RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 C1orf137Q5JT78 98 aa11.67□□□□□ -0.54
FAM3A-212ENST00000434658 A0A1W2PNM2 257 aa11.67□□□□□ -0.54
FAM3A-212ENST00000434658 Q8NBF4 154 aa11.65□□□□□ -0.54
FAM3A-212ENST00000434658 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.55
FAM3A-212ENST00000434658 TMEM258P61165 79 aa11.65□□□□□ -0.55
FAM3A-212ENST00000434658 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
FAM3A-212ENST00000434658 PKD1P98161 4303 aa11.64□□□□□ -0.55
FAM3A-212ENST00000434658 IGKV4-1P06312 121 aa11.63□□□□□ -0.55
FAM3A-212ENST00000434658 SMIM29Q86T20 159 aa11.63□□□□□ -0.55
FAM3A-212ENST00000434658 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
FAM3A-212ENST00000434658 BPY2O14599 106 aa11.63□□□□□ -0.55
FAM3A-212ENST00000434658 A0A087WTM6 91 aa11.62□□□□□ -0.55
FAM3A-212ENST00000434658 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
FAM3A-212ENST00000434658 BIRC6Q9NR09 4857 aa11.62□□□□□ -0.55
FAM3A-212ENST00000434658 PKIGQ9Y2B9 76 aa11.61□□□□□ -0.55
FAM3A-212ENST00000434658 C9orf163Q8N9P6 203 aa11.6□□□□□ -0.55
FAM3A-212ENST00000434658 DNAH11Q96DT5 4516 aa11.6□□□□□ -0.55
FAM3A-212ENST00000434658 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
FAM3A-212ENST00000434658 PRLHP81277 87 aa11.59□□□□□ -0.55
FAM3A-212ENST00000434658 Q8N9L7 120 aa11.59□□□□□ -0.55
FAM3A-212ENST00000434658 F8WEM9 126 aa11.58□□□□□ -0.56
FAM3A-212ENST00000434658 CHTF8P0CG12 524 aa11.58□□□□□ -0.56
FAM3A-212ENST00000434658 KRTAP10-2P60368 255 aa11.57□□□□□ -0.56
FAM3A-212ENST00000434658 PHF5AQ7RTV0 110 aaKnown RBP11.56□□□□□ -0.56
FAM3A-212ENST00000434658 H0Y9J4 135 aa11.56□□□□□ -0.56
FAM3A-212ENST00000434658 IGLV8-61A0A075B6I0 122 aa11.54□□□□□ -0.56
FAM3A-212ENST00000434658 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
FAM3A-212ENST00000434658 HIGD2AQ9BW72 106 aa11.54□□□□□ -0.56
FAM3A-212ENST00000434658 KLKP1Q107X0 134 aa11.53□□□□□ -0.56
FAM3A-212ENST00000434658 LINC00474Q9P2X8 69 aa11.53□□□□□ -0.56
FAM3A-212ENST00000434658 J3KT08 172 aa11.53□□□□□ -0.56
FAM3A-212ENST00000434658 PKHD1P08F94 4074 aa11.53□□□□□ -0.56
FAM3A-212ENST00000434658 RPS28P62857 69 aaKnown RBP11.52□□□□□ -0.57
FAM3A-212ENST00000434658 IGFL1Q6UW32 110 aa11.51□□□□□ -0.57
FAM3A-212ENST00000434658 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
FAM3A-212ENST00000434658 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
FAM3A-212ENST00000434658 DPH3Q96FX2 82 aa11.49□□□□□ -0.57
FAM3A-212ENST00000434658 SPRR1BP22528 89 aa11.49□□□□□ -0.57
FAM3A-212ENST00000434658 H7BZZ5 65 aa11.47□□□□□ -0.57
FAM3A-212ENST00000434658 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
FAM3A-212ENST00000434658 IGLV5-52A0A0A0MRZ9 124 aa11.46□□□□□ -0.57
FAM3A-212ENST00000434658 UBE2AP49459 152 aa11.46□□□□□ -0.57
FAM3A-212ENST00000434658 OCR1Q9BZK8 76 aa11.46□□□□□ -0.57
FAM3A-212ENST00000434658 DSCR10P59022 87 aa11.46□□□□□ -0.58
FAM3A-212ENST00000434658 PANO1I0J062 215 aa11.45□□□□□ -0.58
FAM3A-212ENST00000434658 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
FAM3A-212ENST00000434658 SNURFQ9Y675 71 aa11.44□□□□□ -0.58
FAM3A-212ENST00000434658 SPACA4Q8TDM5 124 aa11.42□□□□□ -0.58
FAM3A-212ENST00000434658 LRP1BQ9NZR2 4599 aa11.41□□□□□ -0.58
FAM3A-212ENST00000434658 FAM236DA0A1B0GTK5 79 aa11.41□□□□□ -0.58
FAM3A-212ENST00000434658 NDUFC1O43677 76 aa11.41□□□□□ -0.58
FAM3A-212ENST00000434658 FAM236CP0DP71 79 aa11.41□□□□□ -0.58
FAM3A-212ENST00000434658 KRTAP13-1Q8IUC0 172 aa11.41□□□□□ -0.58
FAM3A-212ENST00000434658 TMEM254Q8TBM7 123 aa11.4□□□□□ -0.58
FAM3A-212ENST00000434658 K7EQZ3 153 aa11.39□□□□□ -0.59
FAM3A-212ENST00000434658 KRTAP10-1P60331 282 aa11.39□□□□□ -0.59
FAM3A-212ENST00000434658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.38□□□□□ -0.59
FAM3A-212ENST00000434658 KIAA1109Q2LD37 5005 aa11.38□□□□□ -0.59
FAM3A-212ENST00000434658 A0A087WSZ3 146 aa11.37□□□□□ -0.59
FAM3A-212ENST00000434658 A0A0U1RQV1 116 aa11.35□□□□□ -0.59
FAM3A-212ENST00000434658 CDK2AP2O75956 126 aa11.34□□□□□ -0.59
FAM3A-212ENST00000434658 OXTP01178 125 aa11.34□□□□□ -0.59
FAM3A-212ENST00000434658 RYR1P21817 5038 aa11.33□□□□□ -0.6
FAM3A-212ENST00000434658 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
FAM3A-212ENST00000434658 FAM30AQ9NZY2 134 aa11.31□□□□□ -0.6
FAM3A-212ENST00000434658 SRRM2Q9UQ35 2752 aaKnown RBP11.3□□□□□ -0.6
FAM3A-212ENST00000434658 APOBP04114 4563 aaKnown RBP11.29□□□□□ -0.6
FAM3A-212ENST00000434658 SERP1Q9Y6X1 66 aa11.29□□□□□ -0.6
FAM3A-212ENST00000434658 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
FAM3A-212ENST00000434658 DEFB116Q30KQ4 102 aa11.28□□□□□ -0.6
FAM3A-212ENST00000434658 HERC2O95714 4834 aa11.28□□□□□ -0.6
FAM3A-212ENST00000434658 DNAH8Q96JB1 4490 aa11.26□□□□□ -0.61
FAM3A-212ENST00000434658 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
FAM3A-212ENST00000434658 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
FAM3A-212ENST00000434658 Q6ZSA8 131 aa11.24□□□□□ -0.61
FAM3A-212ENST00000434658 LINC00472Q9H8W2 130 aa11.24□□□□□ -0.61
FAM3A-212ENST00000434658 HSPG2P98160 4391 aa11.23□□□□□ -0.61
FAM3A-212ENST00000434658 RPL37AP61513 92 aaKnown RBP11.21□□□□□ -0.61
FAM3A-212ENST00000434658 ZNF706Q9Y5V0 76 aaPredicted RBP11.21□□□□□ -0.61
FAM3A-212ENST00000434658 PSORS1C2Q9UIG4 136 aa11.21□□□□□ -0.62
FAM3A-212ENST00000434658 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
FAM3A-212ENST00000434658 A8MWP4 228 aa11.19□□□□□ -0.62
FAM3A-212ENST00000434658 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
FAM3A-212ENST00000434658 C5orf47Q569G3 176 aa11.19□□□□□ -0.62
FAM3A-212ENST00000434658 WFDC13Q8IUB5 93 aa11.19□□□□□ -0.62
FAM3A-212ENST00000434658 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
FAM3A-212ENST00000434658 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
FAM3A-212ENST00000434658 ZCCHC13Q8WW36 166 aaKnown RBP11.18□□□□□ -0.62
FAM3A-212ENST00000434658 IGLV9-49A0A0B4J1Y8 123 aa11.16□□□□□ -0.62
FAM3A-212ENST00000434658 SMR3BP02814 79 aaPredicted RBP11.16□□□□□ -0.62
FAM3A-212ENST00000434658 Q8N1X5 172 aa11.16□□□□□ -0.62
FAM3A-212ENST00000434658 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
FAM3A-212ENST00000434658 ZNF861PO60384 105 aa11.14□□□□□ -0.63
FAM3A-212ENST00000434658 Q5XG85 94 aa11.14□□□□□ -0.63
FAM3A-212ENST00000434658 CASC2Q6XLA1 102 aa11.13□□□□□ -0.63
FAM3A-212ENST00000434658 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
FAM3A-212ENST00000434658 Q96NJ1 140 aa11.09□□□□□ -0.63
FAM3A-212ENST00000434658 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
FAM3A-212ENST00000434658 Q5VSD8 79 aa11.07□□□□□ -0.64
FAM3A-212ENST00000434658 SMIM26A0A096LP01 95 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms