RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KMT2AQ03164 3969 aa8.68□□□□□ -1.02
HOXC4-202ENST00000430889 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
HOXC4-202ENST00000430889 NREPQ16612 68 aa8.68□□□□□ -1.02
HOXC4-202ENST00000430889 A0A087WTM6 91 aa8.67□□□□□ -1.02
HOXC4-202ENST00000430889 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
HOXC4-202ENST00000430889 SPRR1BP22528 89 aa8.67□□□□□ -1.02
HOXC4-202ENST00000430889 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
HOXC4-202ENST00000430889 SVIPQ8NHG7 77 aa8.66□□□□□ -1.02
HOXC4-202ENST00000430889 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
HOXC4-202ENST00000430889 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
HOXC4-202ENST00000430889 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
HOXC4-202ENST00000430889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.03
HOXC4-202ENST00000430889 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
HOXC4-202ENST00000430889 IGFL1Q6UW32 110 aa8.64□□□□□ -1.03
HOXC4-202ENST00000430889 HIGD2AQ9BW72 106 aa8.64□□□□□ -1.03
HOXC4-202ENST00000430889 TRAV7A0A075B6U4 112 aa8.63□□□□□ -1.03
HOXC4-202ENST00000430889 BPY2O14599 106 aa8.62□□□□□ -1.03
HOXC4-202ENST00000430889 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
HOXC4-202ENST00000430889 F8WEM9 126 aa8.61□□□□□ -1.03
HOXC4-202ENST00000430889 Q8N9L7 120 aa8.61□□□□□ -1.03
HOXC4-202ENST00000430889 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
HOXC4-202ENST00000430889 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
HOXC4-202ENST00000430889 RTL8CO15255 209 aa8.58□□□□□ -1.04
HOXC4-202ENST00000430889 UBE2AP49459 152 aa8.57□□□□□ -1.04
HOXC4-202ENST00000430889 DSCR10P59022 87 aa8.56□□□□□ -1.04
HOXC4-202ENST00000430889 FRAS1Q86XX4 4008 aa8.56□□□□□ -1.04
HOXC4-202ENST00000430889 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
HOXC4-202ENST00000430889 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
HOXC4-202ENST00000430889 PLAC8Q9NZF1 115 aa8.54□□□□□ -1.04
HOXC4-202ENST00000430889 TMEM258P61165 79 aa8.53□□□□□ -1.04
HOXC4-202ENST00000430889 DNAH11Q96DT5 4516 aa8.53□□□□□ -1.04
HOXC4-202ENST00000430889 C1orf134Q5TEV5 83 aa8.53□□□□□ -1.04
HOXC4-202ENST00000430889 C20orf197Q8N268 126 aa8.53□□□□□ -1.04
HOXC4-202ENST00000430889 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
HOXC4-202ENST00000430889 KLKP1Q107X0 134 aa8.52□□□□□ -1.05
HOXC4-202ENST00000430889 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
HOXC4-202ENST00000430889 TGP01266 2768 aa8.51□□□□□ -1.05
HOXC4-202ENST00000430889 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
HOXC4-202ENST00000430889 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
HOXC4-202ENST00000430889 A0A087WSZ3 146 aa8.49□□□□□ -1.05
HOXC4-202ENST00000430889 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
HOXC4-202ENST00000430889 K7EQZ3 153 aa8.49□□□□□ -1.05
HOXC4-202ENST00000430889 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
HOXC4-202ENST00000430889 H7BZZ5 65 aa8.47□□□□□ -1.05
HOXC4-202ENST00000430889 LY6G6CO95867 125 aa8.46□□□□□ -1.06
HOXC4-202ENST00000430889 LCE6AA0A183 80 aa8.44□□□□□ -1.06
HOXC4-202ENST00000430889 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
HOXC4-202ENST00000430889 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
HOXC4-202ENST00000430889 HYDINQ4G0P3 5121 aa8.43□□□□□ -1.06
HOXC4-202ENST00000430889 SNURFQ9Y675 71 aa8.43□□□□□ -1.06
HOXC4-202ENST00000430889 ZNF861PO60384 105 aa8.42□□□□□ -1.06
HOXC4-202ENST00000430889 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
HOXC4-202ENST00000430889 TMEM254Q8TBM7 123 aa8.42□□□□□ -1.06
HOXC4-202ENST00000430889 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
HOXC4-202ENST00000430889 PKD1P98161 4303 aa8.41□□□□□ -1.06
HOXC4-202ENST00000430889 A0A0U1RQV1 116 aa8.41□□□□□ -1.06
HOXC4-202ENST00000430889 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
HOXC4-202ENST00000430889 DEFB116Q30KQ4 102 aa8.41□□□□□ -1.06
HOXC4-202ENST00000430889 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
HOXC4-202ENST00000430889 J3KT08 172 aa8.39□□□□□ -1.07
HOXC4-202ENST00000430889 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
HOXC4-202ENST00000430889 FAT2Q9NYQ8 4349 aa8.39□□□□□ -1.07
HOXC4-202ENST00000430889 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
HOXC4-202ENST00000430889 NDUFC1O43677 76 aa8.38□□□□□ -1.07
HOXC4-202ENST00000430889 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
HOXC4-202ENST00000430889 FAM30AQ9NZY2 134 aa8.37□□□□□ -1.07
HOXC4-202ENST00000430889 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
HOXC4-202ENST00000430889 FAM236DA0A1B0GTK5 79 aa8.37□□□□□ -1.07
HOXC4-202ENST00000430889 FAM236CP0DP71 79 aa8.37□□□□□ -1.07
HOXC4-202ENST00000430889 PRR15Q8IV56 129 aa8.37□□□□□ -1.07
HOXC4-202ENST00000430889 Q96NJ1 140 aa8.37□□□□□ -1.07
HOXC4-202ENST00000430889 A8MWP4 228 aa8.36□□□□□ -1.07
HOXC4-202ENST00000430889 OXTP01178 125 aa8.36□□□□□ -1.07
HOXC4-202ENST00000430889 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
HOXC4-202ENST00000430889 Q6ZSA8 131 aa8.35□□□□□ -1.07
HOXC4-202ENST00000430889 MOBPQ13875 183 aa8.33□□□□□ -1.08
HOXC4-202ENST00000430889 CIRBP-AS1Q8TBR5 109 aa8.33□□□□□ -1.08
HOXC4-202ENST00000430889 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
HOXC4-202ENST00000430889 ANAPC11Q9NYG5 84 aa8.32□□□□□ -1.08
HOXC4-202ENST00000430889 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
HOXC4-202ENST00000430889 KRTAP10-1P60331 282 aa8.29□□□□□ -1.08
HOXC4-202ENST00000430889 MMP24-AS1A0A0U1RRL7 71 aa8.28□□□□□ -1.08
HOXC4-202ENST00000430889 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
HOXC4-202ENST00000430889 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
HOXC4-202ENST00000430889 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.08
HOXC4-202ENST00000430889 CASC2Q6XLA1 102 aa8.27□□□□□ -1.08
HOXC4-202ENST00000430889 LRP1BQ9NZR2 4599 aa8.27□□□□□ -1.09
HOXC4-202ENST00000430889 SERP1Q9Y6X1 66 aa8.27□□□□□ -1.09
HOXC4-202ENST00000430889 SACSQ9NZJ4 4579 aa8.26□□□□□ -1.09
HOXC4-202ENST00000430889 HRCT1Q6UXD1 115 aa8.25□□□□□ -1.09
HOXC4-202ENST00000430889 NDUFB1O75438 58 aa8.21□□□□□ -1.09
HOXC4-202ENST00000430889 CD164Q04900 197 aa8.21□□□□□ -1.09
HOXC4-202ENST00000430889 SSBP3-AS1Q7Z2R9 100 aa8.2□□□□□ -1.1
HOXC4-202ENST00000430889 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
HOXC4-202ENST00000430889 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
HOXC4-202ENST00000430889 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
HOXC4-202ENST00000430889 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
HOXC4-202ENST00000430889 H3BPC8 53 aa8.17□□□□□ -1.1
HOXC4-202ENST00000430889 Q5XG85 94 aa8.17□□□□□ -1.1
HOXC4-202ENST00000430889 MP68P56378 58 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms