RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
TCOF1-205ENST00000439160 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
TCOF1-205ENST00000439160 IGKV2D-30A0A075B6S6 120 aa7.91□□□□□ -1.14
TCOF1-205ENST00000439160 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
TCOF1-205ENST00000439160 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
TCOF1-205ENST00000439160 K7EQZ3 153 aa7.91□□□□□ -1.14
TCOF1-205ENST00000439160 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.15
TCOF1-205ENST00000439160 ZNF861PO60384 105 aa7.89□□□□□ -1.15
TCOF1-205ENST00000439160 TENM4Q6N022 2769 aa7.89□□□□□ -1.15
TCOF1-205ENST00000439160 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
TCOF1-205ENST00000439160 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
TCOF1-205ENST00000439160 SPINK1P00995 79 aa7.88□□□□□ -1.15
TCOF1-205ENST00000439160 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
TCOF1-205ENST00000439160 PRO0628Q9UI54 55 aa7.87□□□□□ -1.15
TCOF1-205ENST00000439160 PSORS1C2Q9UIG4 136 aa7.87□□□□□ -1.15
TCOF1-205ENST00000439160 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
TCOF1-205ENST00000439160 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
TCOF1-205ENST00000439160 Q8NDZ9 215 aa7.85□□□□□ -1.15
TCOF1-205ENST00000439160 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
TCOF1-205ENST00000439160 A8MWP4 228 aa7.84□□□□□ -1.15
TCOF1-205ENST00000439160 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
TCOF1-205ENST00000439160 LINC00313P59037 77 aa7.83□□□□□ -1.16
TCOF1-205ENST00000439160 TNP2Q05952 138 aa7.83□□□□□ -1.16
TCOF1-205ENST00000439160 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
TCOF1-205ENST00000439160 H7BZZ5 65 aa7.81□□□□□ -1.16
TCOF1-205ENST00000439160 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
TCOF1-205ENST00000439160 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
TCOF1-205ENST00000439160 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
TCOF1-205ENST00000439160 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
TCOF1-205ENST00000439160 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
TCOF1-205ENST00000439160 KRTAP1-5Q9BYS1 174 aa7.78□□□□□ -1.16
TCOF1-205ENST00000439160 MXRA5Q9NR99 2828 aa7.78□□□□□ -1.16
TCOF1-205ENST00000439160 PRR15Q8IV56 129 aa7.78□□□□□ -1.16
TCOF1-205ENST00000439160 OBSCN-AS1Q96MR7 158 aa7.77□□□□□ -1.16
TCOF1-205ENST00000439160 SSBP3-AS1Q7Z2R9 100 aa7.77□□□□□ -1.17
TCOF1-205ENST00000439160 Q96NJ1 140 aa7.77□□□□□ -1.17
TCOF1-205ENST00000439160 IGLV5-48A0A075B6I7 105 aa7.76□□□□□ -1.17
TCOF1-205ENST00000439160 LINC00336Q6ZUF6 198 aa7.76□□□□□ -1.17
TCOF1-205ENST00000439160 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
TCOF1-205ENST00000439160 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
TCOF1-205ENST00000439160 K7ERS5 55 aa7.75□□□□□ -1.17
TCOF1-205ENST00000439160 SPENQ96T58 3664 aaKnown RBP7.75□□□□□ -1.17
TCOF1-205ENST00000439160 C7orf65Q6ZTY9 151 aa7.73□□□□□ -1.17
TCOF1-205ENST00000439160 DSCR10P59022 87 aa7.73□□□□□ -1.17
TCOF1-205ENST00000439160 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
TCOF1-205ENST00000439160 H3BPC8 53 aa7.73□□□□□ -1.17
TCOF1-205ENST00000439160 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
TCOF1-205ENST00000439160 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.18
TCOF1-205ENST00000439160 A0A1B0GVX0 72 aa7.71□□□□□ -1.18
TCOF1-205ENST00000439160 SVEP1Q4LDE5 3571 aa7.7□□□□□ -1.18
TCOF1-205ENST00000439160 C8orf87E5RJ46 101 aa7.7□□□□□ -1.18
TCOF1-205ENST00000439160 SPAG11AQ6PDA7 123 aa7.69□□□□□ -1.18
TCOF1-205ENST00000439160 A8MUN3 132 aa7.68□□□□□ -1.18
TCOF1-205ENST00000439160 ACYP2P14621 99 aa7.68□□□□□ -1.18
TCOF1-205ENST00000439160 LOC101927531A0A1B0GV80 90 aa7.66□□□□□ -1.18
TCOF1-205ENST00000439160 SPRR1AP35321 89 aa7.66□□□□□ -1.18
TCOF1-205ENST00000439160 C9orf92A6NGG3 77 aa7.64□□□□□ -1.19
TCOF1-205ENST00000439160 CUBNO60494 3623 aa7.64□□□□□ -1.19
TCOF1-205ENST00000439160 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
TCOF1-205ENST00000439160 A0A1B0GU69 56 aa7.61□□□□□ -1.19
TCOF1-205ENST00000439160 CSMD2Q7Z408 3487 aa7.6□□□□□ -1.19
TCOF1-205ENST00000439160 PLAC8Q9NZF1 115 aa7.6□□□□□ -1.19
TCOF1-205ENST00000439160 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
TCOF1-205ENST00000439160 J3QL48 77 aa7.58□□□□□ -1.2
TCOF1-205ENST00000439160 COA5Q86WW8 74 aa7.56□□□□□ -1.2
TCOF1-205ENST00000439160 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
TCOF1-205ENST00000439160 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
TCOF1-205ENST00000439160 IGLV8-61A0A075B6I0 122 aa7.55□□□□□ -1.2
TCOF1-205ENST00000439160 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
TCOF1-205ENST00000439160 PANO1I0J062 215 aa7.54□□□□□ -1.2
TCOF1-205ENST00000439160 OXTP01178 125 aa7.53□□□□□ -1.2
TCOF1-205ENST00000439160 Q5XG85 94 aa7.53□□□□□ -1.2
TCOF1-205ENST00000439160 CELSR1Q9NYQ6 3014 aa7.53□□□□□ -1.2
TCOF1-205ENST00000439160 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
TCOF1-205ENST00000439160 FP248Q71RG6 208 aaPredicted RBP7.5□□□□□ -1.21
TCOF1-205ENST00000439160 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
TCOF1-205ENST00000439160 SPRR1BP22528 89 aa7.48□□□□□ -1.21
TCOF1-205ENST00000439160 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
TCOF1-205ENST00000439160 CD164Q04900 197 aa7.48□□□□□ -1.21
TCOF1-205ENST00000439160 TENM1Q9UKZ4 2725 aa7.48□□□□□ -1.21
TCOF1-205ENST00000439160 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
TCOF1-205ENST00000439160 FLG2Q5D862 2391 aaPredicted RBP7.46□□□□□ -1.22
TCOF1-205ENST00000439160 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.22
TCOF1-205ENST00000439160 Q6ZR54 194 aa7.46□□□□□ -1.22
TCOF1-205ENST00000439160 FBN1P35555 2871 aaKnown RBP7.43□□□□□ -1.22
TCOF1-205ENST00000439160 Q8N1X5 172 aa7.43□□□□□ -1.22
TCOF1-205ENST00000439160 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
TCOF1-205ENST00000439160 MMP24-AS1A0A0U1RRL7 71 aa7.42□□□□□ -1.22
TCOF1-205ENST00000439160 CYP4F30PQ9H0H9 118 aa7.42□□□□□ -1.22
TCOF1-205ENST00000439160 LCE6AA0A183 80 aa7.41□□□□□ -1.22
TCOF1-205ENST00000439160 BSNQ9UPA5 3926 aa7.41□□□□□ -1.22
TCOF1-205ENST00000439160 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
TCOF1-205ENST00000439160 OTOGQ6ZRI0 2925 aa7.41□□□□□ -1.22
TCOF1-205ENST00000439160 PDZD2O15018 2839 aa7.39□□□□□ -1.23
TCOF1-205ENST00000439160 SPANXA2-OT1Q8N9U9 137 aa7.39□□□□□ -1.23
TCOF1-205ENST00000439160 KRTAP11-1Q8IUC1 163 aa7.38□□□□□ -1.23
TCOF1-205ENST00000439160 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
TCOF1-205ENST00000439160 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
TCOF1-205ENST00000439160 VWFP04275 2813 aa7.36□□□□□ -1.23
TCOF1-205ENST00000439160 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms