RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 ERC2-IT1O76042 136 aa6.34□□□□□ -1.39
HLA-DMB-259ENST00000438510 TRACP01848 142 aa6.34□□□□□ -1.39
HLA-DMB-259ENST00000438510 A0A1B0GX51 115 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 OXTP01178 125 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 KRTAP1-4P0C5Y4 121 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 ANKRD29Q8N6D5 301 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 VPS25Q9BRG1 176 aa6.33□□□□□ -1.4
HLA-DMB-259ENST00000438510 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
HLA-DMB-259ENST00000438510 GAGE2AQ6NT46 116 aa6.31□□□□□ -1.4
HLA-DMB-259ENST00000438510 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
HLA-DMB-259ENST00000438510 KRTAP29-1A8MX34 341 aaPredicted RBP6.3□□□□□ -1.4
HLA-DMB-259ENST00000438510 C9JAW5 83 aa6.3□□□□□ -1.4
HLA-DMB-259ENST00000438510 CRYGAP11844 174 aa6.3□□□□□ -1.4
HLA-DMB-259ENST00000438510 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.3□□□□□ -1.4
HLA-DMB-259ENST00000438510 Q6ZQY7 126 aa6.3□□□□□ -1.4
HLA-DMB-259ENST00000438510 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
HLA-DMB-259ENST00000438510 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 TEX49A0A1B0GTD5 131 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 H3BQ85 93 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 DNAL4O96015 105 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 GHRHP01286 108 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 CLEC2BQ92478 149 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 FAM218AQ96MZ4 157 aa6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
HLA-DMB-259ENST00000438510 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
HLA-DMB-259ENST00000438510 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
HLA-DMB-259ENST00000438510 SPRR1BP22528 89 aa6.28□□□□□ -1.4
HLA-DMB-259ENST00000438510 DEFB105AQ8NG35 78 aa6.28□□□□□ -1.4
HLA-DMB-259ENST00000438510 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
HLA-DMB-259ENST00000438510 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
HLA-DMB-259ENST00000438510 A0A087X002 238 aa6.27□□□□□ -1.41
HLA-DMB-259ENST00000438510 PRR26Q8N8Z3 221 aa6.27□□□□□ -1.41
HLA-DMB-259ENST00000438510 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
HLA-DMB-259ENST00000438510 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
HLA-DMB-259ENST00000438510 ACYP1P07311 99 aa6.26□□□□□ -1.41
HLA-DMB-259ENST00000438510 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
HLA-DMB-259ENST00000438510 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
HLA-DMB-259ENST00000438510 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
HLA-DMB-259ENST00000438510 TYMSOSQ8TAI1 123 aa6.25□□□□□ -1.41
HLA-DMB-259ENST00000438510 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
HLA-DMB-259ENST00000438510 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
HLA-DMB-259ENST00000438510 KRTAP13-2Q52LG2 175 aa6.24□□□□□ -1.41
HLA-DMB-259ENST00000438510 Q8N377 158 aa6.24□□□□□ -1.41
HLA-DMB-259ENST00000438510 SIGMAR1Q99720 223 aa6.24□□□□□ -1.41
HLA-DMB-259ENST00000438510 ORMDL1Q9P0S3 153 aa6.24□□□□□ -1.41
HLA-DMB-259ENST00000438510 F8WEM9 126 aa6.23□□□□□ -1.41
HLA-DMB-259ENST00000438510 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
HLA-DMB-259ENST00000438510 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
HLA-DMB-259ENST00000438510 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
HLA-DMB-259ENST00000438510 Q8NBF4 154 aa6.23□□□□□ -1.41
HLA-DMB-259ENST00000438510 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
HLA-DMB-259ENST00000438510 MOBPQ13875 183 aa6.22□□□□□ -1.41
HLA-DMB-259ENST00000438510 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
HLA-DMB-259ENST00000438510 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
HLA-DMB-259ENST00000438510 HERC1Q15751 4861 aa6.21□□□□□ -1.42
HLA-DMB-259ENST00000438510 TMEM256-PLSCR3K7ERE1 68 aa6.2□□□□□ -1.42
HLA-DMB-259ENST00000438510 MTURNQ8N3F0 131 aa6.2□□□□□ -1.42
HLA-DMB-259ENST00000438510 BAALC-AS2P0C853 105 aa6.19□□□□□ -1.42
HLA-DMB-259ENST00000438510 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
HLA-DMB-259ENST00000438510 TNXBP22105 4242 aa6.19□□□□□ -1.42
HLA-DMB-259ENST00000438510 JMJD7-PLA2G4BH0Y9G9 81 aa6.18□□□□□ -1.42
HLA-DMB-259ENST00000438510 NDUFV3P56181 108 aaKnown RBP6.18□□□□□ -1.42
HLA-DMB-259ENST00000438510 PCP4P48539 62 aa6.17□□□□□ -1.42
HLA-DMB-259ENST00000438510 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
HLA-DMB-259ENST00000438510 OBSCN-AS1Q96MR7 158 aa6.17□□□□□ -1.42
HLA-DMB-259ENST00000438510 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
HLA-DMB-259ENST00000438510 IGLV8-61A0A075B6I0 122 aa6.16□□□□□ -1.42
HLA-DMB-259ENST00000438510 Q6JHZ5 121 aa6.16□□□□□ -1.42
HLA-DMB-259ENST00000438510 Q6Q795 121 aa6.16□□□□□ -1.42
HLA-DMB-259ENST00000438510 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
HLA-DMB-259ENST00000438510 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
HLA-DMB-259ENST00000438510 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
HLA-DMB-259ENST00000438510 PDE6GP18545 87 aa6.14□□□□□ -1.43
HLA-DMB-259ENST00000438510 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
HLA-DMB-259ENST00000438510 SPINK1P00995 79 aa6.13□□□□□ -1.43
HLA-DMB-259ENST00000438510 CD164Q04900 197 aa6.13□□□□□ -1.43
HLA-DMB-259ENST00000438510 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
HLA-DMB-259ENST00000438510 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
HLA-DMB-259ENST00000438510 RBM3P98179 157 aaKnown RBP6.1□□□□□ -1.43
HLA-DMB-259ENST00000438510 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
HLA-DMB-259ENST00000438510 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
HLA-DMB-259ENST00000438510 A0A1B0GV72 72 aa6.09□□□□□ -1.43
HLA-DMB-259ENST00000438510 HRCT1Q6UXD1 115 aa6.09□□□□□ -1.43
HLA-DMB-259ENST00000438510 DSCR8Q96T75 97 aa6.09□□□□□ -1.43
HLA-DMB-259ENST00000438510 TRBV7-7A0A0K0K1E9 115 aa6.08□□□□□ -1.44
HLA-DMB-259ENST00000438510 LOC110117498A0A087WWA1 95 aa6.07□□□□□ -1.44
HLA-DMB-259ENST00000438510 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
HLA-DMB-259ENST00000438510 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
HLA-DMB-259ENST00000438510 TRBV7-4A0A0J9YYF1 115 aa6.06□□□□□ -1.44
HLA-DMB-259ENST00000438510 A0A1B0GW54 56 aa6.05□□□□□ -1.44
HLA-DMB-259ENST00000438510 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
HLA-DMB-259ENST00000438510 CCKP06307 115 aa6.05□□□□□ -1.44
HLA-DMB-259ENST00000438510 Q5XG85 94 aa6.04□□□□□ -1.44
HLA-DMB-259ENST00000438510 SS18L2Q9UHA2 77 aa6.04□□□□□ -1.44
HLA-DMB-259ENST00000438510 A0A1W2PNM2 257 aa6.02□□□□□ -1.45
HLA-DMB-259ENST00000438510 C14orf132Q9NPU4 83 aa6.02□□□□□ -1.45
HLA-DMB-259ENST00000438510 Q6ZQT0 140 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms