RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 PSCAO43653 123 aa8.32□□□□□ -1.08
SLC48A1-201ENST00000442218 PRKDCP78527 4128 aaKnown RBP8.32□□□□□ -1.08
SLC48A1-201ENST00000442218 REG3GQ6UW15 175 aa8.32□□□□□ -1.08
SLC48A1-201ENST00000442218 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
SLC48A1-201ENST00000442218 KRTAP11-1Q8IUC1 163 aa8.31□□□□□ -1.08
SLC48A1-201ENST00000442218 BCE1O60756 84 aa8.3□□□□□ -1.08
SLC48A1-201ENST00000442218 PHF5AQ7RTV0 110 aaKnown RBP8.29□□□□□ -1.08
SLC48A1-201ENST00000442218 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
SLC48A1-201ENST00000442218 TNP2Q05952 138 aa8.29□□□□□ -1.08
SLC48A1-201ENST00000442218 PKIGQ9Y2B9 76 aa8.29□□□□□ -1.08
SLC48A1-201ENST00000442218 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
SLC48A1-201ENST00000442218 SMIM26A0A096LP01 95 aa8.28□□□□□ -1.08
SLC48A1-201ENST00000442218 SPRR1AP35321 89 aa8.27□□□□□ -1.09
SLC48A1-201ENST00000442218 TLX1NBP0CAT3 122 aa8.26□□□□□ -1.09
SLC48A1-201ENST00000442218 MEGF8Q7Z7M0 2845 aa8.25□□□□□ -1.09
SLC48A1-201ENST00000442218 NDUFC1O43677 76 aa8.25□□□□□ -1.09
SLC48A1-201ENST00000442218 UBE2DNLQ8IWF7 75 aa8.24□□□□□ -1.09
SLC48A1-201ENST00000442218 STARD9Q9P2P6 4700 aa8.24□□□□□ -1.09
SLC48A1-201ENST00000442218 DYNC2H1Q8NCM8 4307 aaKnown RBP8.24□□□□□ -1.09
SLC48A1-201ENST00000442218 KMT2AQ03164 3969 aa8.24□□□□□ -1.09
SLC48A1-201ENST00000442218 B9D2Q9BPU9 175 aa8.24□□□□□ -1.09
SLC48A1-201ENST00000442218 UBE2AP49459 152 aa8.23□□□□□ -1.09
SLC48A1-201ENST00000442218 HCG22E2RYF7 251 aa8.21□□□□□ -1.09
SLC48A1-201ENST00000442218 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.09
SLC48A1-201ENST00000442218 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
SLC48A1-201ENST00000442218 PANO1I0J062 215 aa8.2□□□□□ -1.1
SLC48A1-201ENST00000442218 PSPHP1O15172 72 aa8.2□□□□□ -1.1
SLC48A1-201ENST00000442218 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
SLC48A1-201ENST00000442218 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
SLC48A1-201ENST00000442218 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
SLC48A1-201ENST00000442218 LINC00208Q96KT6 92 aa8.19□□□□□ -1.1
SLC48A1-201ENST00000442218 F8WDY8 70 aa8.17□□□□□ -1.1
SLC48A1-201ENST00000442218 IGLV9-49A0A0B4J1Y8 123 aa8.16□□□□□ -1.1
SLC48A1-201ENST00000442218 C16orf90A8MZG2 172 aa8.16□□□□□ -1.1
SLC48A1-201ENST00000442218 H0Y9J4 135 aa8.16□□□□□ -1.1
SLC48A1-201ENST00000442218 ANAPC11Q9NYG5 84 aa8.15□□□□□ -1.11
SLC48A1-201ENST00000442218 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
SLC48A1-201ENST00000442218 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
SLC48A1-201ENST00000442218 ATP5EP56381 51 aaPredicted RBP8.13□□□□□ -1.11
SLC48A1-201ENST00000442218 hDV103S1A0JD37 113 aa8.11□□□□□ -1.11
SLC48A1-201ENST00000442218 FBN3Q75N90 2809 aa8.1□□□□□ -1.11
SLC48A1-201ENST00000442218 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
SLC48A1-201ENST00000442218 A8MU10 97 aa8.09□□□□□ -1.11
SLC48A1-201ENST00000442218 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
SLC48A1-201ENST00000442218 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
SLC48A1-201ENST00000442218 H0Y9P7 68 aa8.08□□□□□ -1.12
SLC48A1-201ENST00000442218 DNAH2Q9P225 4427 aa8.08□□□□□ -1.12
SLC48A1-201ENST00000442218 PCOTHQ58A44 107 aa8.08□□□□□ -1.12
SLC48A1-201ENST00000442218 MP68P56378 58 aa8.07□□□□□ -1.12
SLC48A1-201ENST00000442218 VPS13DQ5THJ4 4388 aa8.06□□□□□ -1.12
SLC48A1-201ENST00000442218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.06□□□□□ -1.12
SLC48A1-201ENST00000442218 LCE6AA0A183 80 aa8.05□□□□□ -1.12
SLC48A1-201ENST00000442218 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
SLC48A1-201ENST00000442218 A8MUN3 132 aa8.04□□□□□ -1.12
SLC48A1-201ENST00000442218 NUPR2A6NF83 97 aa8.03□□□□□ -1.12
SLC48A1-201ENST00000442218 DNAH6Q9C0G6 4158 aa8.03□□□□□ -1.12
SLC48A1-201ENST00000442218 A0A1B0GW54 56 aa8.03□□□□□ -1.12
SLC48A1-201ENST00000442218 NDUFS5O43920 106 aa8.03□□□□□ -1.12
SLC48A1-201ENST00000442218 TRAV22A0A0B4J277 110 aa8.03□□□□□ -1.12
SLC48A1-201ENST00000442218 HECTD4Q9Y4D8 3996 aa8.02□□□□□ -1.13
SLC48A1-201ENST00000442218 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
SLC48A1-201ENST00000442218 C9orf163Q8N9P6 203 aa8□□□□□ -1.13
SLC48A1-201ENST00000442218 LINC00472Q9H8W2 130 aa8□□□□□ -1.13
SLC48A1-201ENST00000442218 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
SLC48A1-201ENST00000442218 A8MWP4 228 aa7.99□□□□□ -1.13
SLC48A1-201ENST00000442218 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
SLC48A1-201ENST00000442218 DNAH17Q9UFH2 4485 aa7.98□□□□□ -1.13
SLC48A1-201ENST00000442218 IGLV8-61A0A075B6I0 122 aa7.98□□□□□ -1.13
SLC48A1-201ENST00000442218 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
SLC48A1-201ENST00000442218 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
SLC48A1-201ENST00000442218 MOBPQ13875 183 aa7.97□□□□□ -1.13
SLC48A1-201ENST00000442218 A0A087X002 238 aa7.96□□□□□ -1.13
SLC48A1-201ENST00000442218 KRTAP21-3Q3LHN1 58 aa7.96□□□□□ -1.13
SLC48A1-201ENST00000442218 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.13
SLC48A1-201ENST00000442218 MMP24-AS1A0A0U1RRL7 71 aa7.95□□□□□ -1.14
SLC48A1-201ENST00000442218 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
SLC48A1-201ENST00000442218 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
SLC48A1-201ENST00000442218 C14orf177Q52M58 125 aa7.93□□□□□ -1.14
SLC48A1-201ENST00000442218 NDUFB1O75438 58 aa7.92□□□□□ -1.14
SLC48A1-201ENST00000442218 DNAH11Q96DT5 4516 aa7.92□□□□□ -1.14
SLC48A1-201ENST00000442218 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
SLC48A1-201ENST00000442218 Q1T7F1 81 aa7.9□□□□□ -1.14
SLC48A1-201ENST00000442218 CYP4F30PQ9H0H9 118 aa7.9□□□□□ -1.14
SLC48A1-201ENST00000442218 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
SLC48A1-201ENST00000442218 CHKB-CPT1BH3BT56 60 aa7.9□□□□□ -1.14
SLC48A1-201ENST00000442218 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
SLC48A1-201ENST00000442218 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
SLC48A1-201ENST00000442218 SPRR1BP22528 89 aa7.89□□□□□ -1.15
SLC48A1-201ENST00000442218 Q96NJ1 140 aa7.89□□□□□ -1.15
SLC48A1-201ENST00000442218 CD164Q04900 197 aa7.88□□□□□ -1.15
SLC48A1-201ENST00000442218 KRTAP13-1Q8IUC0 172 aa7.87□□□□□ -1.15
SLC48A1-201ENST00000442218 SPTSSBQ8NFR3 76 aa7.87□□□□□ -1.15
SLC48A1-201ENST00000442218 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
SLC48A1-201ENST00000442218 Q5VV11 94 aa7.86□□□□□ -1.15
SLC48A1-201ENST00000442218 COA5Q86WW8 74 aa7.86□□□□□ -1.15
SLC48A1-201ENST00000442218 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
SLC48A1-201ENST00000442218 CIRBP-AS1Q8TBR5 109 aa7.86□□□□□ -1.15
SLC48A1-201ENST00000442218 A0A087WTM6 91 aa7.85□□□□□ -1.15
SLC48A1-201ENST00000442218 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
SLC48A1-201ENST00000442218 RTL8CO15255 209 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms