RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 TLX1NBP0CAT3 122 aa4.22□□□□□ -1.73
BDNF-211ENST00000439476 FLNAP21333 2647 aaKnown RBP4.21□□□□□ -1.74
BDNF-211ENST00000439476 NBDYA0A0U1RRE5 68 aa4.21□□□□□ -1.74
BDNF-211ENST00000439476 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
BDNF-211ENST00000439476 LINC00612Q8N6U2 182 aa4.21□□□□□ -1.74
BDNF-211ENST00000439476 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.74
BDNF-211ENST00000439476 IGLV1-50A0A075B6I6 118 aa4.21□□□□□ -1.74
BDNF-211ENST00000439476 CELSR2Q9HCU4 2923 aa4.2□□□□□ -1.74
BDNF-211ENST00000439476 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
BDNF-211ENST00000439476 ITPR1Q14643 2758 aa4.19□□□□□ -1.74
BDNF-211ENST00000439476 UQCR11O14957 56 aa4.19□□□□□ -1.74
BDNF-211ENST00000439476 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
BDNF-211ENST00000439476 CHD6Q8TD26 2715 aa4.18□□□□□ -1.74
BDNF-211ENST00000439476 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
BDNF-211ENST00000439476 RTL8CO15255 209 aa4.18□□□□□ -1.74
BDNF-211ENST00000439476 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
BDNF-211ENST00000439476 ITPR3Q14573 2671 aa4.18□□□□□ -1.74
BDNF-211ENST00000439476 COA5Q86WW8 74 aa4.17□□□□□ -1.74
BDNF-211ENST00000439476 ATRQ13535 2644 aa4.17□□□□□ -1.74
BDNF-211ENST00000439476 K7EQZ3 153 aa4.16□□□□□ -1.74
BDNF-211ENST00000439476 USP24Q9UPU5 2620 aa4.16□□□□□ -1.74
BDNF-211ENST00000439476 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
BDNF-211ENST00000439476 TYMSOSQ8TAI1 123 aa4.16□□□□□ -1.74
BDNF-211ENST00000439476 GCN1Q92616 2671 aaKnown RBP4.16□□□□□ -1.74
BDNF-211ENST00000439476 Q75L30 129 aa4.16□□□□□ -1.74
BDNF-211ENST00000439476 C8orf17Q9NRJ1 99 aa4.16□□□□□ -1.74
BDNF-211ENST00000439476 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
BDNF-211ENST00000439476 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
BDNF-211ENST00000439476 Q8N377 158 aa4.14□□□□□ -1.75
BDNF-211ENST00000439476 IGLV5-37A0A075B6J1 123 aa4.14□□□□□ -1.75
BDNF-211ENST00000439476 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
BDNF-211ENST00000439476 C15orf56Q8N910 161 aa4.13□□□□□ -1.75
BDNF-211ENST00000439476 Q8NDZ9 215 aa4.13□□□□□ -1.75
BDNF-211ENST00000439476 IGLV5-48A0A075B6I7 105 aa4.13□□□□□ -1.75
BDNF-211ENST00000439476 ZNF861PO60384 105 aa4.13□□□□□ -1.75
BDNF-211ENST00000439476 IGSF10Q6WRI0 2623 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 NBEAL2Q6ZNJ1 2754 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 FAM168BA1KXE4 195 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 KRTAP24-1Q3LI83 254 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 C9orf163Q8N9P6 203 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 CFAP46Q8IYW2 2715 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 TEX15Q9BXT5 2789 aa4.12□□□□□ -1.75
BDNF-211ENST00000439476 CNBPP62633 177 aaKnown RBP4.11□□□□□ -1.75
BDNF-211ENST00000439476 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
BDNF-211ENST00000439476 PLA2G1BP04054 148 aaKnown RBP4.11□□□□□ -1.75
BDNF-211ENST00000439476 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
BDNF-211ENST00000439476 Q96NJ1 140 aa4.11□□□□□ -1.75
BDNF-211ENST00000439476 KRTAP10-3P60369 221 aa4.1□□□□□ -1.75
BDNF-211ENST00000439476 CR1P17927 2039 aa4.1□□□□□ -1.75
BDNF-211ENST00000439476 A0A1W2PNM2 257 aa4.1□□□□□ -1.75
BDNF-211ENST00000439476 KRTAP1-3Q8IUG1 177 aa4.1□□□□□ -1.75
BDNF-211ENST00000439476 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
BDNF-211ENST00000439476 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
BDNF-211ENST00000439476 FLNCQ14315 2725 aa4.09□□□□□ -1.75
BDNF-211ENST00000439476 SPINK7P58062 85 aa4.09□□□□□ -1.75
BDNF-211ENST00000439476 UNC79Q9P2D8 2635 aa4.09□□□□□ -1.76
BDNF-211ENST00000439476 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
BDNF-211ENST00000439476 A0A1W2PNN7 141 aa4.08□□□□□ -1.76
BDNF-211ENST00000439476 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
BDNF-211ENST00000439476 CHTF8P0CG12 524 aa4.07□□□□□ -1.76
BDNF-211ENST00000439476 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
BDNF-211ENST00000439476 SPRR4Q96PI1 79 aa4.07□□□□□ -1.76
BDNF-211ENST00000439476 LINC00304Q8N9R0 145 aa4.06□□□□□ -1.76
BDNF-211ENST00000439476 HRNRQ86YZ3 2850 aaPredicted RBP4.06□□□□□ -1.76
BDNF-211ENST00000439476 STAB1Q9NY15 2570 aa4.06□□□□□ -1.76
BDNF-211ENST00000439476 SPINT4Q6UDR6 99 aa4.06□□□□□ -1.76
BDNF-211ENST00000439476 MGAM2Q2M2H8 2515 aa4.05□□□□□ -1.76
BDNF-211ENST00000439476 KRTAP1-1Q07627 177 aa4.05□□□□□ -1.76
BDNF-211ENST00000439476 A0A087WTM6 91 aa4.05□□□□□ -1.76
BDNF-211ENST00000439476 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
BDNF-211ENST00000439476 ROMO1P60602 79 aa4.04□□□□□ -1.76
BDNF-211ENST00000439476 DSCR10P59022 87 aa4.03□□□□□ -1.76
BDNF-211ENST00000439476 ZANQ9Y493 2812 aa4.03□□□□□ -1.76
BDNF-211ENST00000439476 UTP20O75691 2785 aaKnown RBP4.03□□□□□ -1.76
BDNF-211ENST00000439476 K7EIL1 84 aa4.03□□□□□ -1.76
BDNF-211ENST00000439476 CASC10Q5T4H9 136 aa4.03□□□□□ -1.76
BDNF-211ENST00000439476 IGLV7-46A0A075B6I9 117 aa4.02□□□□□ -1.77
BDNF-211ENST00000439476 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
BDNF-211ENST00000439476 Q6ZR54 194 aa4.02□□□□□ -1.77
BDNF-211ENST00000439476 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
BDNF-211ENST00000439476 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
BDNF-211ENST00000439476 HELZ2Q9BYK8 2649 aaKnown RBP4.01□□□□□ -1.77
BDNF-211ENST00000439476 BAHCC1Q9P281 2608 aa4□□□□□ -1.77
BDNF-211ENST00000439476 PSORS1C2Q9UIG4 136 aa4□□□□□ -1.77
BDNF-211ENST00000439476 ANK2Q01484 3957 aa4□□□□□ -1.77
BDNF-211ENST00000439476 APLNQ9ULZ1 77 aa4□□□□□ -1.77
BDNF-211ENST00000439476 UBR5O95071 2799 aaPredicted RBP3.99□□□□□ -1.77
BDNF-211ENST00000439476 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
BDNF-211ENST00000439476 SPRR1AP35321 89 aa3.98□□□□□ -1.77
BDNF-211ENST00000439476 SPRR1BP22528 89 aa3.98□□□□□ -1.77
BDNF-211ENST00000439476 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
BDNF-211ENST00000439476 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
BDNF-211ENST00000439476 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
BDNF-211ENST00000439476 KRTAP26-1Q6PEX3 210 aa3.96□□□□□ -1.77
BDNF-211ENST00000439476 FBN2P35556 2912 aa3.96□□□□□ -1.77
BDNF-211ENST00000439476 KMT2BQ9UMN6 2715 aaPredicted RBP3.96□□□□□ -1.78
BDNF-211ENST00000439476 ANK3Q12955 4377 aaKnown RBP3.95□□□□□ -1.78
BDNF-211ENST00000439476 TEP1Q99973 2627 aaKnown RBP3.95□□□□□ -1.78
BDNF-211ENST00000439476 NF1P21359 2839 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms