RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
TTC3-209ENST00000438055 A0A0U1RQV1 116 aa10.53□□□□□ -0.72
TTC3-209ENST00000438055 LINC00474Q9P2X8 69 aa10.53□□□□□ -0.72
TTC3-209ENST00000438055 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.73
TTC3-209ENST00000438055 CNBPP62633 177 aaKnown RBP10.52□□□□□ -0.73
TTC3-209ENST00000438055 SRRM2Q9UQ35 2752 aaKnown RBP10.52□□□□□ -0.73
TTC3-209ENST00000438055 B9D2Q9BPU9 175 aa10.51□□□□□ -0.73
TTC3-209ENST00000438055 LRCOL1A6NCL2 159 aa10.51□□□□□ -0.73
TTC3-209ENST00000438055 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
TTC3-209ENST00000438055 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
TTC3-209ENST00000438055 H0Y9J4 135 aa10.48□□□□□ -0.73
TTC3-209ENST00000438055 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
TTC3-209ENST00000438055 MDFIQ99750 246 aa10.47□□□□□ -0.73
TTC3-209ENST00000438055 IGLV9-49A0A0B4J1Y8 123 aa10.47□□□□□ -0.73
TTC3-209ENST00000438055 MP68P56378 58 aa10.46□□□□□ -0.74
TTC3-209ENST00000438055 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
TTC3-209ENST00000438055 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
TTC3-209ENST00000438055 LINC00208Q96KT6 92 aa10.43□□□□□ -0.74
TTC3-209ENST00000438055 FP248Q71RG6 208 aaPredicted RBP10.42□□□□□ -0.74
TTC3-209ENST00000438055 HUWE1Q7Z6Z7 4374 aaKnown RBP10.41□□□□□ -0.74
TTC3-209ENST00000438055 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
TTC3-209ENST00000438055 PANO1I0J062 215 aa10.4□□□□□ -0.74
TTC3-209ENST00000438055 FAM229BQ4G0N7 80 aa10.4□□□□□ -0.74
TTC3-209ENST00000438055 NUPR2A6NF83 97 aa10.38□□□□□ -0.75
TTC3-209ENST00000438055 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
TTC3-209ENST00000438055 BRK1Q8WUW1 75 aa10.37□□□□□ -0.75
TTC3-209ENST00000438055 CMYA5Q8N3K9 4069 aa10.37□□□□□ -0.75
TTC3-209ENST00000438055 NDUFB1O75438 58 aa10.36□□□□□ -0.75
TTC3-209ENST00000438055 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
TTC3-209ENST00000438055 COL7A1Q02388 2944 aa10.35□□□□□ -0.75
TTC3-209ENST00000438055 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
TTC3-209ENST00000438055 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
TTC3-209ENST00000438055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
TTC3-209ENST00000438055 H0Y9P7 68 aa10.33□□□□□ -0.76
TTC3-209ENST00000438055 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
TTC3-209ENST00000438055 NDUFS5O43920 106 aa10.32□□□□□ -0.76
TTC3-209ENST00000438055 C1orf64Q8NEQ6 169 aa10.31□□□□□ -0.76
TTC3-209ENST00000438055 A8MWP4 228 aa10.3□□□□□ -0.76
TTC3-209ENST00000438055 ANAPC11Q9NYG5 84 aa10.3□□□□□ -0.76
TTC3-209ENST00000438055 CDK2AP2O75956 126 aa10.3□□□□□ -0.76
TTC3-209ENST00000438055 LYSTQ99698 3801 aa10.28□□□□□ -0.76
TTC3-209ENST00000438055 SPRR1BP22528 89 aa10.27□□□□□ -0.77
TTC3-209ENST00000438055 MOBPQ13875 183 aa10.26□□□□□ -0.77
TTC3-209ENST00000438055 A0A087WTM6 91 aa10.25□□□□□ -0.77
TTC3-209ENST00000438055 LINC00472Q9H8W2 130 aa10.25□□□□□ -0.77
TTC3-209ENST00000438055 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
TTC3-209ENST00000438055 RTL8CO15255 209 aa10.25□□□□□ -0.77
TTC3-209ENST00000438055 IGHV6-1A0A0B4J1U7 121 aa10.24□□□□□ -0.77
TTC3-209ENST00000438055 LCE6AA0A183 80 aa10.24□□□□□ -0.77
TTC3-209ENST00000438055 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
TTC3-209ENST00000438055 DNAH3Q8TD57 4116 aa10.24□□□□□ -0.77
TTC3-209ENST00000438055 PSPHP1O15172 72 aa10.24□□□□□ -0.77
TTC3-209ENST00000438055 SPINK6Q6UWN8 80 aa10.23□□□□□ -0.77
TTC3-209ENST00000438055 TRAV22A0A0B4J277 110 aa10.22□□□□□ -0.77
TTC3-209ENST00000438055 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
TTC3-209ENST00000438055 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
TTC3-209ENST00000438055 PRO0628Q9UI54 55 aa10.21□□□□□ -0.77
TTC3-209ENST00000438055 PCOTHQ58A44 107 aa10.21□□□□□ -0.77
TTC3-209ENST00000438055 PSORS1C2Q9UIG4 136 aa10.21□□□□□ -0.77
TTC3-209ENST00000438055 TGP01266 2768 aa10.2□□□□□ -0.78
TTC3-209ENST00000438055 KRTAP29-1A8MX34 341 aaPredicted RBP10.2□□□□□ -0.78
TTC3-209ENST00000438055 IGLV5-52A0A0A0MRZ9 124 aa10.19□□□□□ -0.78
TTC3-209ENST00000438055 ZNF706Q9Y5V0 76 aaPredicted RBP10.19□□□□□ -0.78
TTC3-209ENST00000438055 LY6G6CO95867 125 aa10.17□□□□□ -0.78
TTC3-209ENST00000438055 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
TTC3-209ENST00000438055 DNAH1Q9P2D7 4330 aa10.16□□□□□ -0.78
TTC3-209ENST00000438055 MMP24-AS1A0A0U1RRL7 71 aa10.15□□□□□ -0.79
TTC3-209ENST00000438055 KRTAP13-1Q8IUC0 172 aa10.14□□□□□ -0.79
TTC3-209ENST00000438055 CIRBP-AS1Q8TBR5 109 aa10.14□□□□□ -0.79
TTC3-209ENST00000438055 C1orf134Q5TEV5 83 aa10.12□□□□□ -0.79
TTC3-209ENST00000438055 ZNF861PO60384 105 aa10.11□□□□□ -0.79
TTC3-209ENST00000438055 C8orf17Q9NRJ1 99 aa10.11□□□□□ -0.79
TTC3-209ENST00000438055 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
TTC3-209ENST00000438055 H3BPC8 53 aa10.09□□□□□ -0.79
TTC3-209ENST00000438055 PLECQ15149 4684 aaKnown RBP10.09□□□□□ -0.79
TTC3-209ENST00000438055 WWC2-AS2Q96NR7 200 aa10.07□□□□□ -0.8
TTC3-209ENST00000438055 A8MUN3 132 aa10.06□□□□□ -0.8
TTC3-209ENST00000438055 A0A1B0GVX0 72 aa10.06□□□□□ -0.8
TTC3-209ENST00000438055 Q96NJ1 140 aa10.03□□□□□ -0.8
TTC3-209ENST00000438055 TP53AIP1Q9HCN2 124 aa10.03□□□□□ -0.8
TTC3-209ENST00000438055 DNAH7Q8WXX0 4024 aa10.02□□□□□ -0.81
TTC3-209ENST00000438055 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.81
TTC3-209ENST00000438055 Q1T7F1 81 aa10.02□□□□□ -0.81
TTC3-209ENST00000438055 LINC00483Q53H64 154 aa10.01□□□□□ -0.81
TTC3-209ENST00000438055 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
TTC3-209ENST00000438055 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
TTC3-209ENST00000438055 PRR15LQ9BU68 103 aa10.01□□□□□ -0.81
TTC3-209ENST00000438055 V9GYY9 64 aa10□□□□□ -0.81
TTC3-209ENST00000438055 A0A087X002 238 aa10□□□□□ -0.81
TTC3-209ENST00000438055 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
TTC3-209ENST00000438055 IGLV7-43P04211 117 aa9.99□□□□□ -0.81
TTC3-209ENST00000438055 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
TTC3-209ENST00000438055 COA5Q86WW8 74 aa9.99□□□□□ -0.81
TTC3-209ENST00000438055 Q6ZR54 194 aa9.98□□□□□ -0.81
TTC3-209ENST00000438055 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.81
TTC3-209ENST00000438055 MEGF8Q7Z7M0 2845 aa9.96□□□□□ -0.82
TTC3-209ENST00000438055 CD164Q04900 197 aa9.95□□□□□ -0.82
TTC3-209ENST00000438055 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
TTC3-209ENST00000438055 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
TTC3-209ENST00000438055 FBN3Q75N90 2809 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms