RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 Q6ZRX8 168 aa7.66□□□□□ -1.18
LTBR-203ENST00000441074 ST20-AS1Q8NBB2 130 aa7.66□□□□□ -1.18
LTBR-203ENST00000441074 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
LTBR-203ENST00000441074 SERTAD4-AS1Q5TG53 156 aa7.65□□□□□ -1.18
LTBR-203ENST00000441074 DEFB131BA0A096LNP1 70 aa7.64□□□□□ -1.19
LTBR-203ENST00000441074 LINC01556Q5JQF7 62 aa7.64□□□□□ -1.19
LTBR-203ENST00000441074 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
LTBR-203ENST00000441074 Q9BRP9 147 aa7.64□□□□□ -1.19
LTBR-203ENST00000441074 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
LTBR-203ENST00000441074 SYCNQ0VAF6 134 aa7.64□□□□□ -1.19
LTBR-203ENST00000441074 PRR4Q16378 134 aa7.63□□□□□ -1.19
LTBR-203ENST00000441074 PLA2G2DQ9UNK4 145 aa7.62□□□□□ -1.19
LTBR-203ENST00000441074 A8MUN3 132 aa7.62□□□□□ -1.19
LTBR-203ENST00000441074 SPRR1AP35321 89 aa7.61□□□□□ -1.19
LTBR-203ENST00000441074 IGKV2D-24A0A075B6R9 120 aa7.61□□□□□ -1.19
LTBR-203ENST00000441074 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
LTBR-203ENST00000441074 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
LTBR-203ENST00000441074 IGLV1-50A0A075B6I6 118 aa7.6□□□□□ -1.19
LTBR-203ENST00000441074 MP68P56378 58 aa7.6□□□□□ -1.19
LTBR-203ENST00000441074 IGLV5-37A0A075B6J1 123 aa7.59□□□□□ -1.19
LTBR-203ENST00000441074 RPL37AP8A6NKH3 93 aa7.59□□□□□ -1.19
LTBR-203ENST00000441074 Q5VV11 94 aa7.59□□□□□ -1.19
LTBR-203ENST00000441074 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
LTBR-203ENST00000441074 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
LTBR-203ENST00000441074 DNAH10OSP0CZ25 163 aa7.56□□□□□ -1.2
LTBR-203ENST00000441074 UBE2BP63146 152 aa7.56□□□□□ -1.2
LTBR-203ENST00000441074 CD164Q04900 197 aa7.56□□□□□ -1.2
LTBR-203ENST00000441074 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
LTBR-203ENST00000441074 LINC00208Q96KT6 92 aa7.55□□□□□ -1.2
LTBR-203ENST00000441074 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
LTBR-203ENST00000441074 H3BPC8 53 aa7.55□□□□□ -1.2
LTBR-203ENST00000441074 UBE2AP49459 152 aa7.55□□□□□ -1.2
LTBR-203ENST00000441074 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
LTBR-203ENST00000441074 Q8N9P0 234 aaPredicted RBP7.55□□□□□ -1.2
LTBR-203ENST00000441074 FAM168BA1KXE4 195 aa7.53□□□□□ -1.2
LTBR-203ENST00000441074 A8MU10 97 aa7.53□□□□□ -1.2
LTBR-203ENST00000441074 KRTAP29-1A8MX34 341 aaPredicted RBP7.52□□□□□ -1.2
LTBR-203ENST00000441074 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
LTBR-203ENST00000441074 DEFB116Q30KQ4 102 aa7.52□□□□□ -1.21
LTBR-203ENST00000441074 IGFL1Q6UW32 110 aa7.52□□□□□ -1.21
LTBR-203ENST00000441074 LINC00588Q9Y4M8 146 aa7.52□□□□□ -1.21
LTBR-203ENST00000441074 KRTAP7-1Q8IUC3 87 aa7.51□□□□□ -1.21
LTBR-203ENST00000441074 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
LTBR-203ENST00000441074 H0Y9P7 68 aa7.5□□□□□ -1.21
LTBR-203ENST00000441074 C16orf90A8MZG2 172 aa7.5□□□□□ -1.21
LTBR-203ENST00000441074 IGLV8-61A0A075B6I0 122 aa7.49□□□□□ -1.21
LTBR-203ENST00000441074 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
LTBR-203ENST00000441074 A0A1W2PNN7 141 aa7.49□□□□□ -1.21
LTBR-203ENST00000441074 A0A087WSZ3 146 aa7.48□□□□□ -1.21
LTBR-203ENST00000441074 PRR15LQ9BU68 103 aa7.48□□□□□ -1.21
LTBR-203ENST00000441074 REG3GQ6UW15 175 aa7.47□□□□□ -1.21
LTBR-203ENST00000441074 DNAH10Q8IVF4 4471 aa7.47□□□□□ -1.21
LTBR-203ENST00000441074 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
LTBR-203ENST00000441074 KTN1-AS1Q86SY8 53 aa7.47□□□□□ -1.21
LTBR-203ENST00000441074 C9orf163Q8N9P6 203 aa7.47□□□□□ -1.21
LTBR-203ENST00000441074 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
LTBR-203ENST00000441074 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.21
LTBR-203ENST00000441074 Q75L30 129 aa7.46□□□□□ -1.21
LTBR-203ENST00000441074 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
LTBR-203ENST00000441074 CASC10Q5T4H9 136 aa7.46□□□□□ -1.22
LTBR-203ENST00000441074 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.22
LTBR-203ENST00000441074 LOC101927531A0A1B0GV80 90 aa7.45□□□□□ -1.22
LTBR-203ENST00000441074 CNBPP62633 177 aaKnown RBP7.44□□□□□ -1.22
LTBR-203ENST00000441074 LCA10Q71F78 164 aa7.44□□□□□ -1.22
LTBR-203ENST00000441074 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
LTBR-203ENST00000441074 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
LTBR-203ENST00000441074 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
LTBR-203ENST00000441074 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
LTBR-203ENST00000441074 A8MWP4 228 aa7.41□□□□□ -1.22
LTBR-203ENST00000441074 COA5Q86WW8 74 aa7.41□□□□□ -1.22
LTBR-203ENST00000441074 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
LTBR-203ENST00000441074 NDUFS5O43920 106 aa7.41□□□□□ -1.22
LTBR-203ENST00000441074 A6NED7 52 aa7.4□□□□□ -1.22
LTBR-203ENST00000441074 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
LTBR-203ENST00000441074 A6NN06 94 aa7.39□□□□□ -1.23
LTBR-203ENST00000441074 PHF5AQ7RTV0 110 aaKnown RBP7.39□□□□□ -1.23
LTBR-203ENST00000441074 LINC00472Q9H8W2 130 aa7.39□□□□□ -1.23
LTBR-203ENST00000441074 CDC42SE1Q9NRR8 79 aa7.38□□□□□ -1.23
LTBR-203ENST00000441074 APLNQ9ULZ1 77 aa7.38□□□□□ -1.23
LTBR-203ENST00000441074 KMT2AQ03164 3969 aa7.37□□□□□ -1.23
LTBR-203ENST00000441074 PRLHP81277 87 aa7.37□□□□□ -1.23
LTBR-203ENST00000441074 UBE2DNLQ8IWF7 75 aa7.36□□□□□ -1.23
LTBR-203ENST00000441074 DYNC2H1Q8NCM8 4307 aaKnown RBP7.35□□□□□ -1.23
LTBR-203ENST00000441074 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
LTBR-203ENST00000441074 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.23
LTBR-203ENST00000441074 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
LTBR-203ENST00000441074 NUPR2A6NF83 97 aa7.34□□□□□ -1.23
LTBR-203ENST00000441074 SPRR1BP22528 89 aa7.34□□□□□ -1.23
LTBR-203ENST00000441074 A0A096LNI7 61 aa7.31□□□□□ -1.24
LTBR-203ENST00000441074 H0Y9J4 135 aa7.31□□□□□ -1.24
LTBR-203ENST00000441074 TP53AIP1Q9HCN2 124 aa7.3□□□□□ -1.24
LTBR-203ENST00000441074 MOBPQ13875 183 aa7.29□□□□□ -1.24
LTBR-203ENST00000441074 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
LTBR-203ENST00000441074 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
LTBR-203ENST00000441074 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
LTBR-203ENST00000441074 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
LTBR-203ENST00000441074 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
LTBR-203ENST00000441074 IGKV2-24A0A0C4DH68 120 aa7.28□□□□□ -1.24
LTBR-203ENST00000441074 Q6ZR54 194 aa7.27□□□□□ -1.25
LTBR-203ENST00000441074 SPINK7P58062 85 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms