RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 CCL13Q99616 98 aa2.08□□□□□ -2.08
GTF3C3-204ENST00000435252 PHLDA3Q9Y5J5 127 aa2.08□□□□□ -2.08
GTF3C3-204ENST00000435252 R4GN34 69 aa2.08□□□□□ -2.08
GTF3C3-204ENST00000435252 HUWE1Q7Z6Z7 4374 aaKnown RBP2.08□□□□□ -2.08
GTF3C3-204ENST00000435252 PKHD1P08F94 4074 aa2.08□□□□□ -2.08
GTF3C3-204ENST00000435252 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 TRAV8-3A0A0A6YYJ7 113 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 IGHV6-1A0A0B4J1U7 121 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 IGHV1-69P01742 117 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 CCL3P10147 92 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 CLEC19AQ6UXS0 136 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 GPHB5Q86YW7 130 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 FAT4Q6V0I7 4981 aa2.07□□□□□ -2.08
GTF3C3-204ENST00000435252 TRAV22A0A0B4J277 110 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 JMJD7-PLA2G4BH0Y9G9 81 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 H0YGX0 51 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 BUB1B-PAK6H3BSN5 160 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 DNAL4O96015 105 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 CTSGP08311 255 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 FUSP35637 526 aaKnown RBP eCLIP2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 LINC00313P59037 77 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 LINC01554Q52M75 96 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 Q5VV11 94 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 PRNTQ86SH4 94 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 LINC00269Q8N2A0 174 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 LINC00337Q8N6G1 96 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 Q8N6K4 173 aa2.06□□□□□ -2.08
GTF3C3-204ENST00000435252 TRAV23DV6A0A075B6W5 121 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 TRBV6-8A0A0A6YYG3 113 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 IGHV1-18A0A0C4DH31 117 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 M0R1W7 72 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 M0R3E3 92 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 SAA1P0DJI8 122 aaPredicted RBP2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 POLR2KP53803 58 aaKnown RBP2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 MP68P56378 58 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 SPINK9Q5DT21 86 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 SOSTDC1Q6X4U4 206 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 TMEM254Q8TBM7 123 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 LIMD2Q9BT23 127 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 NDUFA4L2Q9NRX3 87 aa2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 MRPL36Q9P0J6 103 aaKnown RBP2.05□□□□□ -2.08
GTF3C3-204ENST00000435252 MYCBP2O75592 4640 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 TRBV6-5A0A0K0K1A5 114 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 LYNX1G3V0Z9 82 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 H0YGG7 62 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 H7C2G1 150 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 PSCAO43653 123 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 CGB3P0DN86 165 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 CGB7P0DN87 165 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 LYNX1P0DP58 116 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 ELOF1P60002 83 aaKnown RBP2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 ERHP84090 104 aaKnown RBP2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 FLG2Q5D862 2391 aaPredicted RBP2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 SPANXN1Q5VSR9 72 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 DNAH11Q96DT5 4516 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 ZNF625Q96I27 306 aaPredicted RBP2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
GTF3C3-204ENST00000435252 IGLV3-9A0A075B6K5 115 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 LOC110117498A0A087WWA1 95 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 TRAV10A0A0B4J240 114 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 H3BRN7 92 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 TRGV3P03979 118 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 IGHV3-30-3P0DP02 117 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 PDE6GP18545 87 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 TMEM167AQ8TBQ9 72 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 UBL5Q9BZL1 73 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 CDC42SE2Q9NRR3 84 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 NDUFA12Q9UI09 145 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
GTF3C3-204ENST00000435252 A0A1B0GW54 56 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 HCG22E2RYF7 251 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 H3BQ85 93 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 NDUFA1O15239 70 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 NREPQ16612 68 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 DEFB114Q30KQ6 69 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 DEFB112Q30KQ8 113 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 ENHOQ6UWT2 76 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 LINC00308Q8TCZ7 52 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 C14orf132Q9NPU4 83 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 LENEPQ9Y5L5 61 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 FAT2Q9NYQ8 4349 aa2.02□□□□□ -2.09
GTF3C3-204ENST00000435252 PRM2P04554 102 aa2.01□□□□□ -2.09
GTF3C3-204ENST00000435252 S100A4P26447 101 aaKnown RBP2.01□□□□□ -2.09
GTF3C3-204ENST00000435252 C9orf116Q5BN46 136 aaPredicted RBP2.01□□□□□ -2.09
GTF3C3-204ENST00000435252 WFDC9Q8NEX5 89 aa2.01□□□□□ -2.09
GTF3C3-204ENST00000435252 Q9BRP9 147 aa2.01□□□□□ -2.09
GTF3C3-204ENST00000435252 PLAC8Q9NZF1 115 aa2.01□□□□□ -2.09
GTF3C3-204ENST00000435252 APOBP04114 4563 aaKnown RBP2□□□□□ -2.09
GTF3C3-204ENST00000435252 IGKV1-16P04430 117 aa2□□□□□ -2.09
GTF3C3-204ENST00000435252 WT1-ASQ06250 92 aa2□□□□□ -2.09
GTF3C3-204ENST00000435252 NNATQ16517 81 aa2□□□□□ -2.09
GTF3C3-204ENST00000435252 ORMDL1Q9P0S3 153 aa2□□□□□ -2.09
GTF3C3-204ENST00000435252 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 SAA2P0DJI9 122 aaPredicted RBP1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 RPL27AP46776 148 aaKnown RBP1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 CNBPP62633 177 aaKnown RBP1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms