.19□□□□□ -0.62
SEMA3D-202ENST00000444867 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
SEMA3D-202ENST00000444867 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
SEMA3D-202ENST00000444867 HRCT1Q6UXD1 115 aa11.17□□□□□ -0.62
SEMA3D-202ENST00000444867 C20orf197Q8N268 126 aa11.16□□□□□ -0.62
SEMA3D-202ENST00000444867 Q96NJ1 140 aa11.16□□□□□ -0.62
SEMA3D-202ENST00000444867 LRP1BQ9NZR2 4599 aa11.15□□□□□ -0.63
SEMA3D-202ENST00000444867 NDUFB1O75438 58 aa11.13□□□□□ -0.63
SEMA3D-202ENST00000444867 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
SEMA3D-202ENST00000444867 CYSTM1Q9H1C7 97 aa11.11□□□□□ -0.63
SEMA3D-202ENST00000444867 KRTAP29-1A8MX34 341 aaPredicted RBP11.09□□□□□ -0.63
SEMA3D-202ENST00000444867 TMEM258P61165 79 aa11.09□□□□□ -0.63
SEMA3D-202ENST00000444867 WFDC13Q8IUB5 93 aa11.08□□□□□ -0.64
SEMA3D-202ENST00000444867 EPPK1P58107 5090 aaKnown RBP11.08□□□□□ -0.64
SEMA3D-202ENST00000444867 A0A087X002 238 aa11.07□□□□□ -0.64
SEMA3D-202ENST00000444867 KRTAP1-4P0C5Y4 121 aa11.07□□□□□ -0.64
SEMA3D-202ENST00000444867 KRTAP13-2Q52LG2 175 aa11.07□□□□□ -0.64
SEMA3D-202ENST00000444867 CASC2Q6XLA1 102 aa11.07□□□□□ -0.64
SEMA3D-202ENST00000444867 TMEM254Q8TBM7 123 aa11.06□□□□□ -0.64
SEMA3D-202ENST00000444867 PKHD1P08F94 4074 aa11.06□□□□□ -0.64
SEMA3D-202ENST00000444867 ASB16-AS1Q495Z4 193 aa11.06□□□□□ -0.64
SEMA3D-202ENST00000444867 SPINK6Q6UWN8 80 aa11.06□□□□□ -0.64
SEMA3D-202ENST00000444867 NDUFC1O43677 76 aa11.04□□□□□ -0.64
SEMA3D-202ENST00000444867 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
SEMA3D-202ENST00000444867 MMP24-AS1A0A0U1RRL7 71 aa11.03□□□□□ -0.64
SEMA3D-202ENST00000444867 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
SEMA3D-202ENST00000444867 SNURFQ9Y675 71 aa11.02□□□□□ -0.64
SEMA3D-202ENST00000444867 VPS13BQ7Z7G8 4022 aa11.01□□□□□ -0.65
SEMA3D-202ENST00000444867 A0A0U1RQV1 116 aa11.01□□□□□ -0.65
SEMA3D-202ENST00000444867 A0A1B0GVX0 72 aa11.01□□□□□ -0.65
SEMA3D-202ENST00000444867 Q5XG85 94 aa11.01□□□□□ -0.65
SEMA3D-202ENST00000444867 C5orf47Q569G3 176 aa11□□□□□ -0.65
SEMA3D-202ENST00000444867 H7BZZ5 65 aa10.99□□□□□ -0.65
SEMA3D-202ENST00000444867 PLA2G1BP04054 148 aaKnown RBP10.98□□□□□ -0.65
SEMA3D-202ENST00000444867 C8orf17Q9NRJ1 99 aa10.98□□□□□ -0.65
SEMA3D-202ENST00000444867 hDV103S1A0JD37 113 aa10.98□□□□□ -0.65
SEMA3D-202ENST00000444867 IGHV6-1A0A0B4J1U7 121 aa10.95□□□□□ -0.66
SEMA3D-202ENST00000444867 LIMD2Q9BT23 127 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms