RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
SCLT1-202ENST00000439369 LAMTOR3Q9UHA4 124 aa7.56□□□□□ -1.2
SCLT1-202ENST00000439369 LINC01600Q96MT4 127 aa7.55□□□□□ -1.2
SCLT1-202ENST00000439369 FAT1Q14517 4588 aa7.55□□□□□ -1.2
SCLT1-202ENST00000439369 H3BMG7 143 aa7.54□□□□□ -1.2
SCLT1-202ENST00000439369 OXTP01178 125 aa7.54□□□□□ -1.2
SCLT1-202ENST00000439369 C9JAW5 83 aa7.53□□□□□ -1.2
SCLT1-202ENST00000439369 H3BT86 120 aa7.53□□□□□ -1.2
SCLT1-202ENST00000439369 BAALC-AS2P0C853 105 aa7.53□□□□□ -1.2
SCLT1-202ENST00000439369 UBE2V1Q13404 147 aa7.53□□□□□ -1.2
SCLT1-202ENST00000439369 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
SCLT1-202ENST00000439369 HERC2O95714 4834 aa7.52□□□□□ -1.21
SCLT1-202ENST00000439369 F8WEM9 126 aa7.52□□□□□ -1.21
SCLT1-202ENST00000439369 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
SCLT1-202ENST00000439369 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
SCLT1-202ENST00000439369 IGLV8-61A0A075B6I0 122 aa7.5□□□□□ -1.21
SCLT1-202ENST00000439369 A0A087X002 238 aa7.5□□□□□ -1.21
SCLT1-202ENST00000439369 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-202ENST00000439369 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
SCLT1-202ENST00000439369 Q8NBF4 154 aa7.5□□□□□ -1.21
SCLT1-202ENST00000439369 KRTAP29-1A8MX34 341 aaPredicted RBP7.49□□□□□ -1.21
SCLT1-202ENST00000439369 KRTAP13-2Q52LG2 175 aa7.49□□□□□ -1.21
SCLT1-202ENST00000439369 PRR26Q8N8Z3 221 aa7.49□□□□□ -1.21
SCLT1-202ENST00000439369 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
SCLT1-202ENST00000439369 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
SCLT1-202ENST00000439369 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
SCLT1-202ENST00000439369 IGLV9-49A0A0B4J1Y8 123 aa7.47□□□□□ -1.21
SCLT1-202ENST00000439369 KRTAP10-8P60410 259 aa7.47□□□□□ -1.21
SCLT1-202ENST00000439369 MOBPQ13875 183 aa7.47□□□□□ -1.21
SCLT1-202ENST00000439369 Q6JHZ5 121 aa7.47□□□□□ -1.21
SCLT1-202ENST00000439369 A0A1B0GV90 55 aa7.46□□□□□ -1.22
SCLT1-202ENST00000439369 F8W1H4 67 aa7.46□□□□□ -1.22
SCLT1-202ENST00000439369 JMJD7-PLA2G4BH0Y9G9 81 aa7.46□□□□□ -1.22
SCLT1-202ENST00000439369 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.22
SCLT1-202ENST00000439369 PRO0461Q9UI25 63 aa7.46□□□□□ -1.22
SCLT1-202ENST00000439369 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.22
SCLT1-202ENST00000439369 C21orf62-AS1Q17RA5 79 aa7.43□□□□□ -1.22
SCLT1-202ENST00000439369 OBSCN-AS1Q96MR7 158 aa7.43□□□□□ -1.22
SCLT1-202ENST00000439369 MT1HL1P0DM35 61 aa7.42□□□□□ -1.22
SCLT1-202ENST00000439369 RBM3P98179 157 aaKnown RBP7.42□□□□□ -1.22
SCLT1-202ENST00000439369 CD164Q04900 197 aa7.42□□□□□ -1.22
SCLT1-202ENST00000439369 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
SCLT1-202ENST00000439369 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
SCLT1-202ENST00000439369 PDE6GP18545 87 aa7.41□□□□□ -1.22
SCLT1-202ENST00000439369 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.22
SCLT1-202ENST00000439369 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.22
SCLT1-202ENST00000439369 IGFL1Q6UW32 110 aa7.4□□□□□ -1.22
SCLT1-202ENST00000439369 LINC00304Q8N9R0 145 aa7.4□□□□□ -1.22
SCLT1-202ENST00000439369 DSCR8Q96T75 97 aa7.4□□□□□ -1.22
SCLT1-202ENST00000439369 LOC110117498A0A087WWA1 95 aa7.38□□□□□ -1.23
SCLT1-202ENST00000439369 SPINK1P00995 79 aa7.38□□□□□ -1.23
SCLT1-202ENST00000439369 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
SCLT1-202ENST00000439369 Q6Q795 121 aa7.38□□□□□ -1.23
SCLT1-202ENST00000439369 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
SCLT1-202ENST00000439369 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
SCLT1-202ENST00000439369 A0A1B0GW54 56 aa7.35□□□□□ -1.23
SCLT1-202ENST00000439369 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
SCLT1-202ENST00000439369 A0A1B0GV72 72 aa7.34□□□□□ -1.23
SCLT1-202ENST00000439369 Q6ZQT0 140 aa7.34□□□□□ -1.23
SCLT1-202ENST00000439369 Q5XG85 94 aa7.33□□□□□ -1.24
SCLT1-202ENST00000439369 LIMD2Q9BT23 127 aa7.33□□□□□ -1.24
SCLT1-202ENST00000439369 C14orf132Q9NPU4 83 aa7.33□□□□□ -1.24
SCLT1-202ENST00000439369 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
SCLT1-202ENST00000439369 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
SCLT1-202ENST00000439369 A0A1W2PNM2 257 aa7.32□□□□□ -1.24
SCLT1-202ENST00000439369 CCKP06307 115 aa7.32□□□□□ -1.24
SCLT1-202ENST00000439369 ETDBQ3ZM63 59 aa7.32□□□□□ -1.24
SCLT1-202ENST00000439369 A0A0G2JQZ4 141 aa7.31□□□□□ -1.24
SCLT1-202ENST00000439369 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
SCLT1-202ENST00000439369 SS18L2Q9UHA2 77 aa7.3□□□□□ -1.24
SCLT1-202ENST00000439369 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
SCLT1-202ENST00000439369 HRCT1Q6UXD1 115 aa7.28□□□□□ -1.24
SCLT1-202ENST00000439369 VPS25Q9BRG1 176 aa7.27□□□□□ -1.25
SCLT1-202ENST00000439369 MYCBP2O75592 4640 aa7.27□□□□□ -1.25
SCLT1-202ENST00000439369 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
SCLT1-202ENST00000439369 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
SCLT1-202ENST00000439369 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
SCLT1-202ENST00000439369 A0A087WSZ3 146 aa7.25□□□□□ -1.25
SCLT1-202ENST00000439369 ACYP1P07311 99 aa7.21□□□□□ -1.26
SCLT1-202ENST00000439369 TNXBP22105 4242 aa7.21□□□□□ -1.26
SCLT1-202ENST00000439369 DMBT1Q9UGM3 2413 aaPredicted RBP7.2□□□□□ -1.26
SCLT1-202ENST00000439369 FAM240AA0A1B0GVK7 77 aa7.2□□□□□ -1.26
SCLT1-202ENST00000439369 FP248Q71RG6 208 aaPredicted RBP7.2□□□□□ -1.26
SCLT1-202ENST00000439369 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
SCLT1-202ENST00000439369 J3QR89 54 aa7.18□□□□□ -1.26
SCLT1-202ENST00000439369 NREPQ16612 68 aa7.16□□□□□ -1.26
SCLT1-202ENST00000439369 LINC00472Q9H8W2 130 aa7.16□□□□□ -1.26
SCLT1-202ENST00000439369 J3KT08 172 aa7.15□□□□□ -1.26
SCLT1-202ENST00000439369 Q96NJ1 140 aa7.15□□□□□ -1.26
SCLT1-202ENST00000439369 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
SCLT1-202ENST00000439369 LINC00846Q9NV44 126 aa7.14□□□□□ -1.27
SCLT1-202ENST00000439369 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
SCLT1-202ENST00000439369 Q6ZVQ6 151 aa7.12□□□□□ -1.27
SCLT1-202ENST00000439369 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
SCLT1-202ENST00000439369 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
SCLT1-202ENST00000439369 K7ERU9 68 aa7.1□□□□□ -1.27
SCLT1-202ENST00000439369 IGKV4-1P06312 121 aa7.1□□□□□ -1.27
SCLT1-202ENST00000439369 PRR4Q16378 134 aa7.1□□□□□ -1.27
SCLT1-202ENST00000439369 SIGMAR1Q99720 223 aa7.08□□□□□ -1.28
SCLT1-202ENST00000439369 BPY2O14599 106 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms