RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 COL6A5A8TX70 2615 aa10.42□□□□□ -0.74
SEMA3B-207ENST00000441915 LYSTQ99698 3801 aa10.42□□□□□ -0.74
SEMA3B-207ENST00000441915 CNBPP62633 177 aaKnown RBP10.42□□□□□ -0.74
SEMA3B-207ENST00000441915 IGFL1Q6UW32 110 aa10.41□□□□□ -0.74
SEMA3B-207ENST00000441915 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
SEMA3B-207ENST00000441915 A0A1W2PNN7 141 aa10.41□□□□□ -0.74
SEMA3B-207ENST00000441915 hDV103S1A0JD37 113 aa10.4□□□□□ -0.75
SEMA3B-207ENST00000441915 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
SEMA3B-207ENST00000441915 LCE6AA0A183 80 aa10.38□□□□□ -0.75
SEMA3B-207ENST00000441915 Q1T7F1 81 aa10.38□□□□□ -0.75
SEMA3B-207ENST00000441915 HCG22E2RYF7 251 aa10.36□□□□□ -0.75
SEMA3B-207ENST00000441915 IGLV8-61A0A075B6I0 122 aa10.36□□□□□ -0.75
SEMA3B-207ENST00000441915 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
SEMA3B-207ENST00000441915 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
SEMA3B-207ENST00000441915 DNAH9Q9NYC9 4486 aa10.35□□□□□ -0.75
SEMA3B-207ENST00000441915 LRCOL1A6NCL2 159 aa10.35□□□□□ -0.75
SEMA3B-207ENST00000441915 A0A087WSZ3 146 aa10.35□□□□□ -0.75
SEMA3B-207ENST00000441915 UBE2AP49459 152 aa10.34□□□□□ -0.75
SEMA3B-207ENST00000441915 C14orf177Q52M58 125 aa10.34□□□□□ -0.75
SEMA3B-207ENST00000441915 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
SEMA3B-207ENST00000441915 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
SEMA3B-207ENST00000441915 STAB2Q8WWQ8 2551 aa10.31□□□□□ -0.76
SEMA3B-207ENST00000441915 MGAM2Q2M2H8 2515 aa10.31□□□□□ -0.76
SEMA3B-207ENST00000441915 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
SEMA3B-207ENST00000441915 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
SEMA3B-207ENST00000441915 ZCCHC13Q8WW36 166 aaKnown RBP10.29□□□□□ -0.76
SEMA3B-207ENST00000441915 H0Y9J4 135 aa10.28□□□□□ -0.76
SEMA3B-207ENST00000441915 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
SEMA3B-207ENST00000441915 PSPHP1O15172 72 aa10.28□□□□□ -0.76
SEMA3B-207ENST00000441915 KRTAP11-1Q8IUC1 163 aa10.27□□□□□ -0.76
SEMA3B-207ENST00000441915 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
SEMA3B-207ENST00000441915 TRAV22A0A0B4J277 110 aa10.26□□□□□ -0.77
SEMA3B-207ENST00000441915 COL7A1Q02388 2944 aa10.26□□□□□ -0.77
SEMA3B-207ENST00000441915 SPRR1BP22528 89 aa10.26□□□□□ -0.77
SEMA3B-207ENST00000441915 CSMD3Q7Z407 3707 aa10.25□□□□□ -0.77
SEMA3B-207ENST00000441915 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
SEMA3B-207ENST00000441915 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
SEMA3B-207ENST00000441915 CD164Q04900 197 aa10.23□□□□□ -0.77
SEMA3B-207ENST00000441915 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
SEMA3B-207ENST00000441915 B9D2Q9BPU9 175 aa10.21□□□□□ -0.77
SEMA3B-207ENST00000441915 MP68P56378 58 aa10.2□□□□□ -0.78
SEMA3B-207ENST00000441915 DNAH7Q8WXX0 4024 aa10.2□□□□□ -0.78
SEMA3B-207ENST00000441915 CYP4F30PQ9H0H9 118 aa10.2□□□□□ -0.78
SEMA3B-207ENST00000441915 NDUFB1O75438 58 aa10.2□□□□□ -0.78
SEMA3B-207ENST00000441915 KRTAP29-1A8MX34 341 aaPredicted RBP10.19□□□□□ -0.78
SEMA3B-207ENST00000441915 TENM2Q9NT68 2774 aa10.18□□□□□ -0.78
SEMA3B-207ENST00000441915 CASC2Q6XLA1 102 aa10.17□□□□□ -0.78
SEMA3B-207ENST00000441915 LINC00472Q9H8W2 130 aa10.17□□□□□ -0.78
SEMA3B-207ENST00000441915 A8MUN3 132 aa10.17□□□□□ -0.78
SEMA3B-207ENST00000441915 A8MWP4 228 aa10.17□□□□□ -0.78
SEMA3B-207ENST00000441915 DYNC2H1Q8NCM8 4307 aaKnown RBP10.16□□□□□ -0.78
SEMA3B-207ENST00000441915 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
SEMA3B-207ENST00000441915 PRR4Q16378 134 aa10.15□□□□□ -0.78
SEMA3B-207ENST00000441915 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.79
SEMA3B-207ENST00000441915 LINC00208Q96KT6 92 aa10.14□□□□□ -0.79
SEMA3B-207ENST00000441915 PANO1I0J062 215 aa10.13□□□□□ -0.79
SEMA3B-207ENST00000441915 A8MU10 97 aa10.12□□□□□ -0.79
SEMA3B-207ENST00000441915 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
SEMA3B-207ENST00000441915 MDFIQ99750 246 aa10.12□□□□□ -0.79
SEMA3B-207ENST00000441915 Q5VV11 94 aa10.11□□□□□ -0.79
SEMA3B-207ENST00000441915 Q6ZRN7 208 aaPredicted RBP10.11□□□□□ -0.79
SEMA3B-207ENST00000441915 H0Y9P7 68 aa10.1□□□□□ -0.79
SEMA3B-207ENST00000441915 H3BPC8 53 aa10.09□□□□□ -0.79
SEMA3B-207ENST00000441915 NUPR2A6NF83 97 aa10.09□□□□□ -0.79
SEMA3B-207ENST00000441915 IGLV9-49A0A0B4J1Y8 123 aa10.06□□□□□ -0.8
SEMA3B-207ENST00000441915 KTN1-AS1Q86SY8 53 aa10.06□□□□□ -0.8
SEMA3B-207ENST00000441915 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
SEMA3B-207ENST00000441915 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
SEMA3B-207ENST00000441915 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
SEMA3B-207ENST00000441915 CHKB-CPT1BH3BT56 60 aa10.04□□□□□ -0.8
SEMA3B-207ENST00000441915 SPANXA2-OT1Q8N9U9 137 aa10.03□□□□□ -0.8
SEMA3B-207ENST00000441915 LIMD2Q9BT23 127 aa10.02□□□□□ -0.81
SEMA3B-207ENST00000441915 RBM12B-AS1Q9P1G2 102 aa10.01□□□□□ -0.81
SEMA3B-207ENST00000441915 Q8N9P0 234 aaPredicted RBP10.01□□□□□ -0.81
SEMA3B-207ENST00000441915 LINC00483Q53H64 154 aa9.99□□□□□ -0.81
SEMA3B-207ENST00000441915 Q96NJ1 140 aa9.99□□□□□ -0.81
SEMA3B-207ENST00000441915 A0A087WTM6 91 aa9.98□□□□□ -0.81
SEMA3B-207ENST00000441915 ZNF706Q9Y5V0 76 aaPredicted RBP9.98□□□□□ -0.81
SEMA3B-207ENST00000441915 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
SEMA3B-207ENST00000441915 PRR15LQ9BU68 103 aa9.97□□□□□ -0.81
SEMA3B-207ENST00000441915 STARD9Q9P2P6 4700 aa9.96□□□□□ -0.81
SEMA3B-207ENST00000441915 MOBPQ13875 183 aa9.96□□□□□ -0.82
SEMA3B-207ENST00000441915 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.82
SEMA3B-207ENST00000441915 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
SEMA3B-207ENST00000441915 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
SEMA3B-207ENST00000441915 VPS13DQ5THJ4 4388 aa9.94□□□□□ -0.82
SEMA3B-207ENST00000441915 IGLV5-52A0A0A0MRZ9 124 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 RTL8CO15255 209 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 NDUFS5O43920 106 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 LCA10Q71F78 164 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 HECTD4Q9Y4D8 3996 aa9.93□□□□□ -0.82
SEMA3B-207ENST00000441915 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
SEMA3B-207ENST00000441915 FRAS1Q86XX4 4008 aa9.92□□□□□ -0.82
SEMA3B-207ENST00000441915 Q75L30 129 aa9.91□□□□□ -0.82
SEMA3B-207ENST00000441915 ZNF861PO60384 105 aa9.9□□□□□ -0.83
SEMA3B-207ENST00000441915 IGHV6-1A0A0B4J1U7 121 aa9.89□□□□□ -0.83
SEMA3B-207ENST00000441915 A6NN06 94 aa9.89□□□□□ -0.83
SEMA3B-207ENST00000441915 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms