RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
SMC6-204ENST00000428868 TEN1Q86WV5 123 aa5.35□□□□□ -1.55
SMC6-204ENST00000428868 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
SMC6-204ENST00000428868 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
SMC6-204ENST00000428868 TMEM256-PLSCR3K7ERE1 68 aa5.33□□□□□ -1.56
SMC6-204ENST00000428868 CDK2AP2O75956 126 aa5.33□□□□□ -1.56
SMC6-204ENST00000428868 SPRR1BP22528 89 aa5.33□□□□□ -1.56
SMC6-204ENST00000428868 NDUFV3P56181 108 aaKnown RBP5.33□□□□□ -1.56
SMC6-204ENST00000428868 OCIAD2Q56VL3 154 aa5.33□□□□□ -1.56
SMC6-204ENST00000428868 OBSCN-AS1Q96MR7 158 aa5.33□□□□□ -1.56
SMC6-204ENST00000428868 HERC1Q15751 4861 aa5.33□□□□□ -1.56
SMC6-204ENST00000428868 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
SMC6-204ENST00000428868 C14orf132Q9NPU4 83 aa5.32□□□□□ -1.56
SMC6-204ENST00000428868 LAMTOR3Q9UHA4 124 aa5.32□□□□□ -1.56
SMC6-204ENST00000428868 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
SMC6-204ENST00000428868 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
SMC6-204ENST00000428868 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
SMC6-204ENST00000428868 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
SMC6-204ENST00000428868 Q5VSD8 79 aa5.29□□□□□ -1.56
SMC6-204ENST00000428868 LRP1Q07954 4544 aaKnown RBP5.28□□□□□ -1.56
SMC6-204ENST00000428868 A0A087X002 238 aa5.28□□□□□ -1.56
SMC6-204ENST00000428868 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
SMC6-204ENST00000428868 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
SMC6-204ENST00000428868 H3BQ85 93 aa5.28□□□□□ -1.56
SMC6-204ENST00000428868 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
SMC6-204ENST00000428868 ZNF706Q9Y5V0 76 aaPredicted RBP5.28□□□□□ -1.56
SMC6-204ENST00000428868 TRBV7-4A0A0J9YYF1 115 aa5.27□□□□□ -1.57
SMC6-204ENST00000428868 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
SMC6-204ENST00000428868 RBM3P98179 157 aaKnown RBP5.27□□□□□ -1.57
SMC6-204ENST00000428868 Q6ZQT0 140 aa5.27□□□□□ -1.57
SMC6-204ENST00000428868 GHRHP01286 108 aa5.26□□□□□ -1.57
SMC6-204ENST00000428868 KRTAP13-2Q52LG2 175 aa5.26□□□□□ -1.57
SMC6-204ENST00000428868 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
SMC6-204ENST00000428868 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
SMC6-204ENST00000428868 TNXBP22105 4242 aa5.26□□□□□ -1.57
SMC6-204ENST00000428868 IGLV8-61A0A075B6I0 122 aa5.25□□□□□ -1.57
SMC6-204ENST00000428868 LOC110117498A0A087WWA1 95 aa5.25□□□□□ -1.57
SMC6-204ENST00000428868 A0A1W2PNM2 257 aa5.25□□□□□ -1.57
SMC6-204ENST00000428868 MOBPQ13875 183 aa5.25□□□□□ -1.57
SMC6-204ENST00000428868 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
SMC6-204ENST00000428868 F8WEM9 126 aa5.24□□□□□ -1.57
SMC6-204ENST00000428868 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
SMC6-204ENST00000428868 VPS25Q9BRG1 176 aa5.24□□□□□ -1.57
SMC6-204ENST00000428868 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
SMC6-204ENST00000428868 CCKP06307 115 aa5.23□□□□□ -1.57
SMC6-204ENST00000428868 Q8N1X5 172 aa5.23□□□□□ -1.57
SMC6-204ENST00000428868 DSCR8Q96T75 97 aa5.23□□□□□ -1.57
SMC6-204ENST00000428868 FAM229BQ4G0N7 80 aa5.21□□□□□ -1.58
SMC6-204ENST00000428868 PRR26Q8N8Z3 221 aa5.21□□□□□ -1.58
SMC6-204ENST00000428868 Q8NBF4 154 aa5.21□□□□□ -1.58
SMC6-204ENST00000428868 K7ERU9 68 aa5.2□□□□□ -1.58
SMC6-204ENST00000428868 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
SMC6-204ENST00000428868 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
SMC6-204ENST00000428868 Q6JHZ5 121 aa5.19□□□□□ -1.58
SMC6-204ENST00000428868 CDIP1Q9H305 208 aa5.19□□□□□ -1.58
SMC6-204ENST00000428868 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
SMC6-204ENST00000428868 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
SMC6-204ENST00000428868 CRYGAP11844 174 aa5.18□□□□□ -1.58
SMC6-204ENST00000428868 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
SMC6-204ENST00000428868 FAM240AA0A1B0GVK7 77 aa5.17□□□□□ -1.58
SMC6-204ENST00000428868 J3QR89 54 aa5.17□□□□□ -1.58
SMC6-204ENST00000428868 PDE6GP18545 87 aa5.17□□□□□ -1.58
SMC6-204ENST00000428868 A0A087WSZ3 146 aa5.16□□□□□ -1.58
SMC6-204ENST00000428868 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
SMC6-204ENST00000428868 DMBT1Q9UGM3 2413 aaPredicted RBP5.16□□□□□ -1.58
SMC6-204ENST00000428868 TRBV7-7A0A0K0K1E9 115 aa5.15□□□□□ -1.59
SMC6-204ENST00000428868 Q6Q795 121 aa5.15□□□□□ -1.59
SMC6-204ENST00000428868 SSBP3-AS1Q7Z2R9 100 aa5.15□□□□□ -1.59
SMC6-204ENST00000428868 Q6ZVQ6 151 aa5.14□□□□□ -1.59
SMC6-204ENST00000428868 ACYP1P07311 99 aa5.13□□□□□ -1.59
SMC6-204ENST00000428868 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
SMC6-204ENST00000428868 DEFB116Q30KQ4 102 aa5.11□□□□□ -1.59
SMC6-204ENST00000428868 IGKV3D-7A0A0C4DH55 119 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 CD164Q04900 197 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 C21orf62-AS1Q17RA5 79 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 LINC00304Q8N9R0 145 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 Q96NJ1 140 aa5.1□□□□□ -1.59
SMC6-204ENST00000428868 A0A1B0GW54 56 aa5.08□□□□□ -1.6
SMC6-204ENST00000428868 NREPQ16612 68 aa5.08□□□□□ -1.6
SMC6-204ENST00000428868 UBL5Q9BZL1 73 aa5.08□□□□□ -1.6
SMC6-204ENST00000428868 LINC00472Q9H8W2 130 aa5.08□□□□□ -1.6
SMC6-204ENST00000428868 J3QL48 77 aa5.07□□□□□ -1.6
SMC6-204ENST00000428868 LINC00643Q86TS7 51 aa5.07□□□□□ -1.6
SMC6-204ENST00000428868 Q8N9L7 120 aa5.06□□□□□ -1.6
SMC6-204ENST00000428868 BPY2O14599 106 aa5.05□□□□□ -1.6
SMC6-204ENST00000428868 DSCR10P59022 87 aa5.05□□□□□ -1.6
SMC6-204ENST00000428868 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
SMC6-204ENST00000428868 SPINK1P00995 79 aa5.04□□□□□ -1.6
SMC6-204ENST00000428868 C1orf195Q5TG92 126 aa5.04□□□□□ -1.6
SMC6-204ENST00000428868 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
SMC6-204ENST00000428868 A0A087WVE0 104 aa5.03□□□□□ -1.6
SMC6-204ENST00000428868 K7EQZ3 153 aa5.03□□□□□ -1.6
SMC6-204ENST00000428868 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
SMC6-204ENST00000428868 Q5XG85 94 aa5.03□□□□□ -1.6
SMC6-204ENST00000428868 SIGMAR1Q99720 223 aa5.03□□□□□ -1.6
SMC6-204ENST00000428868 RETNLBQ9BQ08 111 aa5.03□□□□□ -1.6
SMC6-204ENST00000428868 IGKV4-1P06312 121 aa5.02□□□□□ -1.61
SMC6-204ENST00000428868 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms