RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 A0A1W2PNM2 257 aa9.68□□□□□ -0.86
SNX13-204ENST00000444712 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.86
SNX13-204ENST00000444712 A0A087WVE0 104 aa9.65□□□□□ -0.86
SNX13-204ENST00000444712 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
SNX13-204ENST00000444712 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
SNX13-204ENST00000444712 CRYGAP11844 174 aa9.64□□□□□ -0.87
SNX13-204ENST00000444712 IGFL1Q6UW32 110 aa9.64□□□□□ -0.87
SNX13-204ENST00000444712 PSORS1C2Q9UIG4 136 aa9.64□□□□□ -0.87
SNX13-204ENST00000444712 BPY2O14599 106 aa9.61□□□□□ -0.87
SNX13-204ENST00000444712 TGP01266 2768 aa9.61□□□□□ -0.87
SNX13-204ENST00000444712 KRTAP10-2P60368 255 aa9.6□□□□□ -0.87
SNX13-204ENST00000444712 ZNF861PO60384 105 aa9.59□□□□□ -0.87
SNX13-204ENST00000444712 DNAH17Q9UFH2 4485 aa9.59□□□□□ -0.87
SNX13-204ENST00000444712 LINC00483Q53H64 154 aa9.58□□□□□ -0.88
SNX13-204ENST00000444712 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
SNX13-204ENST00000444712 RPL37AP61513 92 aaKnown RBP9.57□□□□□ -0.88
SNX13-204ENST00000444712 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
SNX13-204ENST00000444712 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
SNX13-204ENST00000444712 UQCRQO14949 82 aa9.56□□□□□ -0.88
SNX13-204ENST00000444712 COX7CP15954 63 aa9.55□□□□□ -0.88
SNX13-204ENST00000444712 Q6ZSA8 131 aa9.55□□□□□ -0.88
SNX13-204ENST00000444712 CCDC179H3BU77 68 aa9.55□□□□□ -0.88
SNX13-204ENST00000444712 SMIM20Q8N5G0 67 aa9.54□□□□□ -0.88
SNX13-204ENST00000444712 SERP2Q8N6R1 65 aa9.54□□□□□ -0.88
SNX13-204ENST00000444712 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
SNX13-204ENST00000444712 IGLV7-43P04211 117 aa9.53□□□□□ -0.88
SNX13-204ENST00000444712 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
SNX13-204ENST00000444712 A0A087WSZ3 146 aa9.51□□□□□ -0.89
SNX13-204ENST00000444712 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
SNX13-204ENST00000444712 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
SNX13-204ENST00000444712 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
SNX13-204ENST00000444712 LCE6AA0A183 80 aa9.49□□□□□ -0.89
SNX13-204ENST00000444712 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
SNX13-204ENST00000444712 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
SNX13-204ENST00000444712 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
SNX13-204ENST00000444712 FRAS1Q86XX4 4008 aa9.47□□□□□ -0.89
SNX13-204ENST00000444712 TRAV7A0A075B6U4 112 aa9.46□□□□□ -0.9
SNX13-204ENST00000444712 Q8N9L7 120 aa9.46□□□□□ -0.9
SNX13-204ENST00000444712 DSCR10P59022 87 aa9.44□□□□□ -0.9
SNX13-204ENST00000444712 SS18L2Q9UHA2 77 aa9.42□□□□□ -0.9
SNX13-204ENST00000444712 MOBPQ13875 183 aa9.41□□□□□ -0.9
SNX13-204ENST00000444712 J3KT08 172 aa9.4□□□□□ -0.9
SNX13-204ENST00000444712 K7EQZ3 153 aa9.39□□□□□ -0.91
SNX13-204ENST00000444712 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
SNX13-204ENST00000444712 DNAH8Q96JB1 4490 aa9.37□□□□□ -0.91
SNX13-204ENST00000444712 DNAH11Q96DT5 4516 aa9.35□□□□□ -0.91
SNX13-204ENST00000444712 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
SNX13-204ENST00000444712 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
SNX13-204ENST00000444712 ANAPC11Q9NYG5 84 aa9.35□□□□□ -0.91
SNX13-204ENST00000444712 DEFB116Q30KQ4 102 aa9.34□□□□□ -0.91
SNX13-204ENST00000444712 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.91
SNX13-204ENST00000444712 SRRM2Q9UQ35 2752 aaKnown RBP9.34□□□□□ -0.91
SNX13-204ENST00000444712 A8MWP4 228 aa9.34□□□□□ -0.91
SNX13-204ENST00000444712 CD164Q04900 197 aa9.34□□□□□ -0.91
SNX13-204ENST00000444712 PKD1P98161 4303 aa9.33□□□□□ -0.92
SNX13-204ENST00000444712 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
SNX13-204ENST00000444712 HYDINQ4G0P3 5121 aa9.32□□□□□ -0.92
SNX13-204ENST00000444712 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
SNX13-204ENST00000444712 PRR15Q8IV56 129 aa9.32□□□□□ -0.92
SNX13-204ENST00000444712 OCR1Q9BZK8 76 aa9.32□□□□□ -0.92
SNX13-204ENST00000444712 NDUFB1O75438 58 aa9.31□□□□□ -0.92
SNX13-204ENST00000444712 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
SNX13-204ENST00000444712 C20orf197Q8N268 126 aa9.31□□□□□ -0.92
SNX13-204ENST00000444712 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
SNX13-204ENST00000444712 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
SNX13-204ENST00000444712 Q96NJ1 140 aa9.27□□□□□ -0.92
SNX13-204ENST00000444712 TMEM258P61165 79 aa9.26□□□□□ -0.93
SNX13-204ENST00000444712 CDK2AP2O75956 126 aa9.24□□□□□ -0.93
SNX13-204ENST00000444712 CASC2Q6XLA1 102 aa9.24□□□□□ -0.93
SNX13-204ENST00000444712 NDUFC1O43677 76 aa9.23□□□□□ -0.93
SNX13-204ENST00000444712 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
SNX13-204ENST00000444712 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
SNX13-204ENST00000444712 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
SNX13-204ENST00000444712 KRTAP29-1A8MX34 341 aaPredicted RBP9.22□□□□□ -0.93
SNX13-204ENST00000444712 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
SNX13-204ENST00000444712 CYSTM1Q9H1C7 97 aa9.22□□□□□ -0.93
SNX13-204ENST00000444712 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.93
SNX13-204ENST00000444712 A0A087X002 238 aa9.21□□□□□ -0.94
SNX13-204ENST00000444712 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
SNX13-204ENST00000444712 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
SNX13-204ENST00000444712 C5orf47Q569G3 176 aa9.19□□□□□ -0.94
SNX13-204ENST00000444712 SNURFQ9Y675 71 aa9.19□□□□□ -0.94
SNX13-204ENST00000444712 MMP24-AS1A0A0U1RRL7 71 aa9.18□□□□□ -0.94
SNX13-204ENST00000444712 A0A1B0GVX0 72 aa9.18□□□□□ -0.94
SNX13-204ENST00000444712 Q5XG85 94 aa9.17□□□□□ -0.94
SNX13-204ENST00000444712 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
SNX13-204ENST00000444712 hDV103S1A0JD37 113 aa9.16□□□□□ -0.94
SNX13-204ENST00000444712 H7BZZ5 65 aa9.15□□□□□ -0.94
SNX13-204ENST00000444712 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
SNX13-204ENST00000444712 LIMD2Q9BT23 127 aa9.15□□□□□ -0.94
SNX13-204ENST00000444712 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
SNX13-204ENST00000444712 IGHV6-1A0A0B4J1U7 121 aa9.12□□□□□ -0.95
SNX13-204ENST00000444712 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
SNX13-204ENST00000444712 MP68P56378 58 aa9.11□□□□□ -0.95
SNX13-204ENST00000444712 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
SNX13-204ENST00000444712 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
SNX13-204ENST00000444712 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
SNX13-204ENST00000444712 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
SNX13-204ENST00000444712 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.95
SNX13-204ENST00000444712 H3BPC8 53 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms