RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
PTPRE-203ENST00000442830 VAMP3Q15836 100 aa7.35□□□□□ -1.23
PTPRE-203ENST00000442830 Q6JHZ5 121 aa7.34□□□□□ -1.23
PTPRE-203ENST00000442830 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
PTPRE-203ENST00000442830 KRTDAPP60985 99 aa7.33□□□□□ -1.24
PTPRE-203ENST00000442830 MUSTN1Q8IVN3 82 aa7.32□□□□□ -1.24
PTPRE-203ENST00000442830 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
PTPRE-203ENST00000442830 COA6Q5JTJ3 125 aaKnown RBP7.31□□□□□ -1.24
PTPRE-203ENST00000442830 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
PTPRE-203ENST00000442830 S100A1P23297 94 aa7.3□□□□□ -1.24
PTPRE-203ENST00000442830 CLEC2BQ92478 149 aa7.3□□□□□ -1.24
PTPRE-203ENST00000442830 KRTAP4-12Q9BQ66 201 aa7.3□□□□□ -1.24
PTPRE-203ENST00000442830 FLGP20930 4061 aaPredicted RBP7.28□□□□□ -1.24
PTPRE-203ENST00000442830 ANKRD39Q53RE8 183 aa7.28□□□□□ -1.24
PTPRE-203ENST00000442830 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
PTPRE-203ENST00000442830 PPDPFLQ8WWR9 84 aa7.28□□□□□ -1.24
PTPRE-203ENST00000442830 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 TRBV7-7A0A0K0K1E9 115 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 hADV29S1A0JD25 119 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 SCGB1D1O95968 90 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 LINC00575Q6W349 94 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 Q75L30 129 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 PCP2Q8IVA1 136 aa7.27□□□□□ -1.25
PTPRE-203ENST00000442830 Q6ZQY7 126 aa7.25□□□□□ -1.25
PTPRE-203ENST00000442830 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
PTPRE-203ENST00000442830 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
PTPRE-203ENST00000442830 BVES-AS1Q5T3Y7 98 aa7.22□□□□□ -1.25
PTPRE-203ENST00000442830 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
PTPRE-203ENST00000442830 ATOH7Q8N100 152 aa7.22□□□□□ -1.25
PTPRE-203ENST00000442830 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
PTPRE-203ENST00000442830 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.26
PTPRE-203ENST00000442830 LST1O00453 97 aa7.21□□□□□ -1.26
PTPRE-203ENST00000442830 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
PTPRE-203ENST00000442830 OBSCN-AS1Q96MR7 158 aa7.21□□□□□ -1.26
PTPRE-203ENST00000442830 SNCGO76070 127 aa7.2□□□□□ -1.26
PTPRE-203ENST00000442830 CFC1P0CG37 223 aa7.2□□□□□ -1.26
PTPRE-203ENST00000442830 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
PTPRE-203ENST00000442830 SNHG12Q9BXW3 62 aa7.2□□□□□ -1.26
PTPRE-203ENST00000442830 Q6Q795 121 aa7.19□□□□□ -1.26
PTPRE-203ENST00000442830 TRBV20-1A0A075B6N2 111 aa7.16□□□□□ -1.26
PTPRE-203ENST00000442830 C12orf57Q99622 126 aa7.16□□□□□ -1.26
PTPRE-203ENST00000442830 Q96NJ1 140 aa7.15□□□□□ -1.26
PTPRE-203ENST00000442830 C20orf166-AS1Q96NR2 134 aa7.14□□□□□ -1.27
PTPRE-203ENST00000442830 S100A2P29034 98 aa7.12□□□□□ -1.27
PTPRE-203ENST00000442830 TEN1Q86WV5 123 aa7.12□□□□□ -1.27
PTPRE-203ENST00000442830 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
PTPRE-203ENST00000442830 A8MUU9 505 aa7.1□□□□□ -1.27
PTPRE-203ENST00000442830 H0YGX0 51 aa7.09□□□□□ -1.27
PTPRE-203ENST00000442830 H3BUT2 72 aa7.09□□□□□ -1.27
PTPRE-203ENST00000442830 HIST1H2BLQ99880 126 aa7.07□□□□□ -1.28
PTPRE-203ENST00000442830 KRTAP9-9Q9BYP9 154 aa7.07□□□□□ -1.28
PTPRE-203ENST00000442830 KRTAP9-4Q9BYQ2 154 aa7.07□□□□□ -1.28
PTPRE-203ENST00000442830 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
PTPRE-203ENST00000442830 HIST3H2BBQ8N257 126 aa7.06□□□□□ -1.28
PTPRE-203ENST00000442830 A0A1B0GX51 115 aa7.05□□□□□ -1.28
PTPRE-203ENST00000442830 NDUFV3P56181 108 aaKnown RBP7.05□□□□□ -1.28
PTPRE-203ENST00000442830 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
PTPRE-203ENST00000442830 A0A087WSZ3 146 aa7.04□□□□□ -1.28
PTPRE-203ENST00000442830 DLEU1O43261 78 aa7.03□□□□□ -1.28
PTPRE-203ENST00000442830 COX8AP10176 69 aa7.03□□□□□ -1.28
PTPRE-203ENST00000442830 A0A0B4J2C4 111 aa7.02□□□□□ -1.29
PTPRE-203ENST00000442830 S100A6P06703 90 aa7.02□□□□□ -1.29
PTPRE-203ENST00000442830 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
PTPRE-203ENST00000442830 H3BMG7 143 aa7.01□□□□□ -1.29
PTPRE-203ENST00000442830 SIGMAR1Q99720 223 aa7.01□□□□□ -1.29
PTPRE-203ENST00000442830 FAM236DA0A1B0GTK5 79 aa7□□□□□ -1.29
PTPRE-203ENST00000442830 H3BQ85 93 aa7□□□□□ -1.29
PTPRE-203ENST00000442830 FAM236CP0DP71 79 aa7□□□□□ -1.29
PTPRE-203ENST00000442830 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
PTPRE-203ENST00000442830 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
PTPRE-203ENST00000442830 LINC00313P59037 77 aa6.99□□□□□ -1.29
PTPRE-203ENST00000442830 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
PTPRE-203ENST00000442830 FABP2P12104 132 aa6.97□□□□□ -1.29
PTPRE-203ENST00000442830 DSCR10P59022 87 aa6.97□□□□□ -1.29
PTPRE-203ENST00000442830 TRBV7-4A0A0J9YYF1 115 aa6.96□□□□□ -1.3
PTPRE-203ENST00000442830 FAM218AQ96MZ4 157 aa6.95□□□□□ -1.3
PTPRE-203ENST00000442830 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
PTPRE-203ENST00000442830 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
PTPRE-203ENST00000442830 DNAL4O96015 105 aa6.93□□□□□ -1.3
PTPRE-203ENST00000442830 MTURNQ8N3F0 131 aa6.93□□□□□ -1.3
PTPRE-203ENST00000442830 ANKRD29Q8N6D5 301 aa6.93□□□□□ -1.3
PTPRE-203ENST00000442830 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
PTPRE-203ENST00000442830 A0A1W2PNM2 257 aa6.92□□□□□ -1.3
PTPRE-203ENST00000442830 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
PTPRE-203ENST00000442830 MT2AP02795 61 aa6.9□□□□□ -1.3
PTPRE-203ENST00000442830 CEND1Q8N111 149 aa6.9□□□□□ -1.3
PTPRE-203ENST00000442830 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.3
PTPRE-203ENST00000442830 ORMDL1Q9P0S3 153 aa6.9□□□□□ -1.3
PTPRE-203ENST00000442830 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
PTPRE-203ENST00000442830 C14orf144Q96I85 54 aa6.89□□□□□ -1.31
PTPRE-203ENST00000442830 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
PTPRE-203ENST00000442830 TRACP01848 142 aa6.88□□□□□ -1.31
PTPRE-203ENST00000442830 HRES1P13985 223 aa6.88□□□□□ -1.31
PTPRE-203ENST00000442830 SPATA45Q537H7 98 aa6.88□□□□□ -1.31
PTPRE-203ENST00000442830 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
PTPRE-203ENST00000442830 USH2AO75445 5202 aa6.87□□□□□ -1.31
PTPRE-203ENST00000442830 VAMP8Q9BV40 100 aa6.87□□□□□ -1.31
PTPRE-203ENST00000442830 PAM16Q9Y3D7 125 aa6.87□□□□□ -1.31
PTPRE-203ENST00000442830 SSPOA2VEC9 5147 aa6.86□□□□□ -1.31
PTPRE-203ENST00000442830 TRIAP1O43715 76 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms