RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
PSPC1-202ENST00000427943 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
PSPC1-202ENST00000427943 COX8AP10176 69 aa9.95□□□□□ -0.82
PSPC1-202ENST00000427943 TCL1BO95988 128 aa9.92□□□□□ -0.82
PSPC1-202ENST00000427943 BVES-AS1Q5T3Y7 98 aa9.91□□□□□ -0.82
PSPC1-202ENST00000427943 LCE2CQ5TA81 110 aa9.9□□□□□ -0.82
PSPC1-202ENST00000427943 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
PSPC1-202ENST00000427943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.9□□□□□ -0.82
PSPC1-202ENST00000427943 CLEC2BQ92478 149 aa9.9□□□□□ -0.82
PSPC1-202ENST00000427943 Q6JHZ5 121 aa9.89□□□□□ -0.83
PSPC1-202ENST00000427943 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
PSPC1-202ENST00000427943 DLEU1O43261 78 aa9.88□□□□□ -0.83
PSPC1-202ENST00000427943 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
PSPC1-202ENST00000427943 PAM16Q9Y3D7 125 aa9.88□□□□□ -0.83
PSPC1-202ENST00000427943 TRBV7-7A0A0K0K1E9 115 aa9.87□□□□□ -0.83
PSPC1-202ENST00000427943 OCIAD2Q56VL3 154 aa9.87□□□□□ -0.83
PSPC1-202ENST00000427943 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
PSPC1-202ENST00000427943 CFC1P0CG37 223 aa9.86□□□□□ -0.83
PSPC1-202ENST00000427943 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
PSPC1-202ENST00000427943 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
PSPC1-202ENST00000427943 RAB37Q96AX2 223 aa9.85□□□□□ -0.83
PSPC1-202ENST00000427943 H3BUT2 72 aa9.84□□□□□ -0.83
PSPC1-202ENST00000427943 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
PSPC1-202ENST00000427943 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
PSPC1-202ENST00000427943 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
PSPC1-202ENST00000427943 VAMP8Q9BV40 100 aa9.82□□□□□ -0.84
PSPC1-202ENST00000427943 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
PSPC1-202ENST00000427943 A0A0B4J2C4 111 aa9.81□□□□□ -0.84
PSPC1-202ENST00000427943 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
PSPC1-202ENST00000427943 MT1HP80294 61 aa9.79□□□□□ -0.84
PSPC1-202ENST00000427943 KRTAP9-6A0A140TA67 174 aa9.76□□□□□ -0.85
PSPC1-202ENST00000427943 H0YGX0 51 aa9.76□□□□□ -0.85
PSPC1-202ENST00000427943 CEND1Q8N111 149 aa9.75□□□□□ -0.85
PSPC1-202ENST00000427943 SNCGO76070 127 aa9.74□□□□□ -0.85
PSPC1-202ENST00000427943 OBSCN-AS1Q96MR7 158 aa9.74□□□□□ -0.85
PSPC1-202ENST00000427943 LST1O00453 97 aa9.73□□□□□ -0.85
PSPC1-202ENST00000427943 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
PSPC1-202ENST00000427943 FXYD2P54710 66 aa9.72□□□□□ -0.85
PSPC1-202ENST00000427943 PRO1854Q9UHT4 67 aa9.72□□□□□ -0.85
PSPC1-202ENST00000427943 TMEM238LA0A1B0GVL6 79 aa9.71□□□□□ -0.86
PSPC1-202ENST00000427943 A6NJY4 79 aa9.71□□□□□ -0.86
PSPC1-202ENST00000427943 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
PSPC1-202ENST00000427943 Q6Q795 121 aa9.69□□□□□ -0.86
PSPC1-202ENST00000427943 SS18L2Q9UHA2 77 aa9.69□□□□□ -0.86
PSPC1-202ENST00000427943 TRIAP1O43715 76 aa9.68□□□□□ -0.86
PSPC1-202ENST00000427943 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
PSPC1-202ENST00000427943 FABP2P12104 132 aa9.67□□□□□ -0.86
PSPC1-202ENST00000427943 TEN1Q86WV5 123 aa9.67□□□□□ -0.86
PSPC1-202ENST00000427943 A0A087WSZ3 146 aa9.66□□□□□ -0.86
PSPC1-202ENST00000427943 A0A1B0GX51 115 aa9.66□□□□□ -0.86
PSPC1-202ENST00000427943 H3BMG7 143 aa9.66□□□□□ -0.86
PSPC1-202ENST00000427943 Q75L30 129 aa9.66□□□□□ -0.86
PSPC1-202ENST00000427943 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
PSPC1-202ENST00000427943 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
PSPC1-202ENST00000427943 Q96NJ1 140 aa9.64□□□□□ -0.87
PSPC1-202ENST00000427943 K7ERJ3 54 aa9.62□□□□□ -0.87
PSPC1-202ENST00000427943 M0R2T5 61 aa9.62□□□□□ -0.87
PSPC1-202ENST00000427943 GHRHP01286 108 aa9.61□□□□□ -0.87
PSPC1-202ENST00000427943 KRTAP10-6P60371 365 aaPredicted RBP9.61□□□□□ -0.87
PSPC1-202ENST00000427943 HSD52Q0P140 79 aa9.61□□□□□ -0.87
PSPC1-202ENST00000427943 A0A1B0GV72 72 aa9.6□□□□□ -0.87
PSPC1-202ENST00000427943 SMIM6P0DI80 62 aa9.6□□□□□ -0.87
PSPC1-202ENST00000427943 LORP23490 312 aaPredicted RBP9.6□□□□□ -0.87
PSPC1-202ENST00000427943 A0A1W2PNM2 257 aa9.59□□□□□ -0.87
PSPC1-202ENST00000427943 DNAL4O96015 105 aa9.59□□□□□ -0.87
PSPC1-202ENST00000427943 PSMB2P49721 201 aa9.59□□□□□ -0.87
PSPC1-202ENST00000427943 FLGP20930 4061 aaPredicted RBP9.58□□□□□ -0.88
PSPC1-202ENST00000427943 ORMDL1Q9P0S3 153 aa9.57□□□□□ -0.88
PSPC1-202ENST00000427943 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
PSPC1-202ENST00000427943 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
PSPC1-202ENST00000427943 DSCR10P59022 87 aa9.55□□□□□ -0.88
PSPC1-202ENST00000427943 A8MUU9 505 aa9.54□□□□□ -0.88
PSPC1-202ENST00000427943 ANKRD29Q8N6D5 301 aa9.53□□□□□ -0.88
PSPC1-202ENST00000427943 COX6CP09669 75 aa9.51□□□□□ -0.89
PSPC1-202ENST00000427943 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
PSPC1-202ENST00000427943 UQCR10Q9UDW1 63 aa9.5□□□□□ -0.89
PSPC1-202ENST00000427943 CRCT1Q9UGL9 99 aa9.5□□□□□ -0.89
PSPC1-202ENST00000427943 TRBV7-4A0A0J9YYF1 115 aa9.49□□□□□ -0.89
PSPC1-202ENST00000427943 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
PSPC1-202ENST00000427943 H3BQ85 93 aa9.49□□□□□ -0.89
PSPC1-202ENST00000427943 IGKV4-1P06312 121 aa9.49□□□□□ -0.89
PSPC1-202ENST00000427943 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
PSPC1-202ENST00000427943 CCKP06307 115 aa9.46□□□□□ -0.9
PSPC1-202ENST00000427943 DEFB116Q30KQ4 102 aa9.46□□□□□ -0.9
PSPC1-202ENST00000427943 TRACP01848 142 aa9.45□□□□□ -0.9
PSPC1-202ENST00000427943 LINC00313P59037 77 aa9.44□□□□□ -0.9
PSPC1-202ENST00000427943 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
PSPC1-202ENST00000427943 UBE2V1Q13404 147 aa9.43□□□□□ -0.9
PSPC1-202ENST00000427943 SCGB1C2P0DMR2 95 aa9.41□□□□□ -0.9
PSPC1-202ENST00000427943 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
PSPC1-202ENST00000427943 VPS25Q9BRG1 176 aa9.41□□□□□ -0.9
PSPC1-202ENST00000427943 LINC00472Q9H8W2 130 aa9.4□□□□□ -0.9
PSPC1-202ENST00000427943 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
PSPC1-202ENST00000427943 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
PSPC1-202ENST00000427943 RBM3P98179 157 aaKnown RBP9.35□□□□□ -0.91
PSPC1-202ENST00000427943 DSCR8Q96T75 97 aa9.34□□□□□ -0.91
PSPC1-202ENST00000427943 BAALC-AS2P0C853 105 aa9.31□□□□□ -0.92
PSPC1-202ENST00000427943 A0A1B0GVX0 72 aa9.3□□□□□ -0.92
PSPC1-202ENST00000427943 TSTD3H0UI37 97 aa9.3□□□□□ -0.92
PSPC1-202ENST00000427943 NAA38Q9BRA0 125 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms