RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
PCNX3-202ENST00000439247 CSMD3Q7Z407 3707 aa8.65□□□□□ -1.02
PCNX3-202ENST00000439247 RPL37AP61513 92 aaKnown RBP8.64□□□□□ -1.03
PCNX3-202ENST00000439247 SPRR4Q96PI1 79 aa8.64□□□□□ -1.03
PCNX3-202ENST00000439247 PSCAO43653 123 aa8.63□□□□□ -1.03
PCNX3-202ENST00000439247 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
PCNX3-202ENST00000439247 TRAV22A0A0B4J277 110 aa8.63□□□□□ -1.03
PCNX3-202ENST00000439247 HCG22E2RYF7 251 aa8.63□□□□□ -1.03
PCNX3-202ENST00000439247 LINC00476Q8WZB0 136 aa8.63□□□□□ -1.03
PCNX3-202ENST00000439247 STAB2Q8WWQ8 2551 aa8.62□□□□□ -1.03
PCNX3-202ENST00000439247 Q1T7F1 81 aa8.61□□□□□ -1.03
PCNX3-202ENST00000439247 SPRR1AP35321 89 aa8.6□□□□□ -1.03
PCNX3-202ENST00000439247 A8MUN3 132 aa8.6□□□□□ -1.03
PCNX3-202ENST00000439247 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
PCNX3-202ENST00000439247 IGFL1Q6UW32 110 aa8.58□□□□□ -1.04
PCNX3-202ENST00000439247 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
PCNX3-202ENST00000439247 A0A087WSZ3 146 aa8.58□□□□□ -1.04
PCNX3-202ENST00000439247 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
PCNX3-202ENST00000439247 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
PCNX3-202ENST00000439247 PRLHP81277 87 aa8.57□□□□□ -1.04
PCNX3-202ENST00000439247 DNAH10Q8IVF4 4471 aa8.56□□□□□ -1.04
PCNX3-202ENST00000439247 H3BNG1 76 aa8.56□□□□□ -1.04
PCNX3-202ENST00000439247 PRR15Q8IV56 129 aa8.56□□□□□ -1.04
PCNX3-202ENST00000439247 A0A1B0GW54 56 aa8.55□□□□□ -1.04
PCNX3-202ENST00000439247 TLX1NBP0CAT3 122 aa8.55□□□□□ -1.04
PCNX3-202ENST00000439247 LYSTQ99698 3801 aa8.55□□□□□ -1.04
PCNX3-202ENST00000439247 PLA2G2DQ9UNK4 145 aa8.54□□□□□ -1.04
PCNX3-202ENST00000439247 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
PCNX3-202ENST00000439247 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
PCNX3-202ENST00000439247 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
PCNX3-202ENST00000439247 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
PCNX3-202ENST00000439247 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
PCNX3-202ENST00000439247 PMAIP1Q13794 54 aa8.51□□□□□ -1.05
PCNX3-202ENST00000439247 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
PCNX3-202ENST00000439247 FBN3Q75N90 2809 aa8.5□□□□□ -1.05
PCNX3-202ENST00000439247 DNAH10OSP0CZ25 163 aa8.5□□□□□ -1.05
PCNX3-202ENST00000439247 MP68P56378 58 aa8.5□□□□□ -1.05
PCNX3-202ENST00000439247 B9D2Q9BPU9 175 aa8.5□□□□□ -1.05
PCNX3-202ENST00000439247 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
PCNX3-202ENST00000439247 Q5VV11 94 aa8.49□□□□□ -1.05
PCNX3-202ENST00000439247 A0A096LNI7 61 aa8.48□□□□□ -1.05
PCNX3-202ENST00000439247 H0Y9P7 68 aa8.48□□□□□ -1.05
PCNX3-202ENST00000439247 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
PCNX3-202ENST00000439247 TGP01266 2768 aa8.47□□□□□ -1.05
PCNX3-202ENST00000439247 TENM2Q9NT68 2774 aa8.47□□□□□ -1.05
PCNX3-202ENST00000439247 NDUFB1O75438 58 aa8.46□□□□□ -1.06
PCNX3-202ENST00000439247 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
PCNX3-202ENST00000439247 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
PCNX3-202ENST00000439247 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
PCNX3-202ENST00000439247 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
PCNX3-202ENST00000439247 UBE2AP49459 152 aa8.43□□□□□ -1.06
PCNX3-202ENST00000439247 Q8N9P0 234 aaPredicted RBP8.43□□□□□ -1.06
PCNX3-202ENST00000439247 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
PCNX3-202ENST00000439247 DNAH7Q8WXX0 4024 aa8.42□□□□□ -1.06
PCNX3-202ENST00000439247 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
PCNX3-202ENST00000439247 PLECQ15149 4684 aaKnown RBP8.41□□□□□ -1.06
PCNX3-202ENST00000439247 CHTF8P0CG12 524 aa8.4□□□□□ -1.06
PCNX3-202ENST00000439247 C16orf90A8MZG2 172 aa8.4□□□□□ -1.07
PCNX3-202ENST00000439247 CD164Q04900 197 aa8.4□□□□□ -1.07
PCNX3-202ENST00000439247 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
PCNX3-202ENST00000439247 PHF5AQ7RTV0 110 aaKnown RBP8.39□□□□□ -1.07
PCNX3-202ENST00000439247 PCOTHQ58A44 107 aa8.38□□□□□ -1.07
PCNX3-202ENST00000439247 H0Y9J4 135 aa8.38□□□□□ -1.07
PCNX3-202ENST00000439247 DYNC2H1Q8NCM8 4307 aaKnown RBP8.38□□□□□ -1.07
PCNX3-202ENST00000439247 IGLV8-61A0A075B6I0 122 aa8.37□□□□□ -1.07
PCNX3-202ENST00000439247 C9orf163Q8N9P6 203 aa8.36□□□□□ -1.07
PCNX3-202ENST00000439247 LINC00472Q9H8W2 130 aa8.36□□□□□ -1.07
PCNX3-202ENST00000439247 A8MWP4 228 aa8.36□□□□□ -1.07
PCNX3-202ENST00000439247 KRTAP1-5Q9BYS1 174 aa8.36□□□□□ -1.07
PCNX3-202ENST00000439247 LCA10Q71F78 164 aa8.35□□□□□ -1.07
PCNX3-202ENST00000439247 COA5Q86WW8 74 aa8.35□□□□□ -1.07
PCNX3-202ENST00000439247 PRR26Q8N8Z3 221 aa8.35□□□□□ -1.07
PCNX3-202ENST00000439247 SPANXA2-OT1Q8N9U9 137 aa8.35□□□□□ -1.07
PCNX3-202ENST00000439247 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
PCNX3-202ENST00000439247 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
PCNX3-202ENST00000439247 A6NED7 52 aa8.31□□□□□ -1.08
PCNX3-202ENST00000439247 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
PCNX3-202ENST00000439247 H3BPC8 53 aa8.28□□□□□ -1.08
PCNX3-202ENST00000439247 IGLV7-46A0A075B6I9 117 aa8.26□□□□□ -1.09
PCNX3-202ENST00000439247 IGLV9-49A0A0B4J1Y8 123 aa8.26□□□□□ -1.09
PCNX3-202ENST00000439247 APLNQ9ULZ1 77 aa8.26□□□□□ -1.09
PCNX3-202ENST00000439247 PANO1I0J062 215 aa8.25□□□□□ -1.09
PCNX3-202ENST00000439247 Q75L30 129 aa8.25□□□□□ -1.09
PCNX3-202ENST00000439247 KMT2AQ03164 3969 aa8.24□□□□□ -1.09
PCNX3-202ENST00000439247 NDUFS5O43920 106 aa8.23□□□□□ -1.09
PCNX3-202ENST00000439247 A0A0A0MQY5 61 aa8.23□□□□□ -1.09
PCNX3-202ENST00000439247 SPRR1BP22528 89 aa8.23□□□□□ -1.09
PCNX3-202ENST00000439247 Q96NJ1 140 aa8.23□□□□□ -1.09
PCNX3-202ENST00000439247 VPS13DQ5THJ4 4388 aa8.22□□□□□ -1.09
PCNX3-202ENST00000439247 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
PCNX3-202ENST00000439247 KTN1-AS1Q86SY8 53 aa8.22□□□□□ -1.09
PCNX3-202ENST00000439247 RBM12B-AS1Q9P1G2 102 aa8.21□□□□□ -1.1
PCNX3-202ENST00000439247 IGHV6-1A0A0B4J1U7 121 aa8.2□□□□□ -1.1
PCNX3-202ENST00000439247 A0A087X002 238 aa8.2□□□□□ -1.1
PCNX3-202ENST00000439247 NUPR2A6NF83 97 aa8.2□□□□□ -1.1
PCNX3-202ENST00000439247 SPINK7P58062 85 aa8.2□□□□□ -1.1
PCNX3-202ENST00000439247 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
PCNX3-202ENST00000439247 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
PCNX3-202ENST00000439247 FRAS1Q86XX4 4008 aa8.19□□□□□ -1.1
PCNX3-202ENST00000439247 A6NN06 94 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms