RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 C14orf144Q96I85 54 aa14.7□□□□□ -0.06
LMO1-202ENST00000428101 LINC00575Q6W349 94 aa14.68□□□□□ -0.06
LMO1-202ENST00000428101 HIST1H4GQ99525 98 aa14.68□□□□□ -0.06
LMO1-202ENST00000428101 KRTAP9-6A0A140TA67 174 aa14.67□□□□□ -0.06
LMO1-202ENST00000428101 VAMP3Q15836 100 aa14.67□□□□□ -0.06
LMO1-202ENST00000428101 PYY3Q5JQD4 70 aa14.64□□□□□ -0.07
LMO1-202ENST00000428101 HIGD1BQ9P298 99 aa14.62□□□□□ -0.07
LMO1-202ENST00000428101 hADV29S1A0JD25 119 aa14.61□□□□□ -0.07
LMO1-202ENST00000428101 Q6ZQY7 126 aa14.61□□□□□ -0.07
LMO1-202ENST00000428101 F8WEM9 126 aa14.6□□□□□ -0.07
LMO1-202ENST00000428101 TCL1BO95988 128 aa14.6□□□□□ -0.07
LMO1-202ENST00000428101 LCE2DQ5TA82 110 aaPredicted RBP14.58□□□□□ -0.08
LMO1-202ENST00000428101 MT1HP80294 61 aa14.57□□□□□ -0.08
LMO1-202ENST00000428101 C2orf91Q6ZV80 131 aa14.57□□□□□ -0.08
LMO1-202ENST00000428101 RPL37P61927 97 aaKnown RBP14.56□□□□□ -0.08
LMO1-202ENST00000428101 C12orf57Q99622 126 aa14.55□□□□□ -0.08
LMO1-202ENST00000428101 Q6JHZ5 121 aa14.52□□□□□ -0.09
LMO1-202ENST00000428101 IGFL1Q6UW32 110 aa14.52□□□□□ -0.09
LMO1-202ENST00000428101 CLEC2BQ92478 149 aa14.51□□□□□ -0.09
LMO1-202ENST00000428101 OCIAD2Q56VL3 154 aa14.5□□□□□ -0.09
LMO1-202ENST00000428101 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.5□□□□□ -0.09
LMO1-202ENST00000428101 TRBV7-7A0A0K0K1E9 115 aa14.49□□□□□ -0.09
LMO1-202ENST00000428101 CFC1BP0CG36 223 aa14.47□□□□□ -0.09
LMO1-202ENST00000428101 CFC1P0CG37 223 aa14.47□□□□□ -0.09
LMO1-202ENST00000428101 BVES-AS1Q5T3Y7 98 aa14.47□□□□□ -0.09
LMO1-202ENST00000428101 CEND1Q8N111 149 aa14.46□□□□□ -0.09
LMO1-202ENST00000428101 RAB37Q96AX2 223 aa14.45□□□□□ -0.1
LMO1-202ENST00000428101 PPDPFLQ8WWR9 84 aa14.44□□□□□ -0.1
LMO1-202ENST00000428101 A0A0B4J2C4 111 aa14.43□□□□□ -0.1
LMO1-202ENST00000428101 TMEM238LA0A1B0GVL6 79 aa14.41□□□□□ -0.1
LMO1-202ENST00000428101 A6NJY4 79 aa14.41□□□□□ -0.1
LMO1-202ENST00000428101 SNHG12Q9BXW3 62 aa14.4□□□□□ -0.1
LMO1-202ENST00000428101 UQCR10Q9UDW1 63 aa14.38□□□□□ -0.11
LMO1-202ENST00000428101 H3BUT2 72 aa14.37□□□□□ -0.11
LMO1-202ENST00000428101 HSD52Q0P140 79 aa14.37□□□□□ -0.11
LMO1-202ENST00000428101 FXYD2P54710 66 aa14.36□□□□□ -0.11
LMO1-202ENST00000428101 LORP23490 312 aaPredicted RBP14.33□□□□□ -0.12
LMO1-202ENST00000428101 PRO1854Q9UHT4 67 aa14.33□□□□□ -0.12
LMO1-202ENST00000428101 OBSCN-AS1Q96MR7 158 aa14.32□□□□□ -0.12
LMO1-202ENST00000428101 FLGP20930 4061 aaPredicted RBP14.31□□□□□ -0.12
LMO1-202ENST00000428101 KRTAP10-6P60371 365 aaPredicted RBP14.31□□□□□ -0.12
LMO1-202ENST00000428101 FSIP2Q5CZC0 6907 aa14.3□□□□□ -0.12
LMO1-202ENST00000428101 FAM218AQ96MZ4 157 aa14.3□□□□□ -0.12
LMO1-202ENST00000428101 LST1O00453 97 aa14.28□□□□□ -0.12
LMO1-202ENST00000428101 H0YGX0 51 aa14.27□□□□□ -0.13
LMO1-202ENST00000428101 COX6B2Q6YFQ2 88 aa14.27□□□□□ -0.13
LMO1-202ENST00000428101 Q75L30 129 aa14.27□□□□□ -0.13
LMO1-202ENST00000428101 Q6Q795 121 aa14.26□□□□□ -0.13
LMO1-202ENST00000428101 CRCT1Q9UGL9 99 aa14.26□□□□□ -0.13
LMO1-202ENST00000428101 SNCGO76070 127 aa14.23□□□□□ -0.13
LMO1-202ENST00000428101 SMIM6P0DI80 62 aa14.23□□□□□ -0.13
LMO1-202ENST00000428101 NDUFV3P56181 108 aaKnown RBP14.23□□□□□ -0.13
LMO1-202ENST00000428101 M0R2T5 61 aa14.22□□□□□ -0.13
LMO1-202ENST00000428101 ATP11AUNQ6ZP68 121 aa14.22□□□□□ -0.13
LMO1-202ENST00000428101 TEN1Q86WV5 123 aa14.2□□□□□ -0.14
LMO1-202ENST00000428101 SS18L2Q9UHA2 77 aa14.19□□□□□ -0.14
LMO1-202ENST00000428101 K7ERJ3 54 aa14.18□□□□□ -0.14
LMO1-202ENST00000428101 TRIAP1O43715 76 aa14.17□□□□□ -0.14
LMO1-202ENST00000428101 Q96NJ1 140 aa14.17□□□□□ -0.14
LMO1-202ENST00000428101 A0A1B0GX51 115 aa14.14□□□□□ -0.15
LMO1-202ENST00000428101 A0A087WSZ3 146 aa14.13□□□□□ -0.15
LMO1-202ENST00000428101 H3BMG7 143 aa14.13□□□□□ -0.15
LMO1-202ENST00000428101 PSMB2P49721 201 aa14.12□□□□□ -0.15
LMO1-202ENST00000428101 C20orf166-AS1Q96NR2 134 aa14.11□□□□□ -0.15
LMO1-202ENST00000428101 LOC105371267A0A1B0GV96 52 aa14.1□□□□□ -0.15
LMO1-202ENST00000428101 FABP2P12104 132 aa14.09□□□□□ -0.15
LMO1-202ENST00000428101 COX6CP09669 75 aa14.08□□□□□ -0.16
LMO1-202ENST00000428101 A8MUU9 505 aa14.07□□□□□ -0.16
LMO1-202ENST00000428101 GHRHP01286 108 aa14.07□□□□□ -0.16
LMO1-202ENST00000428101 A0A1W2PNM2 257 aa14.05□□□□□ -0.16
LMO1-202ENST00000428101 M0R143 59 aa14.04□□□□□ -0.16
LMO1-202ENST00000428101 TSTD3H0UI37 97 aa14□□□□□ -0.17
LMO1-202ENST00000428101 DNAL4O96015 105 aa14□□□□□ -0.17
LMO1-202ENST00000428101 DSCR10P59022 87 aa13.98□□□□□ -0.17
LMO1-202ENST00000428101 SCGB1C2P0DMR2 95 aa13.95□□□□□ -0.18
LMO1-202ENST00000428101 ORMDL1Q9P0S3 153 aa13.95□□□□□ -0.18
LMO1-202ENST00000428101 H3BQ85 93 aa13.94□□□□□ -0.18
LMO1-202ENST00000428101 ANKRD29Q8N6D5 301 aa13.94□□□□□ -0.18
LMO1-202ENST00000428101 SIGMAR1Q99720 223 aa13.93□□□□□ -0.18
LMO1-202ENST00000428101 TRBV7-4A0A0J9YYF1 115 aa13.92□□□□□ -0.18
LMO1-202ENST00000428101 A0A1B0GV72 72 aa13.91□□□□□ -0.18
LMO1-202ENST00000428101 TRACP01848 142 aa13.89□□□□□ -0.19
LMO1-202ENST00000428101 TMEM256-PLSCR3K7ERE1 68 aa13.88□□□□□ -0.19
LMO1-202ENST00000428101 IGKV4-1P06312 121 aa13.88□□□□□ -0.19
LMO1-202ENST00000428101 KRTAP16-1A8MUX0 517 aa13.87□□□□□ -0.19
LMO1-202ENST00000428101 LINC00313P59037 77 aa13.87□□□□□ -0.19
LMO1-202ENST00000428101 TRBV20-1A0A075B6N2 111 aa13.84□□□□□ -0.19
LMO1-202ENST00000428101 NOTCH2NLQ7Z3S9 236 aa13.84□□□□□ -0.19
LMO1-202ENST00000428101 LINC00472Q9H8W2 130 aa13.83□□□□□ -0.2
LMO1-202ENST00000428101 CCKP06307 115 aa13.81□□□□□ -0.2
LMO1-202ENST00000428101 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
LMO1-202ENST00000428101 UBE2V1Q13404 147 aa13.8□□□□□ -0.2
LMO1-202ENST00000428101 BATFQ16520 125 aa13.8□□□□□ -0.2
LMO1-202ENST00000428101 NAA38Q9BRA0 125 aaKnown RBP13.8□□□□□ -0.2
LMO1-202ENST00000428101 KRTAP9-8Q9BYQ0 159 aa13.77□□□□□ -0.21
LMO1-202ENST00000428101 ATXN8Q156A1 80 aa13.75□□□□□ -0.21
LMO1-202ENST00000428101 LYRM7Q5U5X0 104 aa13.72□□□□□ -0.21
LMO1-202ENST00000428101 IGHV6-1A0A0B4J1U7 121 aa13.71□□□□□ -0.21
LMO1-202ENST00000428101 BAALC-AS2P0C853 105 aa13.71□□□□□ -0.21
LMO1-202ENST00000428101 HRES1P13985 223 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms