RNA–Protein interactions for RNA: ENST00000428939.3

HOTAIRM1-202, Transcript of HOXA transcript antisense RNA, myeloid-specific 1, humanhuman

TSL 2 BASIC

Gene HOTAIRM1, Length 889 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIRM1-202ENST00000428939 LINC01547P58512 204 aaPredicted RBP7.38□□□□□ -1.23
HOTAIRM1-202ENST00000428939 Q8N377 158 aa7.38□□□□□ -1.23
HOTAIRM1-202ENST00000428939 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
HOTAIRM1-202ENST00000428939 RPL37AP61513 92 aaKnown RBP7.37□□□□□ -1.23
HOTAIRM1-202ENST00000428939 ZNF706Q9Y5V0 76 aaPredicted RBP7.37□□□□□ -1.23
HOTAIRM1-202ENST00000428939 PKHD1P08F94 4074 aa7.36□□□□□ -1.23
HOTAIRM1-202ENST00000428939 K7ERU9 68 aa7.36□□□□□ -1.23
HOTAIRM1-202ENST00000428939 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
HOTAIRM1-202ENST00000428939 A0A1B0GV72 72 aa7.35□□□□□ -1.23
HOTAIRM1-202ENST00000428939 GAGE2AQ6NT46 116 aa7.35□□□□□ -1.23
HOTAIRM1-202ENST00000428939 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
HOTAIRM1-202ENST00000428939 F8WEM9 126 aa7.33□□□□□ -1.24
HOTAIRM1-202ENST00000428939 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
HOTAIRM1-202ENST00000428939 SPRR1BP22528 89 aa7.33□□□□□ -1.24
HOTAIRM1-202ENST00000428939 RBM3P98179 157 aaKnown RBP7.33□□□□□ -1.24
HOTAIRM1-202ENST00000428939 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
HOTAIRM1-202ENST00000428939 CDK2AP2O75956 126 aa7.32□□□□□ -1.24
HOTAIRM1-202ENST00000428939 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
HOTAIRM1-202ENST00000428939 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
HOTAIRM1-202ENST00000428939 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
HOTAIRM1-202ENST00000428939 DSCR8Q96T75 97 aa7.31□□□□□ -1.24
HOTAIRM1-202ENST00000428939 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
HOTAIRM1-202ENST00000428939 SMIM29Q86T20 159 aa7.3□□□□□ -1.24
HOTAIRM1-202ENST00000428939 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.25
HOTAIRM1-202ENST00000428939 PDE6GP18545 87 aa7.27□□□□□ -1.25
HOTAIRM1-202ENST00000428939 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
HOTAIRM1-202ENST00000428939 SPINK6Q6UWN8 80 aa7.27□□□□□ -1.25
HOTAIRM1-202ENST00000428939 TRBV7-4A0A0J9YYF1 115 aa7.26□□□□□ -1.25
HOTAIRM1-202ENST00000428939 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
HOTAIRM1-202ENST00000428939 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
HOTAIRM1-202ENST00000428939 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
HOTAIRM1-202ENST00000428939 CCKP06307 115 aa7.25□□□□□ -1.25
HOTAIRM1-202ENST00000428939 Q6ZQT0 140 aa7.25□□□□□ -1.25
HOTAIRM1-202ENST00000428939 IGLV8-61A0A075B6I0 122 aa7.24□□□□□ -1.25
HOTAIRM1-202ENST00000428939 IGLV9-49A0A0B4J1Y8 123 aa7.24□□□□□ -1.25
HOTAIRM1-202ENST00000428939 C9orf153Q5TBE3 101 aa7.24□□□□□ -1.25
HOTAIRM1-202ENST00000428939 ANAPC11Q9NYG5 84 aa7.24□□□□□ -1.25
HOTAIRM1-202ENST00000428939 RYR1P21817 5038 aa7.23□□□□□ -1.25
HOTAIRM1-202ENST00000428939 Q6JHZ5 121 aa7.23□□□□□ -1.25
HOTAIRM1-202ENST00000428939 VPS25Q9BRG1 176 aa7.23□□□□□ -1.25
HOTAIRM1-202ENST00000428939 FAM240AA0A1B0GVK7 77 aa7.22□□□□□ -1.25
HOTAIRM1-202ENST00000428939 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
HOTAIRM1-202ENST00000428939 ACYP1P07311 99 aa7.21□□□□□ -1.26
HOTAIRM1-202ENST00000428939 MOBPQ13875 183 aa7.21□□□□□ -1.26
HOTAIRM1-202ENST00000428939 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
HOTAIRM1-202ENST00000428939 Q5VSD8 79 aa7.21□□□□□ -1.26
HOTAIRM1-202ENST00000428939 IGFL1Q6UW32 110 aa7.21□□□□□ -1.26
HOTAIRM1-202ENST00000428939 Q8NBF4 154 aa7.21□□□□□ -1.26
HOTAIRM1-202ENST00000428939 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
HOTAIRM1-202ENST00000428939 EPPK1P58107 5090 aaKnown RBP7.19□□□□□ -1.26
HOTAIRM1-202ENST00000428939 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
HOTAIRM1-202ENST00000428939 CRYGAP11844 174 aa7.18□□□□□ -1.26
HOTAIRM1-202ENST00000428939 A0A1W2PNM2 257 aa7.17□□□□□ -1.26
HOTAIRM1-202ENST00000428939 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
HOTAIRM1-202ENST00000428939 HSPG2P98160 4391 aa7.16□□□□□ -1.26
HOTAIRM1-202ENST00000428939 FAT1Q14517 4588 aa7.16□□□□□ -1.26
HOTAIRM1-202ENST00000428939 A0A087X002 238 aa7.15□□□□□ -1.26
HOTAIRM1-202ENST00000428939 A0A1B0GW54 56 aa7.15□□□□□ -1.26
HOTAIRM1-202ENST00000428939 SSBP3-AS1Q7Z2R9 100 aa7.15□□□□□ -1.26
HOTAIRM1-202ENST00000428939 Q8N1X5 172 aa7.15□□□□□ -1.26
HOTAIRM1-202ENST00000428939 LINC00846Q9NV44 126 aa7.15□□□□□ -1.26
HOTAIRM1-202ENST00000428939 Q6Q795 121 aa7.13□□□□□ -1.27
HOTAIRM1-202ENST00000428939 UBL5Q9BZL1 73 aa7.13□□□□□ -1.27
HOTAIRM1-202ENST00000428939 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
HOTAIRM1-202ENST00000428939 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
HOTAIRM1-202ENST00000428939 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
HOTAIRM1-202ENST00000428939 TYMSOSQ8TAI1 123 aa7.11□□□□□ -1.27
HOTAIRM1-202ENST00000428939 A0A087WSZ3 146 aa7.1□□□□□ -1.27
HOTAIRM1-202ENST00000428939 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
HOTAIRM1-202ENST00000428939 TRBV7-7A0A0K0K1E9 115 aa7.1□□□□□ -1.27
HOTAIRM1-202ENST00000428939 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
HOTAIRM1-202ENST00000428939 BIRC6Q9NR09 4857 aa7.09□□□□□ -1.27
HOTAIRM1-202ENST00000428939 PRR26Q8N8Z3 221 aa7.09□□□□□ -1.27
HOTAIRM1-202ENST00000428939 H3BS24 57 aa7.08□□□□□ -1.28
HOTAIRM1-202ENST00000428939 CD164Q04900 197 aa7.08□□□□□ -1.28
HOTAIRM1-202ENST00000428939 NREPQ16612 68 aa7.08□□□□□ -1.28
HOTAIRM1-202ENST00000428939 Q6ZVQ6 151 aa7.08□□□□□ -1.28
HOTAIRM1-202ENST00000428939 LINC00643Q86TS7 51 aa7.08□□□□□ -1.28
HOTAIRM1-202ENST00000428939 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
HOTAIRM1-202ENST00000428939 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
HOTAIRM1-202ENST00000428939 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
HOTAIRM1-202ENST00000428939 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
HOTAIRM1-202ENST00000428939 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
HOTAIRM1-202ENST00000428939 ATP5EP2Q5VTU8 51 aa7.04□□□□□ -1.28
HOTAIRM1-202ENST00000428939 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
HOTAIRM1-202ENST00000428939 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.29
HOTAIRM1-202ENST00000428939 IGKV3D-7A0A0C4DH55 119 aa7.01□□□□□ -1.29
HOTAIRM1-202ENST00000428939 BPY2O14599 106 aa7.01□□□□□ -1.29
HOTAIRM1-202ENST00000428939 MT-ATP8P03928 68 aa7.01□□□□□ -1.29
HOTAIRM1-202ENST00000428939 LIMD2Q9BT23 127 aa7.01□□□□□ -1.29
HOTAIRM1-202ENST00000428939 SPINK1P00995 79 aa7□□□□□ -1.29
HOTAIRM1-202ENST00000428939 CXCL6P80162 114 aa6.99□□□□□ -1.29
HOTAIRM1-202ENST00000428939 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
HOTAIRM1-202ENST00000428939 Q5XG85 94 aa6.97□□□□□ -1.29
HOTAIRM1-202ENST00000428939 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
HOTAIRM1-202ENST00000428939 J3KT08 172 aa6.96□□□□□ -1.3
HOTAIRM1-202ENST00000428939 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
HOTAIRM1-202ENST00000428939 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
HOTAIRM1-202ENST00000428939 DEFB116Q30KQ4 102 aa6.95□□□□□ -1.3
HOTAIRM1-202ENST00000428939 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms