RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NBEAL1Q6ZS30 2694 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 SPENQ96T58 3664 aaKnown RBP1.98□□□□□ -2.09
UBR3-206ENST00000444475 IGLV4-60A0A075B6I1 120 aa1.97□□□□□ -2.09
UBR3-206ENST00000444475 ARL14EPLP0DKL9 152 aa1.97□□□□□ -2.09
UBR3-206ENST00000444475 COX7BP24311 80 aa1.97□□□□□ -2.09
UBR3-206ENST00000444475 MEGF8Q7Z7M0 2845 aa1.97□□□□□ -2.09
UBR3-206ENST00000444475 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
UBR3-206ENST00000444475 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
UBR3-206ENST00000444475 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
UBR3-206ENST00000444475 SPINK4O60575 86 aa1.96□□□□□ -2.1
UBR3-206ENST00000444475 A0A1B0GU69 56 aa1.96□□□□□ -2.1
UBR3-206ENST00000444475 KRTAP12-2P59991 146 aa1.96□□□□□ -2.1
UBR3-206ENST00000444475 U3KQA8 63 aa1.96□□□□□ -2.1
UBR3-206ENST00000444475 ACYP2P14621 99 aa1.95□□□□□ -2.1
UBR3-206ENST00000444475 CCL19Q99731 98 aa1.95□□□□□ -2.1
UBR3-206ENST00000444475 UTP20O75691 2785 aaKnown RBP1.95□□□□□ -2.1
UBR3-206ENST00000444475 WDFY3Q8IZQ1 3526 aa1.95□□□□□ -2.1
UBR3-206ENST00000444475 NIPBLQ6KC79 2804 aaeCLIP1.95□□□□□ -2.1
UBR3-206ENST00000444475 COL6A5A8TX70 2615 aa1.95□□□□□ -2.1
UBR3-206ENST00000444475 COL12A1Q99715 3063 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 LAMA5O15230 3695 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 IGKV2D-24A0A075B6R9 120 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 LY6G6CO95867 125 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 ADGRG4Q8IZF6 3080 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 GVQW2A0A096LPI5 108 aaPredicted RBP1.94□□□□□ -2.1
UBR3-206ENST00000444475 KRTAP19-1Q8IUB9 90 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 RYR2Q92736 4967 aa1.94□□□□□ -2.1
UBR3-206ENST00000444475 EPPK1P58107 5090 aaKnown RBP1.94□□□□□ -2.1
UBR3-206ENST00000444475 HYDINQ4G0P3 5121 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 FREM1Q5H8C1 2179 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 ETDCA0A1B0GVM5 59 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 CENPEQ02224 2701 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 ATMQ13315 3056 aa1.93□□□□□ -2.1
UBR3-206ENST00000444475 CPSF4LA6NMK7 179 aaKnown RBP1.92□□□□□ -2.1
UBR3-206ENST00000444475 PRR9Q5T870 116 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 Q6ZRX8 168 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 GOLGA4Q13439 2230 aaKnown RBP1.92□□□□□ -2.1
UBR3-206ENST00000444475 KRTAP1-1Q07627 177 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 TNCP24821 2201 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 KNTC1P50748 2209 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 MXRA5Q9NR99 2828 aa1.92□□□□□ -2.1
UBR3-206ENST00000444475 DEFB109BQ30KR1 87 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
UBR3-206ENST00000444475 CRIP1P50238 77 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 PIN1P1O15428 100 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 Q6ZQY7 126 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 DEFB119Q8N690 84 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 SMR3AQ99954 134 aa1.91□□□□□ -2.1
UBR3-206ENST00000444475 FLNAP21333 2647 aaKnown RBP1.91□□□□□ -2.1
UBR3-206ENST00000444475 ACANP16112 2415 aa1.9□□□□□ -2.1
UBR3-206ENST00000444475 NCR3O14931 201 aa1.9□□□□□ -2.11
UBR3-206ENST00000444475 NOTCH1P46531 2555 aa1.9□□□□□ -2.11
UBR3-206ENST00000444475 MGAQ8IWI9 3026 aa1.9□□□□□ -2.11
UBR3-206ENST00000444475 NDUFA3O95167 84 aa1.9□□□□□ -2.11
UBR3-206ENST00000444475 PRKDCP78527 4128 aaKnown RBP1.89□□□□□ -2.11
UBR3-206ENST00000444475 PKD1L1Q8TDX9 2849 aa1.89□□□□□ -2.11
UBR3-206ENST00000444475 CELSR3Q9NYQ7 3312 aa1.89□□□□□ -2.11
UBR3-206ENST00000444475 PP632Q6XCG6 107 aa1.89□□□□□ -2.11
UBR3-206ENST00000444475 H0YGX0 51 aa1.89□□□□□ -2.11
UBR3-206ENST00000444475 SMIM11BQ8TCY0 68 aa1.89□□□□□ -2.11
UBR3-206ENST00000444475 TLN2Q9Y4G6 2542 aa1.89□□□□□ -2.11
UBR3-206ENST00000444475 IGKV2-28A0A075B6P5 120 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 IGKV2D-28P01615 120 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 TFF3Q07654 80 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP9-3Q9BYQ3 159 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 CSMD1Q96PZ7 3565 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 DEFB131BA0A096LNP1 70 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 IGFL1Q6UW32 110 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 MGAM2Q2M2H8 2515 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 PRRC2CQ9Y520 2896 aaKnown RBP1.88□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
UBR3-206ENST00000444475 DNAH3Q8TD57 4116 aa1.87□□□□□ -2.11
UBR3-206ENST00000444475 FXYD6P3P58550 94 aa1.87□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP10-6P60371 365 aaPredicted RBP1.87□□□□□ -2.11
UBR3-206ENST00000444475 BOD1L1Q8NFC6 3051 aa1.87□□□□□ -2.11
UBR3-206ENST00000444475 HAMPP81172 84 aa1.87□□□□□ -2.11
UBR3-206ENST00000444475 CADP27708 2225 aa1.87□□□□□ -2.11
UBR3-206ENST00000444475 A0A1B0GVY2 172 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 ANGP03950 147 aaKnown RBP1.86□□□□□ -2.11
UBR3-206ENST00000444475 MT3P25713 68 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP10-11P60412 298 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 SSBP3-AS1Q7Z2R9 100 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 KIAA1109Q2LD37 5005 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 NBEAL2Q6ZNJ1 2754 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 CRYBG3Q68DQ2 2970 aa1.86□□□□□ -2.11
UBR3-206ENST00000444475 RYR1P21817 5038 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP10-1P60331 282 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 TIMM8BQ9Y5J9 83 aaPredicted RBP1.85□□□□□ -2.11
UBR3-206ENST00000444475 SACSQ9NZJ4 4579 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 TRRAPQ9Y4A5 3859 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 TGP01266 2768 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
UBR3-206ENST00000444475 ABCA1O95477 2261 aa1.84□□□□□ -2.11
UBR3-206ENST00000444475 KRTAP10-3P60369 221 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms