RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 PHF5AQ7RTV0 110 aaKnown RBP11.6□□□□□ -0.55
PTPRJ-202ENST00000440289 LINC00208Q96KT6 92 aa11.6□□□□□ -0.55
PTPRJ-202ENST00000440289 HCG22E2RYF7 251 aa11.59□□□□□ -0.55
PTPRJ-202ENST00000440289 PRO0628Q9UI54 55 aa11.59□□□□□ -0.55
PTPRJ-202ENST00000440289 WIPF1O43516 503 aa11.59□□□□□ -0.55
PTPRJ-202ENST00000440289 DNAH7Q8WXX0 4024 aa11.58□□□□□ -0.55
PTPRJ-202ENST00000440289 KRTAP4-16G5E9R7 235 aaPredicted RBP11.58□□□□□ -0.56
PTPRJ-202ENST00000440289 H0Y9J4 135 aa11.57□□□□□ -0.56
PTPRJ-202ENST00000440289 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
PTPRJ-202ENST00000440289 DNAH9Q9NYC9 4486 aa11.56□□□□□ -0.56
PTPRJ-202ENST00000440289 ATP5EP56381 51 aaPredicted RBP11.56□□□□□ -0.56
PTPRJ-202ENST00000440289 KRTAP1-5Q9BYS1 174 aa11.55□□□□□ -0.56
PTPRJ-202ENST00000440289 TNP2Q05952 138 aa11.54□□□□□ -0.56
PTPRJ-202ENST00000440289 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
PTPRJ-202ENST00000440289 SPRR1AP35321 89 aa11.51□□□□□ -0.57
PTPRJ-202ENST00000440289 IGLV9-49A0A0B4J1Y8 123 aa11.5□□□□□ -0.57
PTPRJ-202ENST00000440289 MP68P56378 58 aa11.5□□□□□ -0.57
PTPRJ-202ENST00000440289 KRTAP11-1Q8IUC1 163 aa11.5□□□□□ -0.57
PTPRJ-202ENST00000440289 SPRR4Q96PI1 79 aa11.48□□□□□ -0.57
PTPRJ-202ENST00000440289 DNAH3Q8TD57 4116 aa11.47□□□□□ -0.57
PTPRJ-202ENST00000440289 F8WDY8 70 aa11.45□□□□□ -0.58
PTPRJ-202ENST00000440289 CASC2Q6XLA1 102 aa11.45□□□□□ -0.58
PTPRJ-202ENST00000440289 hDV103S1A0JD37 113 aa11.44□□□□□ -0.58
PTPRJ-202ENST00000440289 K7EIL1 84 aa11.44□□□□□ -0.58
PTPRJ-202ENST00000440289 PLA2G2DQ9UNK4 145 aa11.44□□□□□ -0.58
PTPRJ-202ENST00000440289 PCOTHQ58A44 107 aa11.43□□□□□ -0.58
PTPRJ-202ENST00000440289 TGP01266 2768 aa11.43□□□□□ -0.58
PTPRJ-202ENST00000440289 NDUFS5O43920 106 aa11.43□□□□□ -0.58
PTPRJ-202ENST00000440289 H0Y9P7 68 aa11.42□□□□□ -0.58
PTPRJ-202ENST00000440289 DNAH1Q9P2D7 4330 aa11.42□□□□□ -0.58
PTPRJ-202ENST00000440289 IGLV5-37A0A075B6J1 123 aa11.4□□□□□ -0.58
PTPRJ-202ENST00000440289 C16orf90A8MZG2 172 aa11.4□□□□□ -0.58
PTPRJ-202ENST00000440289 A8MUN3 132 aa11.4□□□□□ -0.59
PTPRJ-202ENST00000440289 ANAPC11Q9NYG5 84 aa11.39□□□□□ -0.59
PTPRJ-202ENST00000440289 C1orf195Q5TG92 126 aa11.38□□□□□ -0.59
PTPRJ-202ENST00000440289 PLECQ15149 4684 aaKnown RBP11.36□□□□□ -0.59
PTPRJ-202ENST00000440289 PANO1I0J062 215 aa11.36□□□□□ -0.59
PTPRJ-202ENST00000440289 A8MU10 97 aa11.35□□□□□ -0.59
PTPRJ-202ENST00000440289 TRAV22A0A0B4J277 110 aa11.35□□□□□ -0.59
PTPRJ-202ENST00000440289 B9D2Q9BPU9 175 aa11.32□□□□□ -0.6
PTPRJ-202ENST00000440289 A0A1B0GW54 56 aa11.31□□□□□ -0.6
PTPRJ-202ENST00000440289 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
PTPRJ-202ENST00000440289 SPINK6Q6UWN8 80 aa11.31□□□□□ -0.6
PTPRJ-202ENST00000440289 PRR15Q8IV56 129 aa11.31□□□□□ -0.6
PTPRJ-202ENST00000440289 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
PTPRJ-202ENST00000440289 IGHV6-1A0A0B4J1U7 121 aa11.29□□□□□ -0.6
PTPRJ-202ENST00000440289 SPTSSBQ8NFR3 76 aa11.29□□□□□ -0.6
PTPRJ-202ENST00000440289 CHKB-CPT1BH3BT56 60 aa11.27□□□□□ -0.6
PTPRJ-202ENST00000440289 PRR15LQ9BU68 103 aa11.27□□□□□ -0.61
PTPRJ-202ENST00000440289 NDUFB1O75438 58 aa11.26□□□□□ -0.61
PTPRJ-202ENST00000440289 A8MWP4 228 aa11.24□□□□□ -0.61
PTPRJ-202ENST00000440289 MDFIQ99750 246 aa11.23□□□□□ -0.61
PTPRJ-202ENST00000440289 LCE6AA0A183 80 aa11.23□□□□□ -0.61
PTPRJ-202ENST00000440289 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
PTPRJ-202ENST00000440289 PRKDCP78527 4128 aaKnown RBP11.22□□□□□ -0.61
PTPRJ-202ENST00000440289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
PTPRJ-202ENST00000440289 KMT2AQ03164 3969 aa11.21□□□□□ -0.62
PTPRJ-202ENST00000440289 STARD9Q9P2P6 4700 aa11.21□□□□□ -0.62
PTPRJ-202ENST00000440289 MOBPQ13875 183 aa11.2□□□□□ -0.62
PTPRJ-202ENST00000440289 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
PTPRJ-202ENST00000440289 V9GYY9 64 aa11.19□□□□□ -0.62
PTPRJ-202ENST00000440289 KRTAP29-1A8MX34 341 aaPredicted RBP11.18□□□□□ -0.62
PTPRJ-202ENST00000440289 LINC00472Q9H8W2 130 aa11.18□□□□□ -0.62
PTPRJ-202ENST00000440289 C14orf177Q52M58 125 aa11.16□□□□□ -0.62
PTPRJ-202ENST00000440289 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
PTPRJ-202ENST00000440289 C9orf163Q8N9P6 203 aa11.16□□□□□ -0.62
PTPRJ-202ENST00000440289 Q1T7F1 81 aa11.16□□□□□ -0.62
PTPRJ-202ENST00000440289 RETNLBQ9BQ08 111 aa11.16□□□□□ -0.62
PTPRJ-202ENST00000440289 MEGF8Q7Z7M0 2845 aa11.14□□□□□ -0.63
PTPRJ-202ENST00000440289 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
PTPRJ-202ENST00000440289 DNHD1Q96M86 4753 aa11.14□□□□□ -0.63
PTPRJ-202ENST00000440289 A6NED7 52 aa11.14□□□□□ -0.63
PTPRJ-202ENST00000440289 PMAIP1Q13794 54 aa11.14□□□□□ -0.63
PTPRJ-202ENST00000440289 MMP24-AS1A0A0U1RRL7 71 aa11.13□□□□□ -0.63
PTPRJ-202ENST00000440289 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
PTPRJ-202ENST00000440289 IGLV8-61A0A075B6I0 122 aa11.12□□□□□ -0.63
PTPRJ-202ENST00000440289 COA5Q86WW8 74 aa11.12□□□□□ -0.63
PTPRJ-202ENST00000440289 NBDYA0A0U1RRE5 68 aa11.12□□□□□ -0.63
PTPRJ-202ENST00000440289 A0A087X002 238 aa11.09□□□□□ -0.63
PTPRJ-202ENST00000440289 NOTCH2NLQ7Z3S9 236 aa11.09□□□□□ -0.63
PTPRJ-202ENST00000440289 Q5VV11 94 aa11.08□□□□□ -0.64
PTPRJ-202ENST00000440289 CIRBP-AS1Q8TBR5 109 aa11.08□□□□□ -0.64
PTPRJ-202ENST00000440289 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
PTPRJ-202ENST00000440289 Q8N9P0 234 aaPredicted RBP11.07□□□□□ -0.64
PTPRJ-202ENST00000440289 CD164Q04900 197 aa11.06□□□□□ -0.64
PTPRJ-202ENST00000440289 C8orf17Q9NRJ1 99 aa11.04□□□□□ -0.64
PTPRJ-202ENST00000440289 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
PTPRJ-202ENST00000440289 SPRR1BP22528 89 aa11□□□□□ -0.65
PTPRJ-202ENST00000440289 DNAH2Q9P225 4427 aa10.99□□□□□ -0.65
PTPRJ-202ENST00000440289 RTL8CO15255 209 aa10.98□□□□□ -0.65
PTPRJ-202ENST00000440289 SEC61GP60059 68 aa10.97□□□□□ -0.65
PTPRJ-202ENST00000440289 Q96NJ1 140 aa10.96□□□□□ -0.66
PTPRJ-202ENST00000440289 LIMD2Q9BT23 127 aa10.96□□□□□ -0.66
PTPRJ-202ENST00000440289 VPS13DQ5THJ4 4388 aa10.96□□□□□ -0.66
PTPRJ-202ENST00000440289 A0A1B0GVX0 72 aa10.95□□□□□ -0.66
PTPRJ-202ENST00000440289 PRR26Q8N8Z3 221 aa10.95□□□□□ -0.66
PTPRJ-202ENST00000440289 SPANXA2-OT1Q8N9U9 137 aa10.95□□□□□ -0.66
PTPRJ-202ENST00000440289 A0A087WTM6 91 aa10.94□□□□□ -0.66
PTPRJ-202ENST00000440289 DNAH6Q9C0G6 4158 aa10.94□□□□□ -0.66
PTPRJ-202ENST00000440289 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms