RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 WIPF1O43516 503 aa8.12□□□□□ -1.11
LRRTM1-206ENST00000433224 TRBV7-4A0A0J9YYF1 115 aa8.11□□□□□ -1.11
LRRTM1-206ENST00000433224 Q8NBF4 154 aa8.11□□□□□ -1.11
LRRTM1-206ENST00000433224 WWC2-AS2Q96NR7 200 aa8.11□□□□□ -1.11
LRRTM1-206ENST00000433224 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
LRRTM1-206ENST00000433224 MOBPQ13875 183 aa8.1□□□□□ -1.11
LRRTM1-206ENST00000433224 IGHV6-1A0A0B4J1U7 121 aa8.1□□□□□ -1.11
LRRTM1-206ENST00000433224 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
LRRTM1-206ENST00000433224 ZNF706Q9Y5V0 76 aaPredicted RBP8.1□□□□□ -1.11
LRRTM1-206ENST00000433224 H0Y9P7 68 aa8.1□□□□□ -1.11
LRRTM1-206ENST00000433224 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
LRRTM1-206ENST00000433224 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
LRRTM1-206ENST00000433224 LINC00476Q8WZB0 136 aa8.08□□□□□ -1.12
LRRTM1-206ENST00000433224 RPL37AP61513 92 aaKnown RBP8.08□□□□□ -1.12
LRRTM1-206ENST00000433224 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
LRRTM1-206ENST00000433224 K7EQZ3 153 aa8.08□□□□□ -1.12
LRRTM1-206ENST00000433224 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
LRRTM1-206ENST00000433224 Q8N377 158 aa8.07□□□□□ -1.12
LRRTM1-206ENST00000433224 IGLV1-50A0A075B6I6 118 aa8.06□□□□□ -1.12
LRRTM1-206ENST00000433224 A0A087WTM6 91 aa8.04□□□□□ -1.12
LRRTM1-206ENST00000433224 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
LRRTM1-206ENST00000433224 KCNQ1DNQ9H478 68 aa8.03□□□□□ -1.12
LRRTM1-206ENST00000433224 TENM2Q9NT68 2774 aa8.03□□□□□ -1.12
LRRTM1-206ENST00000433224 OXTP01178 125 aa8.03□□□□□ -1.12
LRRTM1-206ENST00000433224 C9orf163Q8N9P6 203 aa8.02□□□□□ -1.12
LRRTM1-206ENST00000433224 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.12
LRRTM1-206ENST00000433224 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
LRRTM1-206ENST00000433224 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
LRRTM1-206ENST00000433224 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
LRRTM1-206ENST00000433224 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
LRRTM1-206ENST00000433224 TGP01266 2768 aa8□□□□□ -1.13
LRRTM1-206ENST00000433224 A0A1W2PNM2 257 aa8□□□□□ -1.13
LRRTM1-206ENST00000433224 TNP2Q05952 138 aa7.98□□□□□ -1.13
LRRTM1-206ENST00000433224 Q5XG85 94 aa7.97□□□□□ -1.13
LRRTM1-206ENST00000433224 hDV103S1A0JD37 113 aa7.97□□□□□ -1.13
LRRTM1-206ENST00000433224 A8MUN3 132 aa7.97□□□□□ -1.13
LRRTM1-206ENST00000433224 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
LRRTM1-206ENST00000433224 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
LRRTM1-206ENST00000433224 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
LRRTM1-206ENST00000433224 A0A1B0GW54 56 aa7.93□□□□□ -1.14
LRRTM1-206ENST00000433224 OCR1Q9BZK8 76 aa7.93□□□□□ -1.14
LRRTM1-206ENST00000433224 PSORS1C2Q9UIG4 136 aa7.93□□□□□ -1.14
LRRTM1-206ENST00000433224 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
LRRTM1-206ENST00000433224 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
LRRTM1-206ENST00000433224 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
LRRTM1-206ENST00000433224 FAM229BQ4G0N7 80 aa7.89□□□□□ -1.15
LRRTM1-206ENST00000433224 KRTAP26-1Q6PEX3 210 aa7.89□□□□□ -1.15
LRRTM1-206ENST00000433224 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
LRRTM1-206ENST00000433224 CNBPP62633 177 aaKnown RBP7.89□□□□□ -1.15
LRRTM1-206ENST00000433224 SEC61GP60059 68 aa7.88□□□□□ -1.15
LRRTM1-206ENST00000433224 IGLV5-48A0A075B6I7 105 aa7.88□□□□□ -1.15
LRRTM1-206ENST00000433224 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
LRRTM1-206ENST00000433224 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
LRRTM1-206ENST00000433224 FLG2Q5D862 2391 aaPredicted RBP7.87□□□□□ -1.15
LRRTM1-206ENST00000433224 DSCR10P59022 87 aa7.85□□□□□ -1.15
LRRTM1-206ENST00000433224 ZNF861PO60384 105 aa7.84□□□□□ -1.15
LRRTM1-206ENST00000433224 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
LRRTM1-206ENST00000433224 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
LRRTM1-206ENST00000433224 A8MWP4 228 aa7.83□□□□□ -1.16
LRRTM1-206ENST00000433224 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
LRRTM1-206ENST00000433224 IGKV2D-30A0A075B6S6 120 aa7.82□□□□□ -1.16
LRRTM1-206ENST00000433224 IGKV2-30P06310 120 aa7.82□□□□□ -1.16
LRRTM1-206ENST00000433224 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
LRRTM1-206ENST00000433224 PANO1I0J062 215 aa7.81□□□□□ -1.16
LRRTM1-206ENST00000433224 COA5Q86WW8 74 aa7.8□□□□□ -1.16
LRRTM1-206ENST00000433224 SPINK1P00995 79 aa7.8□□□□□ -1.16
LRRTM1-206ENST00000433224 H3BPC8 53 aa7.77□□□□□ -1.17
LRRTM1-206ENST00000433224 IGLV7-43P04211 117 aa7.77□□□□□ -1.17
LRRTM1-206ENST00000433224 ZNF469Q96JG9 3925 aaPredicted RBP7.76□□□□□ -1.17
LRRTM1-206ENST00000433224 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
LRRTM1-206ENST00000433224 TP53AIP1Q9HCN2 124 aa7.76□□□□□ -1.17
LRRTM1-206ENST00000433224 FAM229AH3BQW9 127 aa7.75□□□□□ -1.17
LRRTM1-206ENST00000433224 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
LRRTM1-206ENST00000433224 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
LRRTM1-206ENST00000433224 C8orf17Q9NRJ1 99 aa7.7□□□□□ -1.18
LRRTM1-206ENST00000433224 LINC00313P59037 77 aa7.7□□□□□ -1.18
LRRTM1-206ENST00000433224 Q96NJ1 140 aa7.69□□□□□ -1.18
LRRTM1-206ENST00000433224 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
LRRTM1-206ENST00000433224 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
LRRTM1-206ENST00000433224 SPRR1AP35321 89 aa7.68□□□□□ -1.18
LRRTM1-206ENST00000433224 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
LRRTM1-206ENST00000433224 LOC101927531A0A1B0GV80 90 aa7.66□□□□□ -1.18
LRRTM1-206ENST00000433224 Q1T7F1 81 aa7.66□□□□□ -1.18
LRRTM1-206ENST00000433224 A0A1B0GU69 56 aa7.66□□□□□ -1.18
LRRTM1-206ENST00000433224 KRTAP11-1Q8IUC1 163 aa7.66□□□□□ -1.18
LRRTM1-206ENST00000433224 ACYP2P14621 99 aa7.65□□□□□ -1.18
LRRTM1-206ENST00000433224 KRTAP10-1P60331 282 aa7.64□□□□□ -1.19
LRRTM1-206ENST00000433224 PRR26Q8N8Z3 221 aa7.64□□□□□ -1.19
LRRTM1-206ENST00000433224 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
LRRTM1-206ENST00000433224 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
LRRTM1-206ENST00000433224 CYP4F30PQ9H0H9 118 aa7.63□□□□□ -1.19
LRRTM1-206ENST00000433224 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
LRRTM1-206ENST00000433224 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
LRRTM1-206ENST00000433224 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
LRRTM1-206ENST00000433224 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
LRRTM1-206ENST00000433224 PLAC8Q9NZF1 115 aa7.6□□□□□ -1.19
LRRTM1-206ENST00000433224 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
LRRTM1-206ENST00000433224 ATP11AUNQ6ZP68 121 aa7.58□□□□□ -1.2
LRRTM1-206ENST00000433224 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
LRRTM1-206ENST00000433224 KRTAP4-16G5E9R7 235 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms