RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 F8W1H4 67 aa15.86■□□□□ 0.13
TMEM248-205ENST00000433271 ANKRD29Q8N6D5 301 aa15.86■□□□□ 0.13
TMEM248-205ENST00000433271 SMCPP49901 116 aaPredicted RBP15.84■□□□□ 0.13
TMEM248-205ENST00000433271 LINC01600Q96MT4 127 aa15.83■□□□□ 0.13
TMEM248-205ENST00000433271 SMIM29Q86T20 159 aa15.83■□□□□ 0.12
TMEM248-205ENST00000433271 ANAPC11Q9NYG5 84 aa15.82■□□□□ 0.12
TMEM248-205ENST00000433271 KRTAP1-4P0C5Y4 121 aa15.81■□□□□ 0.12
TMEM248-205ENST00000433271 C3orf22Q8N5N4 141 aa15.81■□□□□ 0.12
TMEM248-205ENST00000433271 NDUFV3P56181 108 aaKnown RBP15.79■□□□□ 0.12
TMEM248-205ENST00000433271 LAMTOR3Q9UHA4 124 aa15.79■□□□□ 0.12
TMEM248-205ENST00000433271 FAM229BQ4G0N7 80 aa15.76■□□□□ 0.11
TMEM248-205ENST00000433271 F8WEM9 126 aa15.72■□□□□ 0.11
TMEM248-205ENST00000433271 PKHD1L1Q86WI1 4243 aa15.71■□□□□ 0.11
TMEM248-205ENST00000433271 CRYGAP11844 174 aa15.7■□□□□ 0.1
TMEM248-205ENST00000433271 A0A087X002 238 aa15.69■□□□□ 0.1
TMEM248-205ENST00000433271 IGLV9-49A0A0B4J1Y8 123 aa15.68■□□□□ 0.1
TMEM248-205ENST00000433271 JMJD7-PLA2G4BH0Y9G9 81 aa15.68■□□□□ 0.1
TMEM248-205ENST00000433271 OBSCN-AS1Q96MR7 158 aa15.68■□□□□ 0.1
TMEM248-205ENST00000433271 KRTAP4-5Q9BYR2 181 aa15.68■□□□□ 0.1
TMEM248-205ENST00000433271 A0A1B0GV72 72 aa15.67■□□□□ 0.1
TMEM248-205ENST00000433271 IGLV8-61A0A075B6I0 122 aa15.66■□□□□ 0.1
TMEM248-205ENST00000433271 RBM3P98179 157 aaKnown RBP15.66■□□□□ 0.1
TMEM248-205ENST00000433271 ETDBQ3ZM63 59 aa15.66■□□□□ 0.1
TMEM248-205ENST00000433271 TEN1Q86WV5 123 aa15.66■□□□□ 0.1
TMEM248-205ENST00000433271 C9orf153Q5TBE3 101 aa15.64■□□□□ 0.09
TMEM248-205ENST00000433271 HERC2O95714 4834 aa15.64■□□□□ 0.09
TMEM248-205ENST00000433271 MOBPQ13875 183 aa15.63■□□□□ 0.09
TMEM248-205ENST00000433271 KRTAP13-2Q52LG2 175 aa15.63■□□□□ 0.09
TMEM248-205ENST00000433271 Q8NBF4 154 aa15.61■□□□□ 0.09
TMEM248-205ENST00000433271 PRR26Q8N8Z3 221 aa15.61■□□□□ 0.09
TMEM248-205ENST00000433271 Q6JHZ5 121 aa15.59■□□□□ 0.09
TMEM248-205ENST00000433271 DSCR8Q96T75 97 aa15.59■□□□□ 0.09
TMEM248-205ENST00000433271 TRBV7-4A0A0J9YYF1 115 aa15.57■□□□□ 0.08
TMEM248-205ENST00000433271 SSBP3-AS1Q7Z2R9 100 aa15.57■□□□□ 0.08
TMEM248-205ENST00000433271 C14orf132Q9NPU4 83 aa15.57■□□□□ 0.08
TMEM248-205ENST00000433271 FLG2Q5D862 2391 aaPredicted RBP15.57■□□□□ 0.08
TMEM248-205ENST00000433271 IGFL1Q6UW32 110 aa15.55■□□□□ 0.08
TMEM248-205ENST00000433271 TYMSOSQ8TAI1 123 aa15.55■□□□□ 0.08
TMEM248-205ENST00000433271 LOC110117498A0A087WWA1 95 aa15.54■□□□□ 0.08
TMEM248-205ENST00000433271 PDE6GP18545 87 aa15.53■□□□□ 0.08
TMEM248-205ENST00000433271 A0A0G2JQZ4 141 aa15.51■□□□□ 0.07
TMEM248-205ENST00000433271 Q6ZQT0 140 aa15.49■□□□□ 0.07
TMEM248-205ENST00000433271 CCKP06307 115 aa15.45■□□□□ 0.06
TMEM248-205ENST00000433271 KRTAP10-8P60410 259 aa15.45■□□□□ 0.06
TMEM248-205ENST00000433271 LRP1Q07954 4544 aaKnown RBP15.45■□□□□ 0.06
TMEM248-205ENST00000433271 A0A1W2PNM2 257 aa15.43■□□□□ 0.06
TMEM248-205ENST00000433271 OXTP01178 125 aa15.43■□□□□ 0.06
TMEM248-205ENST00000433271 C21orf62-AS1Q17RA5 79 aa15.43■□□□□ 0.06
TMEM248-205ENST00000433271 VPS25Q9BRG1 176 aa15.41■□□□□ 0.06
TMEM248-205ENST00000433271 MYCBP2O75592 4640 aa15.4■□□□□ 0.06
TMEM248-205ENST00000433271 Q6Q795 121 aa15.4■□□□□ 0.06
TMEM248-205ENST00000433271 CD164Q04900 197 aa15.39■□□□□ 0.05
TMEM248-205ENST00000433271 FAT3Q8TDW7 4589 aa15.39■□□□□ 0.05
TMEM248-205ENST00000433271 ABCA13Q86UQ4 5058 aa15.37■□□□□ 0.05
TMEM248-205ENST00000433271 HRCT1Q6UXD1 115 aa15.37■□□□□ 0.05
TMEM248-205ENST00000433271 LINC00304Q8N9R0 145 aa15.36■□□□□ 0.05
TMEM248-205ENST00000433271 C4orf48Q5BLP8 95 aa15.35■□□□□ 0.05
TMEM248-205ENST00000433271 KRTAP29-1A8MX34 341 aaPredicted RBP15.35■□□□□ 0.05
TMEM248-205ENST00000433271 MT1HL1P0DM35 61 aa15.34■□□□□ 0.05
TMEM248-205ENST00000433271 SPAG11AQ6PDA7 123 aa15.34■□□□□ 0.05
TMEM248-205ENST00000433271 TRBV7-7A0A0K0K1E9 115 aa15.32■□□□□ 0.04
TMEM248-205ENST00000433271 A0A1B0GW54 56 aa15.32■□□□□ 0.04
TMEM248-205ENST00000433271 SPINK1P00995 79 aa15.3■□□□□ 0.04
TMEM248-205ENST00000433271 TNXBP22105 4242 aa15.28■□□□□ 0.04
TMEM248-205ENST00000433271 A0A087WSZ3 146 aa15.27■□□□□ 0.03
TMEM248-205ENST00000433271 J3QR89 54 aa15.27■□□□□ 0.03
TMEM248-205ENST00000433271 RPS29P62273 56 aaKnown RBP15.23■□□□□ 0.03
TMEM248-205ENST00000433271 FAM240AA0A1B0GVK7 77 aa15.22■□□□□ 0.03
TMEM248-205ENST00000433271 ACYP1P07311 99 aa15.21■□□□□ 0.03
TMEM248-205ENST00000433271 Q5XG85 94 aa15.21■□□□□ 0.02
TMEM248-205ENST00000433271 LIMD2Q9BT23 127 aa15.19■□□□□ 0.02
TMEM248-205ENST00000433271 SS18L2Q9UHA2 77 aa15.19■□□□□ 0.02
TMEM248-205ENST00000433271 DMBT1Q9UGM3 2413 aaPredicted RBP15.19■□□□□ 0.02
TMEM248-205ENST00000433271 LINC00846Q9NV44 126 aa15.17■□□□□ 0.02
TMEM248-205ENST00000433271 K7ERU9 68 aa15.17■□□□□ 0.02
TMEM248-205ENST00000433271 J3QL48 77 aa15.15■□□□□ 0.02
TMEM248-205ENST00000433271 ASB16-AS1Q495Z4 193 aa15.13■□□□□ 0.01
TMEM248-205ENST00000433271 NREPQ16612 68 aa15.11■□□□□ 0.01
TMEM248-205ENST00000433271 UBL5Q9BZL1 73 aa15.1■□□□□ 0.01
TMEM248-205ENST00000433271 PCLOQ9Y6V0 5065 aa15.08■□□□□ 0
TMEM248-205ENST00000433271 Q6ZVQ6 151 aa15.07■□□□□ 0
TMEM248-205ENST00000433271 LINC00472Q9H8W2 130 aa15.05■□□□□ -0
TMEM248-205ENST00000433271 Q96NJ1 140 aa15.03■□□□□ -0
TMEM248-205ENST00000433271 C1orf195Q5TG92 126 aa15.02□□□□□ -0.01
TMEM248-205ENST00000433271 DEFB116Q30KQ4 102 aa14.97□□□□□ -0.01
TMEM248-205ENST00000433271 CDIP1Q9H305 208 aa14.95□□□□□ -0.02
TMEM248-205ENST00000433271 J3KT08 172 aa14.93□□□□□ -0.02
TMEM248-205ENST00000433271 RETNLBQ9BQ08 111 aa14.93□□□□□ -0.02
TMEM248-205ENST00000433271 BPY2O14599 106 aa14.92□□□□□ -0.02
TMEM248-205ENST00000433271 IGKV4-1P06312 121 aa14.92□□□□□ -0.02
TMEM248-205ENST00000433271 SIGMAR1Q99720 223 aa14.92□□□□□ -0.02
TMEM248-205ENST00000433271 LINC00643Q86TS7 51 aa14.91□□□□□ -0.02
TMEM248-205ENST00000433271 CXCL6P80162 114 aa14.85□□□□□ -0.03
TMEM248-205ENST00000433271 DSCR10P59022 87 aa14.84□□□□□ -0.03
TMEM248-205ENST00000433271 ATP5EP2Q5VTU8 51 aa14.84□□□□□ -0.03
TMEM248-205ENST00000433271 FP248Q71RG6 208 aaPredicted RBP14.83□□□□□ -0.04
TMEM248-205ENST00000433271 A8MWP4 228 aa14.81□□□□□ -0.04
TMEM248-205ENST00000433271 IGKV3D-7A0A0C4DH55 119 aa14.8□□□□□ -0.04
TMEM248-205ENST00000433271 NDUFB1O75438 58 aa14.78□□□□□ -0.04
TMEM248-205ENST00000433271 A0A1B0GVX0 72 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms