RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 OCR1Q9BZK8 76 aa9.91□□□□□ -0.82
SCARF1-203ENST00000434376 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
SCARF1-203ENST00000434376 PANO1I0J062 215 aa9.9□□□□□ -0.83
SCARF1-203ENST00000434376 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.83
SCARF1-203ENST00000434376 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
SCARF1-203ENST00000434376 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
SCARF1-203ENST00000434376 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
SCARF1-203ENST00000434376 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
SCARF1-203ENST00000434376 WFDC13Q8IUB5 93 aa9.88□□□□□ -0.83
SCARF1-203ENST00000434376 UBE2AP49459 152 aa9.87□□□□□ -0.83
SCARF1-203ENST00000434376 LY6G6CO95867 125 aa9.84□□□□□ -0.83
SCARF1-203ENST00000434376 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
SCARF1-203ENST00000434376 K7EQZ3 153 aa9.84□□□□□ -0.83
SCARF1-203ENST00000434376 ANAPC11Q9NYG5 84 aa9.84□□□□□ -0.83
SCARF1-203ENST00000434376 DHRS4-AS1Q9P1J3 65 aa9.83□□□□□ -0.84
SCARF1-203ENST00000434376 DNAH3Q8TD57 4116 aa9.83□□□□□ -0.84
SCARF1-203ENST00000434376 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
SCARF1-203ENST00000434376 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
SCARF1-203ENST00000434376 A0A087WSZ3 146 aa9.82□□□□□ -0.84
SCARF1-203ENST00000434376 IGLV9-49A0A0B4J1Y8 123 aa9.82□□□□□ -0.84
SCARF1-203ENST00000434376 RPL37AP61513 92 aaKnown RBP9.81□□□□□ -0.84
SCARF1-203ENST00000434376 C1orf64Q8NEQ6 169 aa9.81□□□□□ -0.84
SCARF1-203ENST00000434376 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
SCARF1-203ENST00000434376 C16orf90A8MZG2 172 aa9.79□□□□□ -0.84
SCARF1-203ENST00000434376 V9GYY9 64 aa9.79□□□□□ -0.84
SCARF1-203ENST00000434376 TLX1NBP0CAT3 122 aa9.78□□□□□ -0.84
SCARF1-203ENST00000434376 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
SCARF1-203ENST00000434376 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
SCARF1-203ENST00000434376 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
SCARF1-203ENST00000434376 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
SCARF1-203ENST00000434376 Q8NBF4 154 aa9.75□□□□□ -0.85
SCARF1-203ENST00000434376 LINC00208Q96KT6 92 aa9.74□□□□□ -0.85
SCARF1-203ENST00000434376 DSCR10P59022 87 aa9.74□□□□□ -0.85
SCARF1-203ENST00000434376 hDV103S1A0JD37 113 aa9.73□□□□□ -0.85
SCARF1-203ENST00000434376 IGLV5-48A0A075B6I7 105 aa9.72□□□□□ -0.85
SCARF1-203ENST00000434376 NUPR2A6NF83 97 aa9.72□□□□□ -0.85
SCARF1-203ENST00000434376 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
SCARF1-203ENST00000434376 HCG22E2RYF7 251 aa9.71□□□□□ -0.85
SCARF1-203ENST00000434376 A8MUN3 132 aa9.7□□□□□ -0.86
SCARF1-203ENST00000434376 SPRR1AP35321 89 aa9.69□□□□□ -0.86
SCARF1-203ENST00000434376 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
SCARF1-203ENST00000434376 F8WDY8 70 aa9.69□□□□□ -0.86
SCARF1-203ENST00000434376 MP68P56378 58 aa9.69□□□□□ -0.86
SCARF1-203ENST00000434376 C14orf177Q52M58 125 aa9.68□□□□□ -0.86
SCARF1-203ENST00000434376 DNAH1Q9P2D7 4330 aa9.67□□□□□ -0.86
SCARF1-203ENST00000434376 TRAV22A0A0B4J277 110 aa9.67□□□□□ -0.86
SCARF1-203ENST00000434376 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
SCARF1-203ENST00000434376 H0Y9J4 135 aa9.66□□□□□ -0.86
SCARF1-203ENST00000434376 SEC61GP60059 68 aa9.66□□□□□ -0.86
SCARF1-203ENST00000434376 CNBPP62633 177 aaKnown RBP9.66□□□□□ -0.86
SCARF1-203ENST00000434376 A8MU10 97 aa9.65□□□□□ -0.86
SCARF1-203ENST00000434376 SPTSSBQ8NFR3 76 aa9.65□□□□□ -0.86
SCARF1-203ENST00000434376 RTL8CO15255 209 aa9.64□□□□□ -0.87
SCARF1-203ENST00000434376 A0A087WTM6 91 aa9.64□□□□□ -0.87
SCARF1-203ENST00000434376 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
SCARF1-203ENST00000434376 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
SCARF1-203ENST00000434376 IGLV5-52A0A0A0MRZ9 124 aa9.62□□□□□ -0.87
SCARF1-203ENST00000434376 CHKB-CPT1BH3BT56 60 aa9.61□□□□□ -0.87
SCARF1-203ENST00000434376 TNP2Q05952 138 aa9.59□□□□□ -0.87
SCARF1-203ENST00000434376 H0Y9P7 68 aa9.59□□□□□ -0.87
SCARF1-203ENST00000434376 PMAIP1Q13794 54 aa9.59□□□□□ -0.87
SCARF1-203ENST00000434376 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
SCARF1-203ENST00000434376 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
SCARF1-203ENST00000434376 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
SCARF1-203ENST00000434376 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
SCARF1-203ENST00000434376 C1orf134Q5TEV5 83 aa9.57□□□□□ -0.88
SCARF1-203ENST00000434376 CASC2Q6XLA1 102 aa9.57□□□□□ -0.88
SCARF1-203ENST00000434376 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
SCARF1-203ENST00000434376 MOBPQ13875 183 aa9.57□□□□□ -0.88
SCARF1-203ENST00000434376 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
SCARF1-203ENST00000434376 Q1T7F1 81 aa9.55□□□□□ -0.88
SCARF1-203ENST00000434376 ZCCHC13Q8WW36 166 aaKnown RBP9.55□□□□□ -0.88
SCARF1-203ENST00000434376 NDUFB1O75438 58 aa9.55□□□□□ -0.88
SCARF1-203ENST00000434376 NDUFS5O43920 106 aa9.53□□□□□ -0.88
SCARF1-203ENST00000434376 CIRBP-AS1Q8TBR5 109 aa9.52□□□□□ -0.89
SCARF1-203ENST00000434376 PRR15Q8IV56 129 aa9.5□□□□□ -0.89
SCARF1-203ENST00000434376 A0A1B0GW54 56 aa9.5□□□□□ -0.89
SCARF1-203ENST00000434376 A6NED7 52 aa9.5□□□□□ -0.89
SCARF1-203ENST00000434376 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
SCARF1-203ENST00000434376 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
SCARF1-203ENST00000434376 LCE6AA0A183 80 aa9.49□□□□□ -0.89
SCARF1-203ENST00000434376 SPACA4Q8TDM5 124 aa9.49□□□□□ -0.89
SCARF1-203ENST00000434376 DNAH2Q9P225 4427 aa9.48□□□□□ -0.89
SCARF1-203ENST00000434376 DNAH11Q96DT5 4516 aa9.48□□□□□ -0.89
SCARF1-203ENST00000434376 IGHV6-1A0A0B4J1U7 121 aa9.48□□□□□ -0.89
SCARF1-203ENST00000434376 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
SCARF1-203ENST00000434376 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
SCARF1-203ENST00000434376 Q5VV11 94 aa9.45□□□□□ -0.9
SCARF1-203ENST00000434376 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
SCARF1-203ENST00000434376 SPAG11AQ6PDA7 123 aa9.43□□□□□ -0.9
SCARF1-203ENST00000434376 Q8N9P0 234 aaPredicted RBP9.4□□□□□ -0.9
SCARF1-203ENST00000434376 COA5Q86WW8 74 aa9.39□□□□□ -0.91
SCARF1-203ENST00000434376 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
SCARF1-203ENST00000434376 Q6ZR54 194 aa9.38□□□□□ -0.91
SCARF1-203ENST00000434376 A8MWP4 228 aa9.38□□□□□ -0.91
SCARF1-203ENST00000434376 LIMD2Q9BT23 127 aa9.36□□□□□ -0.91
SCARF1-203ENST00000434376 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
SCARF1-203ENST00000434376 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
SCARF1-203ENST00000434376 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
SCARF1-203ENST00000434376 ZNF861PO60384 105 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms