RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 KANTRA0A1W2PQU2 76 aa-0.82□□□□□ -2.54
CDC40-204ENST00000431461 K7EP34 96 aa-0.82□□□□□ -2.54
CDC40-204ENST00000431461 IFI6P09912 130 aa-0.82□□□□□ -2.54
CDC40-204ENST00000431461 S100A16Q96FQ6 103 aaKnown RBP-0.82□□□□□ -2.54
CDC40-204ENST00000431461 UBR1Q8IWV7 1749 aa-0.82□□□□□ -2.54
CDC40-204ENST00000431461 FASNP49327 2511 aaKnown RBP-0.83□□□□□ -2.54
CDC40-204ENST00000431461 UMAD1C9J7I0 102 aa-0.83□□□□□ -2.54
CDC40-204ENST00000431461 LYSTQ99698 3801 aa-0.83□□□□□ -2.54
CDC40-204ENST00000431461 CUBNO60494 3623 aa-0.83□□□□□ -2.54
CDC40-204ENST00000431461 MAP3K4Q9Y6R4 1608 aa-0.83□□□□□ -2.54
CDC40-204ENST00000431461 MYO18BQ8IUG5 2567 aa-0.83□□□□□ -2.54
CDC40-204ENST00000431461 STARD9Q9P2P6 4700 aa-0.84□□□□□ -2.54
CDC40-204ENST00000431461 UBR4Q5T4S7 5183 aa-0.84□□□□□ -2.54
CDC40-204ENST00000431461 ZZEF1O43149 2961 aa-0.84□□□□□ -2.54
CDC40-204ENST00000431461 ATP5EP2Q5VTU8 51 aa-0.84□□□□□ -2.54
CDC40-204ENST00000431461 DIP2BQ9P265 1576 aa-0.84□□□□□ -2.54
CDC40-204ENST00000431461 ACACAQ13085 2346 aa-0.84□□□□□ -2.54
CDC40-204ENST00000431461 NCOA2Q15596 1464 aa-0.85□□□□□ -2.55
CDC40-204ENST00000431461 MRPL33O75394 65 aaKnown RBP-0.85□□□□□ -2.55
CDC40-204ENST00000431461 DOT1LQ8TEK3 1739 aa-0.85□□□□□ -2.55
CDC40-204ENST00000431461 S4R3F8 94 aa-0.85□□□□□ -2.55
CDC40-204ENST00000431461 USH2AO75445 5202 aa-0.85□□□□□ -2.55
CDC40-204ENST00000431461 AKAP9Q99996 3911 aa-0.86□□□□□ -2.55
CDC40-204ENST00000431461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.86□□□□□ -2.55
CDC40-204ENST00000431461 DMXL1Q9Y485 3027 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 PPLO60437 1756 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 ARFGEF2Q9Y6D5 1785 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 H0YAA0 97 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 TMEM131LA2VDJ0 1609 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 KIF14Q15058 1648 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 USP9YO00507 2555 aaPredicted RBP-0.87□□□□□ -2.55
CDC40-204ENST00000431461 PKHD1L1Q86WI1 4243 aa-0.87□□□□□ -2.55
CDC40-204ENST00000431461 DDX60LQ5H9U9 1706 aaKnown RBP-0.87□□□□□ -2.55
CDC40-204ENST00000431461 DEFB131BA0A096LNP1 70 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 NDUFA4O00483 81 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 IAPPP10997 89 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 MT1HP80294 61 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 FAM186AA6NE01 2351 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 TTC37Q6PGP7 1564 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 MUC17Q685J3 4493 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 MGAM2Q2M2H8 2515 aa-0.88□□□□□ -2.55
CDC40-204ENST00000431461 UACAQ9BZF9 1416 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 DNAH9Q9NYC9 4486 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 DEFB130BP0DP73 79 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 DEFB130AP0DP74 79 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 DEFA5Q01523 94 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 DNAH3Q8TD57 4116 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 SCN11AQ9UI33 1791 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 PIK3C2BO00750 1634 aa-0.89□□□□□ -2.55
CDC40-204ENST00000431461 DEFB110Q30KQ9 67 aa-0.9□□□□□ -2.55
CDC40-204ENST00000431461 LRRK2Q5S007 2527 aa-0.91□□□□□ -2.56
CDC40-204ENST00000431461 GCN1Q92616 2671 aaKnown RBP-0.92□□□□□ -2.56
CDC40-204ENST00000431461 NBEAQ8NFP9 2946 aa-0.92□□□□□ -2.56
CDC40-204ENST00000431461 NREPQ16612 68 aa-0.92□□□□□ -2.56
CDC40-204ENST00000431461 DEFB106AQ8N104 65 aa-0.92□□□□□ -2.56
CDC40-204ENST00000431461 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.92□□□□□ -2.56
CDC40-204ENST00000431461 ANK3Q12955 4377 aaKnown RBP-0.92□□□□□ -2.56
CDC40-204ENST00000431461 VPS13DQ5THJ4 4388 aa-0.92□□□□□ -2.56
CDC40-204ENST00000431461 ITSN1Q15811 1721 aa-0.92□□□□□ -2.56
CDC40-204ENST00000431461 DSPP15924 2871 aaKnown RBP-0.93□□□□□ -2.56
CDC40-204ENST00000431461 A0A087WXM4 84 aa-0.93□□□□□ -2.56
CDC40-204ENST00000431461 HFM1A2PYH4 1435 aa-0.93□□□□□ -2.56
CDC40-204ENST00000431461 DEFB121Q5J5C9 76 aa-0.94□□□□□ -2.56
CDC40-204ENST00000431461 VPS13BQ7Z7G8 4022 aa-0.94□□□□□ -2.56
CDC40-204ENST00000431461 UTP20O75691 2785 aaKnown RBP-0.94□□□□□ -2.56
CDC40-204ENST00000431461 PKD1L2Q7Z442 2459 aa-0.94□□□□□ -2.56
CDC40-204ENST00000431461 KIAA0586Q9BVV6 1533 aa-0.94□□□□□ -2.56
CDC40-204ENST00000431461 NBEAL2Q6ZNJ1 2754 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 DEFB1P60022 68 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 BVES-AS1Q5T3Y7 98 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 UBL5Q9BZL1 73 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 PLCH1Q4KWH8 1693 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 ZNF831Q5JPB2 1677 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 CFAP43Q8NDM7 1665 aa-0.95□□□□□ -2.56
CDC40-204ENST00000431461 EPPK1P58107 5090 aaKnown RBP-0.96□□□□□ -2.56
CDC40-204ENST00000431461 ACACBO00763 2458 aa-0.96□□□□□ -2.56
CDC40-204ENST00000431461 CEP290O15078 2479 aa-0.96□□□□□ -2.56
CDC40-204ENST00000431461 ZC3H13Q5T200 1668 aaKnown RBP-0.96□□□□□ -2.56
CDC40-204ENST00000431461 RALGAPBQ86X10 1494 aa-0.96□□□□□ -2.56
CDC40-204ENST00000431461 ADIRFQ15847 76 aa-0.96□□□□□ -2.56
CDC40-204ENST00000431461 KCNQ1DNQ9H478 68 aa-0.96□□□□□ -2.56
CDC40-204ENST00000431461 ST20Q9HBF5 79 aa-0.96□□□□□ -2.56
CDC40-204ENST00000431461 ABCC1P33527 1531 aa-0.97□□□□□ -2.56
CDC40-204ENST00000431461 KDM5DQ9BY66 1539 aa-0.97□□□□□ -2.56
CDC40-204ENST00000431461 S100A13Q99584 98 aa-0.97□□□□□ -2.56
CDC40-204ENST00000431461 KALRNO60229 2985 aa-0.98□□□□□ -2.57
CDC40-204ENST00000431461 MMP24-AS1A0A0U1RRL7 71 aa-0.98□□□□□ -2.57
CDC40-204ENST00000431461 WT1-ASQ06250 92 aa-0.98□□□□□ -2.57
CDC40-204ENST00000431461 CCDC168Q8NDH2 2452 aa-0.99□□□□□ -2.57
CDC40-204ENST00000431461 H3BUA1 57 aa-0.99□□□□□ -2.57
CDC40-204ENST00000431461 SMIM13P0DJ93 91 aa-0.99□□□□□ -2.57
CDC40-204ENST00000431461 ARHGAP35Q9NRY4 1499 aa-0.99□□□□□ -2.57
CDC40-204ENST00000431461 DOPEY1Q5JWR5 2465 aa-0.99□□□□□ -2.57
CDC40-204ENST00000431461 INO80Q9ULG1 1556 aaPredicted RBP-1□□□□□ -2.57
CDC40-204ENST00000431461 TNP1P09430 55 aa-1□□□□□ -2.57
CDC40-204ENST00000431461 CLPSL2Q6UWE3 100 aa-1□□□□□ -2.57
CDC40-204ENST00000431461 ANKRD36CQ5JPF3 1778 aa-1.01□□□□□ -2.57
CDC40-204ENST00000431461 DNAH11Q96DT5 4516 aa-1.01□□□□□ -2.57
CDC40-204ENST00000431461 KRTAP19-5Q3LI72 72 aa-1.01□□□□□ -2.57
CDC40-204ENST00000431461 TDRG1Q3Y452 100 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms