RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 C1orf137Q5JT78 98 aa16.32■□□□□ 0.2
SH3GL3-202ENST00000427482 F8WEM9 126 aa16.31■□□□□ 0.2
SH3GL3-202ENST00000427482 KRTAP10-1P60331 282 aa16.3■□□□□ 0.2
SH3GL3-202ENST00000427482 Q6ZSA8 131 aa16.3■□□□□ 0.2
SH3GL3-202ENST00000427482 IGKV3D-7A0A0C4DH55 119 aa16.28■□□□□ 0.2
SH3GL3-202ENST00000427482 CIRBP-AS1Q8TBR5 109 aa16.28■□□□□ 0.2
SH3GL3-202ENST00000427482 Q6ZVQ6 151 aa16.27■□□□□ 0.2
SH3GL3-202ENST00000427482 IGLV8-61A0A075B6I0 122 aa16.26■□□□□ 0.19
SH3GL3-202ENST00000427482 ATP5EP2Q5VTU8 51 aa16.26■□□□□ 0.19
SH3GL3-202ENST00000427482 A0A1W2PNM2 257 aa16.25■□□□□ 0.19
SH3GL3-202ENST00000427482 SCXQ7RTU7 201 aa16.23■□□□□ 0.19
SH3GL3-202ENST00000427482 Q8NBF4 154 aa16.23■□□□□ 0.19
SH3GL3-202ENST00000427482 SRRM2Q9UQ35 2752 aaKnown RBP16.21■□□□□ 0.19
SH3GL3-202ENST00000427482 A0A1B0GW54 56 aa16.21■□□□□ 0.19
SH3GL3-202ENST00000427482 ZNF861PO60384 105 aa16.2■□□□□ 0.18
SH3GL3-202ENST00000427482 IGFL1Q6UW32 110 aa16.19■□□□□ 0.18
SH3GL3-202ENST00000427482 LINC00336Q6ZUF6 198 aa16.19■□□□□ 0.18
SH3GL3-202ENST00000427482 SPRR4Q96PI1 79 aa16.19■□□□□ 0.18
SH3GL3-202ENST00000427482 IGLV7-43P04211 117 aa16.15■□□□□ 0.18
SH3GL3-202ENST00000427482 ZNF706Q9Y5V0 76 aaPredicted RBP16.15■□□□□ 0.18
SH3GL3-202ENST00000427482 HAMPP81172 84 aa16.14■□□□□ 0.17
SH3GL3-202ENST00000427482 LINC00483Q53H64 154 aa16.14■□□□□ 0.17
SH3GL3-202ENST00000427482 A0A0G2JQZ4 141 aa16.12■□□□□ 0.17
SH3GL3-202ENST00000427482 CRYGAP11844 174 aa16.11■□□□□ 0.17
SH3GL3-202ENST00000427482 CXCL6P80162 114 aa16.1■□□□□ 0.17
SH3GL3-202ENST00000427482 NREPQ16612 68 aa16.1■□□□□ 0.17
SH3GL3-202ENST00000427482 FAM236AA0A1B0GUQ0 79 aa16.1■□□□□ 0.17
SH3GL3-202ENST00000427482 FAM236BA0A1B0GV22 79 aa16.1■□□□□ 0.17
SH3GL3-202ENST00000427482 HIST1H4AP62805 103 aaKnown RBP16.06■□□□□ 0.16
SH3GL3-202ENST00000427482 A0A087WVE0 104 aa16.05■□□□□ 0.16
SH3GL3-202ENST00000427482 A0A1B0GVY2 172 aa16.03■□□□□ 0.16
SH3GL3-202ENST00000427482 ANAPC13Q9BS18 74 aa16.03■□□□□ 0.16
SH3GL3-202ENST00000427482 RYR2Q92736 4967 aa16.03■□□□□ 0.16
SH3GL3-202ENST00000427482 IGLV9-49A0A0B4J1Y8 123 aa15.99■□□□□ 0.15
SH3GL3-202ENST00000427482 C9orf153Q5TBE3 101 aa15.98■□□□□ 0.15
SH3GL3-202ENST00000427482 BPY2O14599 106 aa15.96■□□□□ 0.14
SH3GL3-202ENST00000427482 RPL37AP61513 92 aaKnown RBP15.96■□□□□ 0.14
SH3GL3-202ENST00000427482 PKHD1P08F94 4074 aa15.95■□□□□ 0.14
SH3GL3-202ENST00000427482 ANAPC11Q9NYG5 84 aa15.95■□□□□ 0.14
SH3GL3-202ENST00000427482 A0A087WSZ3 146 aa15.94■□□□□ 0.14
SH3GL3-202ENST00000427482 LRP1BQ9NZR2 4599 aa15.94■□□□□ 0.14
SH3GL3-202ENST00000427482 MOBPQ13875 183 aa15.89■□□□□ 0.13
SH3GL3-202ENST00000427482 KMT2CQ8NEZ4 4911 aaKnown RBP15.88■□□□□ 0.13
SH3GL3-202ENST00000427482 ATOX1O00244 68 aa15.87■□□□□ 0.13
SH3GL3-202ENST00000427482 IGKV4-1P06312 121 aa15.86■□□□□ 0.13
SH3GL3-202ENST00000427482 Q8N9L7 120 aa15.85■□□□□ 0.13
SH3GL3-202ENST00000427482 DYNC1H1Q14204 4646 aaKnown RBP15.84■□□□□ 0.13
SH3GL3-202ENST00000427482 DSCR10P59022 87 aa15.8■□□□□ 0.12
SH3GL3-202ENST00000427482 VPS13BQ7Z7G8 4022 aa15.78■□□□□ 0.12
SH3GL3-202ENST00000427482 DEFB116Q30KQ4 102 aa15.74■□□□□ 0.11
SH3GL3-202ENST00000427482 HRCT1Q6UXD1 115 aa15.74■□□□□ 0.11
SH3GL3-202ENST00000427482 LINC00472Q9H8W2 130 aa15.73■□□□□ 0.11
SH3GL3-202ENST00000427482 FAM229BQ4G0N7 80 aa15.72■□□□□ 0.11
SH3GL3-202ENST00000427482 CCDC179H3BU77 68 aa15.71■□□□□ 0.1
SH3GL3-202ENST00000427482 K7EQZ3 153 aa15.71■□□□□ 0.1
SH3GL3-202ENST00000427482 SSBP3-AS1Q7Z2R9 100 aa15.7■□□□□ 0.1
SH3GL3-202ENST00000427482 A0A087X002 238 aa15.68■□□□□ 0.1
SH3GL3-202ENST00000427482 KRTAP1-4P0C5Y4 121 aa15.68■□□□□ 0.1
SH3GL3-202ENST00000427482 SS18L2Q9UHA2 77 aa15.68■□□□□ 0.1
SH3GL3-202ENST00000427482 SERP2Q8N6R1 65 aa15.67■□□□□ 0.1
SH3GL3-202ENST00000427482 APOBP04114 4563 aaKnown RBP15.67■□□□□ 0.1
SH3GL3-202ENST00000427482 COX7CP15954 63 aa15.66■□□□□ 0.1
SH3GL3-202ENST00000427482 KRTAP13-2Q52LG2 175 aa15.66■□□□□ 0.1
SH3GL3-202ENST00000427482 SMR3BP02814 79 aaPredicted RBP15.65■□□□□ 0.1
SH3GL3-202ENST00000427482 UQCRQO14949 82 aa15.64■□□□□ 0.09
SH3GL3-202ENST00000427482 CD164Q04900 197 aa15.64■□□□□ 0.09
SH3GL3-202ENST00000427482 SPINK6Q6UWN8 80 aa15.63■□□□□ 0.09
SH3GL3-202ENST00000427482 Q96NJ1 140 aa15.63■□□□□ 0.09
SH3GL3-202ENST00000427482 J3KT08 172 aa15.61■□□□□ 0.09
SH3GL3-202ENST00000427482 SMIM20Q8N5G0 67 aa15.59■□□□□ 0.09
SH3GL3-202ENST00000427482 A8MWP4 228 aa15.59■□□□□ 0.09
SH3GL3-202ENST00000427482 TRAV7A0A075B6U4 112 aa15.57■□□□□ 0.08
SH3GL3-202ENST00000427482 KRTAP10-4P60372 401 aaPredicted RBP15.54■□□□□ 0.08
SH3GL3-202ENST00000427482 PRR15Q8IV56 129 aa15.54■□□□□ 0.08
SH3GL3-202ENST00000427482 PLA2G1BP04054 148 aaKnown RBP15.54■□□□□ 0.08
SH3GL3-202ENST00000427482 HCG22E2RYF7 251 aa15.53■□□□□ 0.08
SH3GL3-202ENST00000427482 RYR3Q15413 4870 aa15.52■□□□□ 0.07
SH3GL3-202ENST00000427482 OCR1Q9BZK8 76 aa15.46■□□□□ 0.07
SH3GL3-202ENST00000427482 NDUFB1O75438 58 aa15.45■□□□□ 0.06
SH3GL3-202ENST00000427482 ASB16-AS1Q495Z4 193 aa15.44■□□□□ 0.06
SH3GL3-202ENST00000427482 WFDC13Q8IUB5 93 aa15.43■□□□□ 0.06
SH3GL3-202ENST00000427482 TYMSOSQ8TAI1 123 aa15.43■□□□□ 0.06
SH3GL3-202ENST00000427482 FAT1Q14517 4588 aa15.42■□□□□ 0.06
SH3GL3-202ENST00000427482 KRTAP29-1A8MX34 341 aaPredicted RBP15.41■□□□□ 0.06
SH3GL3-202ENST00000427482 Q5XG85 94 aa15.4■□□□□ 0.06
SH3GL3-202ENST00000427482 CASC2Q6XLA1 102 aa15.38■□□□□ 0.05
SH3GL3-202ENST00000427482 MMP24-AS1A0A0U1RRL7 71 aa15.37■□□□□ 0.05
SH3GL3-202ENST00000427482 A0A1B0GVX0 72 aa15.36■□□□□ 0.05
SH3GL3-202ENST00000427482 CDK2AP2O75956 126 aa15.36■□□□□ 0.05
SH3GL3-202ENST00000427482 PRR26Q8N8Z3 221 aa15.36■□□□□ 0.05
SH3GL3-202ENST00000427482 C20orf197Q8N268 126 aa15.34■□□□□ 0.05
SH3GL3-202ENST00000427482 CYSTM1Q9H1C7 97 aa15.33■□□□□ 0.04
SH3GL3-202ENST00000427482 LIMD2Q9BT23 127 aa15.31■□□□□ 0.04
SH3GL3-202ENST00000427482 C4orf48Q5BLP8 95 aa15.31■□□□□ 0.04
SH3GL3-202ENST00000427482 IGHV6-1A0A0B4J1U7 121 aa15.3■□□□□ 0.04
SH3GL3-202ENST00000427482 C8orf17Q9NRJ1 99 aa15.3■□□□□ 0.04
SH3GL3-202ENST00000427482 PKHD1L1Q86WI1 4243 aa15.3■□□□□ 0.04
SH3GL3-202ENST00000427482 FAM229AH3BQW9 127 aa15.29■□□□□ 0.04
SH3GL3-202ENST00000427482 hDV103S1A0JD37 113 aa15.27■□□□□ 0.04
SH3GL3-202ENST00000427482 SPINK1P00995 79 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms